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Aliases for C7orf55-LUC7L2 Gene

Aliases for C7orf55-LUC7L2 Gene

  • C7orf55-LUC7L2 Readthrough 2 3 5

External Ids for C7orf55-LUC7L2 Gene

Previous GeneCards Identifiers for C7orf55-LUC7L2 Gene

  • GC07P139031
  • GC07P139036
  • GC07P139041
  • GC07P139342
  • GC07P139343

Summaries for C7orf55-LUC7L2 Gene

Entrez Gene Summary for C7orf55-LUC7L2 Gene

  • This locus represents naturally occurring readthrough transcription between the neighboring C7orf55 (chromosome 7 open reading frame 55) and LUC7L2 (LUC7-like 2) genes on chromosome 7. The readthrough transcript encodes a fusion protein that shares sequence identity with each individual gene product. [provided by RefSeq, Jul 2012]

GeneCards Summary for C7orf55-LUC7L2 Gene

C7orf55-LUC7L2 (C7orf55-LUC7L2 Readthrough) is a Protein Coding gene. GO annotations related to this gene include poly(A) RNA binding and mRNA binding. An important paralog of this gene is LUC7L3.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C7orf55-LUC7L2 Gene

Genomics for C7orf55-LUC7L2 Gene

Regulatory Elements for C7orf55-LUC7L2 Gene

Promoters for C7orf55-LUC7L2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around C7orf55-LUC7L2 on UCSC Golden Path with GeneCards custom track

Genomic Location for C7orf55-LUC7L2 Gene

Chromosome:
7
Start:
139,341,132 bp from pter
End:
139,423,457 bp from pter
Size:
82,326 bases
Orientation:
Plus strand

Genomic View for C7orf55-LUC7L2 Gene

Genes around C7orf55-LUC7L2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C7orf55-LUC7L2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C7orf55-LUC7L2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C7orf55-LUC7L2 Gene

Proteins for C7orf55-LUC7L2 Gene

  • Protein details for C7orf55-LUC7L2 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0A6YYC3
    Recommended name:
    Protein C7orf55-LUC7L2
    Protein Accession:
    A0A0A6YYC3

    Protein attributes for C7orf55-LUC7L2 Gene

    Size:
    389 amino acids
    Molecular mass:
    46229 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C7orf55-LUC7L2 Gene

Proteomics data for C7orf55-LUC7L2 Gene at MOPED

Protein Expression for C7orf55-LUC7L2 Gene

Post-translational modifications for C7orf55-LUC7L2 Gene

No Post-translational modifications

Other Protein References for C7orf55-LUC7L2 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C7orf55-LUC7L2 Gene

Domains & Families for C7orf55-LUC7L2 Gene

Protein Domains for C7orf55-LUC7L2 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C7orf55-LUC7L2: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C7orf55-LUC7L2 Gene

Function for C7orf55-LUC7L2 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for C7orf55-LUC7L2 Gene

Localization for C7orf55-LUC7L2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for C7orf55-LUC7L2 Gene

Pathways & Interactions for C7orf55-LUC7L2 Gene

SuperPathways for C7orf55-LUC7L2 Gene

No Data Available

Interacting Proteins for C7orf55-LUC7L2 Gene

Gene Ontology (GO) - Biological Process for C7orf55-LUC7L2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for C7orf55-LUC7L2 Gene

Drugs & Compounds for C7orf55-LUC7L2 Gene

No Compound Related Data Available

Transcripts for C7orf55-LUC7L2 Gene

mRNA/cDNA for C7orf55-LUC7L2 Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for C7orf55-LUC7L2 Gene

No ASD Table

Relevant External Links for C7orf55-LUC7L2 Gene

GeneLoc Exon Structure for
C7orf55-LUC7L2
ECgene alternative splicing isoforms for
C7orf55-LUC7L2

Expression for C7orf55-LUC7L2 Gene

mRNA expression in normal human tissues for C7orf55-LUC7L2 Gene

Protein differential expression in normal tissues from HIPED for C7orf55-LUC7L2 Gene

This gene is overexpressed in Peripheral blood mononuclear cells (11.1) and Heart (9.9).

Integrated Proteomics: protein expression in normal tissues and cell lines from MaxQB for C7orf55-LUC7L2 Gene



genes like me logo Genes that share expression patterns with C7orf55-LUC7L2: view

Protein tissue co-expression partners for C7orf55-LUC7L2 Gene

- Elite partner

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for C7orf55-LUC7L2 Gene

Orthologs for C7orf55-LUC7L2 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for C7orf55-LUC7L2 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia -- 36
  • 98 (a)
OneToMany
dog
(Canis familiaris)
Mammalia LUC7L2 36
  • 98 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 85 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Luc7l2 36
  • 95 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 93 (a)
OneToMany
chicken
(Gallus gallus)
Aves LUC7L2 36
  • 85 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 86 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii C1H7orf55 36
  • 59 (a)
OneToMany
fruit fly
(Drosophila melanogaster)
Insecta CG7564 36
  • 44 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea B0495.8 36
  • 33 (a)
OneToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes LUC7 36
  • 27 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 58 (a)
OneToMany
Species with no ortholog for C7orf55-LUC7L2:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for C7orf55-LUC7L2 Gene

ENSEMBL:
Gene Tree for C7orf55-LUC7L2 (if available)
TreeFam:
Gene Tree for C7orf55-LUC7L2 (if available)

Paralogs for C7orf55-LUC7L2 Gene

Paralogs for C7orf55-LUC7L2 Gene

(2) SIMAP similar genes for C7orf55-LUC7L2 Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with C7orf55-LUC7L2: view

Variants for C7orf55-LUC7L2 Gene

Variation tolerance for C7orf55-LUC7L2 Gene

Residual Variation Intolerance Score: 22.8% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for C7orf55-LUC7L2 Gene

HapMap Linkage Disequilibrium report
C7orf55-LUC7L2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for C7orf55-LUC7L2 Gene

Disorders for C7orf55-LUC7L2 Gene

Relevant External Links for C7orf55-LUC7L2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
C7orf55-LUC7L2

No disorders were found for C7orf55-LUC7L2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C7orf55-LUC7L2 Gene

Publications for C7orf55-LUC7L2 Gene

  1. Expression of conjoined genes: another mechanism for gene regulation in eukaryotes. (PMID: 20967262) Prakash T. … Taylor T.D. (PLoS ONE 2010) 3 67
  2. The DNA sequence of human chromosome 7. (PMID: 12853948) Hillier L.W. … Wilson R.K. (Nature 2003) 3
  3. Toward a complete human genome sequence. (PMID: 9847074) Sulston J.E. … Waterston R. (Genome Res. 1998) 3

Products for C7orf55-LUC7L2 Gene

Sources for C7orf55-LUC7L2 Gene

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