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Aliases for C7orf31 Gene

Aliases for C7orf31 Gene

  • Chromosome 7 Open Reading Frame 31 2 3

External Ids for C7orf31 Gene

Summaries for C7orf31 Gene

GeneCards Summary for C7orf31 Gene

C7orf31 (Chromosome 7 Open Reading Frame 31) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C7orf31 Gene

Genomics for C7orf31 Gene

Genomic Location for C7orf31 Gene

Start:
25,125,200 bp from pter
End:
25,180,356 bp from pter
Size:
55,157 bases
Orientation:
Minus strand

Genomic View for C7orf31 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C7orf31 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C7orf31 Gene

Regulatory Elements for C7orf31 Gene

Proteins for C7orf31 Gene

  • Protein details for C7orf31 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8N865-CG031_HUMAN
    Recommended name:
    Uncharacterized protein C7orf31
    Protein Accession:
    Q8N865
    Secondary Accessions:
    • A4D165
    • Q6MZV8
    • Q6P989
    • Q7LE28
    • Q86XK1
    • Q8N1H5
    • Q96BN4

    Protein attributes for C7orf31 Gene

    Size:
    590 amino acids
    Molecular mass:
    68464 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAP22338.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305}; Sequence=BAC05255.1; Type=Erroneous initiation; Evidence={ECO:0000305};

neXtProt entry for C7orf31 Gene

Proteomics data for C7orf31 Gene at MOPED

Post-translational modifications for C7orf31 Gene

No Post-translational modifications

Other Protein References for C7orf31 Gene

No data available for DME Specific Peptides for C7orf31 Gene

Domains for C7orf31 Gene

Protein Domains for C7orf31 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C7orf31: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C7orf31 Gene

Function for C7orf31 Gene

Gene Ontology (GO) - Molecular Function for C7orf31 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with C7orf31: view

miRNA for C7orf31 Gene

miRTarBase miRNAs that target C7orf31

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for C7orf31 Gene

Localization for C7orf31 Gene

Subcellular locations from UniProtKB/Swiss-Prot for C7orf31 Gene

Cytoplasm, cytoskeleton, microtubule organizing center, centrosome.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C7orf31 Gene COMPARTMENTS Subcellular localization image for C7orf31 gene
Compartment Confidence
cytosol 2
nucleus 2
mitochondrion 1
peroxisome 1

Gene Ontology (GO) - Cellular Components for C7orf31 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IEA --
GO:0005813 centrosome IDA 25074808
genes like me logo Genes that share ontologies with C7orf31: view

Pathways for C7orf31 Gene

SuperPathways for C7orf31 Gene

No Data Available

Interacting Proteins for C7orf31 Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000283905%0d%0a9606.ENSP00000287777%0d%0a
Selected Interacting proteins: ENSP00000283905 Q8N865-CG031_HUMAN for C7orf31 Gene via STRING UniProtKB

Gene Ontology (GO) - Biological Process for C7orf31 Gene

None

No data available for Pathways by source for C7orf31 Gene

Transcripts for C7orf31 Gene

Unigene Clusters for C7orf31 Gene

Chromosome 7 open reading frame 31:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C7orf31 Gene

ExUns: 1a · 1b · 1c · 1d ^ 2a · 2b ^ 3 ^ 4 ^ 5a · 5b ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11
SP1: - - - -
SP2: - -
SP3: - -
SP4: - - -
SP5: -

Relevant External Links for C7orf31 Gene

GeneLoc Exon Structure for
C7orf31
ECgene alternative splicing isoforms for
C7orf31

Expression for C7orf31 Gene

mRNA expression in normal human tissues for C7orf31 Gene

mRNA differential expression in normal tissues according to GTEx for C7orf31 Gene

This gene is overexpressed in Testis (13.2).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for C7orf31 Gene

SOURCE GeneReport for Unigene cluster for C7orf31 Gene Hs.122055

genes like me logo Genes that share expressions with C7orf31: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for C7orf31 Gene

Orthologs for C7orf31 Gene

This gene was present in the common ancestor of chordates.

Orthologs for C7orf31 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C7H7orf31 35
  • 99.04 (n)
  • 98.14 (a)
C7orf31 36
  • 98 (a)
OneToOne
cow
(Bos Taurus)
Mammalia C4H7orf31 35
  • 86.82 (n)
  • 83.73 (a)
C7orf31 36
  • 84 (a)
OneToOne
dog
(Canis familiaris)
Mammalia C14H7orf31 35
  • 88.11 (n)
  • 84.13 (a)
C7orf31 36
  • 84 (a)
OneToOne
mouse
(Mus musculus)
Mammalia 4921507P07Rik 35
  • 79.76 (n)
  • 73.98 (a)
4921507P07Rik 16
4921507P07Rik 36
  • 74 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia C7orf31 36
  • 52 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia C7orf31 36
  • 52 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia LOC500124 35
  • 78.97 (n)
  • 72.96 (a)
chicken
(Gallus gallus)
Aves C2H7ORF31 35
  • 54.42 (n)
  • 42.75 (a)
C7orf31 36
  • 44 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia C7orf31 36
  • 30 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia LOC100497526 35
  • 51.15 (n)
  • 40 (a)
Species with no ortholog for C7orf31:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C7orf31 Gene

ENSEMBL:
Gene Tree for C7orf31 (if available)
TreeFam:
Gene Tree for C7orf31 (if available)

Paralogs for C7orf31 Gene

No data available for Paralogs for C7orf31 Gene

Variants for C7orf31 Gene

Sequence variations from dbSNP and Humsavar for C7orf31 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs956614 -- 25,154,024(-) GCTTC(C/G)CAGTC intron-variant
rs956615 -- 25,153,879(-) CAGAC(C/T)AGGCA intron-variant
rs957643 -- 25,152,056(-) ACTAG(A/G)GTTAA intron-variant
rs1034691 -- 25,162,750(-) CAAAT(C/T)CTAAG intron-variant
rs1080905 -- 25,127,946(+) ctata(G/T)ctttt intron-variant

Structural Variations from Database of Genomic Variants (DGV) for C7orf31 Gene

Variant ID Type Subtype PubMed ID
nsv7393 OTHER Inversion 18451855
nsv510075 CNV Loss 20534489

Relevant External Links for C7orf31 Gene

HapMap Linkage Disequilibrium report
C7orf31

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C7orf31 Gene

Disorders for C7orf31 Gene

Relevant External Links for C7orf31

Genetic Association Database (GAD)
C7orf31
genes like me logo Genes that share disorders with C7orf31: view

No data available for UniProtKB/Swiss-Prot for C7orf31 Gene

Publications for C7orf31 Gene

  1. Proteomic analysis of mammalian sperm cells identifies new components of the centrosome. (PMID: 25074808) Firat-Karalar E.N. … Stearns T. (J. Cell Sci. 2014) 2 3 4
  2. The DNA sequence of human chromosome 7. (PMID: 12853948) Hillier L.W. … Wilson R.K. (Nature 2003) 3 4
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  5. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) OlA!h J. … OvA!di J. (J. Biol. Chem. 2011) 3

Products for C7orf31 Gene

Sources for C7orf31 Gene

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