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Aliases for C7orf13 Gene

Subcategory (RNA class) for C7orf13 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for C7orf13 Gene

  • Chromosome 7 Open Reading Frame 13 3
  • MY040 3

External Ids for C7orf13 Gene

Summaries for C7orf13 Gene

GeneCards Summary for C7orf13 Gene

C7orf13 (Chromosome 7 Open Reading Frame 13) is a RNA Gene, and belongs to ncRNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C7orf13 Gene

Genomics for C7orf13 Gene

Genomic Location for C7orf13 Gene

Start:
156,638,366 bp from pter
End:
156,640,654 bp from pter
Size:
2,289 bases
Orientation:
Minus strand

Genomic View for C7orf13 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C7orf13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C7orf13 Gene

Regulatory Elements for C7orf13 Gene

Proteins for C7orf13 Gene

  • Protein details for C7orf13 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8NI28-CG013_HUMAN
    Recommended name:
    Uncharacterized protein C7orf13
    Protein Accession:
    Q8NI28
    Secondary Accessions:

    Protein attributes for C7orf13 Gene

    Size:
    216 amino acids
    Molecular mass:
    22304 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C7orf13 Gene

Proteomics data for C7orf13 Gene at MOPED

Post-translational modifications for C7orf13 Gene

No Post-translational modifications

No data available for DME Specific Peptides for C7orf13 Gene

Domains for C7orf13 Gene

Protein Domains for C7orf13 Gene

ProtoNet:
genes like me logo Genes that share domains with C7orf13: view

No data available for Gene Families and UniProtKB/Swiss-Prot for C7orf13 Gene

Function for C7orf13 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C7orf13 Gene

Localization for C7orf13 Gene

Subcellular locations from UniProtKB/Swiss-Prot for C7orf13 Gene

Membrane; Single-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C7orf13 Gene COMPARTMENTS Subcellular localization image for C7orf13 gene
Compartment Confidence
plasma membrane 3
cytosol 1
mitochondrion 1

Gene Ontology (GO) - Cellular Components for C7orf13 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with C7orf13: view

Pathways for C7orf13 Gene

SuperPathways for C7orf13 Gene

No Data Available

Interacting Proteins for C7orf13 Gene

Selected Interacting proteins: Q8NI28-CG013_HUMAN for C7orf13 Gene via MINT

Gene Ontology (GO) - Biological Process for C7orf13 Gene

None

No data available for Pathways by source for C7orf13 Gene

Transcripts for C7orf13 Gene

Unigene Clusters for C7orf13 Gene

Chromosome 7 open reading frame 13:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C7orf13 Gene

No ASD Table

Relevant External Links for C7orf13 Gene

GeneLoc Exon Structure for
C7orf13

Expression for C7orf13 Gene

mRNA expression in normal human tissues for C7orf13 Gene

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for C7orf13 Gene

SOURCE GeneReport for Unigene cluster for C7orf13 Gene Hs.647014

mRNA Expression by UniProt/SwissProt for C7orf13 Gene

Q8NI28-CG013_HUMAN
Tissue specificity: Expressed only in testis.
genes like me logo Genes that share expressions with C7orf13: view

Orthologs for C7orf13 Gene

No data available for Orthologs and Evolution for C7orf13 Gene

Paralogs for C7orf13 Gene

No data available for Paralogs for C7orf13 Gene

Variants for C7orf13 Gene

Sequence variations from dbSNP and Humsavar for C7orf13 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs9638048 -- 156,638,358(+) ATTCA(A/C)AATAT downstream-variant-500B
rs13231848 -- 156,638,289(+) AATTA(C/T)CACGT downstream-variant-500B
rs79378551 -- 156,638,023(+) GCATT(C/T)TGATC downstream-variant-500B
rs117645872 -- 156,638,126(+) AAAGC(A/C)ATAAG downstream-variant-500B
rs181430860 -- 156,638,240(+) AAGGG(A/G)ATGGA downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for C7orf13 Gene

Variant ID Type Subtype PubMed ID
nsv831198 CNV Loss 17160897

Relevant External Links for C7orf13 Gene

HapMap Linkage Disequilibrium report
C7orf13

Disorders for C7orf13 Gene

No disorders were found for C7orf13 Gene.

No data available for UniProtKB/Swiss-Prot for C7orf13 Gene

Publications for C7orf13 Gene

  1. A double RING-H2 domain in RNF32, a gene expressed during sperm formation. (PMID: 11890671) van Baren M.J. … Heutink P. (Biochem. Biophys. Res. Commun. 2002) 3 4
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer S.W. … Tsui L.-C. (Science 2003) 3
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for C7orf13 Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate C7orf13
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for C7orf13
    • Block miRNA regulation of C7orf13 using miScript Target Protectors

    Sources for C7orf13 Gene

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