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Aliases for C7orf13 Gene

Subcategory (RNA class) for C7orf13 Gene


Quality Score for this RNA gene is


Aliases for C7orf13 Gene

  • Chromosome 7 Open Reading Frame 13 3
  • MY040 3

External Ids for C7orf13 Gene

Previous GeneCards Identifiers for C7orf13 Gene

  • GC07M154661
  • GC07M155733
  • GC07M155848
  • GC07M155930
  • GC07M156124
  • GC07M156431
  • GC07M150163
  • GC07M156266

Summaries for C7orf13 Gene

GeneCards Summary for C7orf13 Gene

C7orf13 (Chromosome 7 Open Reading Frame 13) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for C7orf13 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C7orf13 Gene

Genomics for C7orf13 Gene

Regulatory Elements for C7orf13 Gene

Enhancers for C7orf13 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07H156638 1.1 ENCODE 33.4 +0.2 206 3.4 ARNT SIN3A YY1 ZNF766 ZNF143 SP3 ZC3H11A REST ZNF592 MEF2D C7orf13 NOM1 UBE3C RBM33 RNF32 LINC01006
GH07H156665 0.9 ENCODE 28.4 -26.6 -26581 4.1 PKNOX1 FOXA2 ATF1 ZFP64 ARID4B ZSCAN9 RARA FOS CREM HMG20B C7orf13 RNF32 LINC01006 LOC101927858 GC07M156670
GH07H156661 0.7 ENCODE 36.1 -21.7 -21659 1 ATF1 SOX6 TAL1 DPF2 ZNF592 TCF12 GATA2 NCOR1 POLR2A EGR1 C7orf13 RNF32 LINC01006 LOC101927858 GC07M156670
GH07H156614 1.6 FANTOM5 Ensembl ENCODE 10 +24.7 24669 4 PKNOX1 FOXA2 ATF1 MLX ARID4B DMAP1 YY1 ATF7 SP5 MXD4 LINC01006 RNF32 NOM1 C7orf13 MNX1 GC07P156625 GC07M156563
GH07H156607 1.5 FANTOM5 Ensembl ENCODE 10.1 +30.6 30595 5.4 PKNOX1 FOXA2 MLX ARID4B DMAP1 TCF12 GATA2 SP5 REST MIER2 LINC01006 RNF32 C7orf13 GC07P156625 GC07M156563
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around C7orf13 on UCSC Golden Path with GeneCards custom track

Promoters for C7orf13 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000220145 -246 1401 SIN3A YY1 ZNF766 ZNF143 SP3 ZC3H11A REST ZNF592 MEF2D SMARCA4

Genomic Locations for C7orf13 Gene

Genomic Locations for C7orf13 Gene
2,289 bases
Minus strand

Genomic View for C7orf13 Gene

Genes around C7orf13 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C7orf13 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C7orf13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C7orf13 Gene

Proteins for C7orf13 Gene

  • Protein details for C7orf13 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Recommended name:
    Brain my040 protein
    Protein Accession:

    Protein attributes for C7orf13 Gene

    88 amino acids
    Molecular mass:
    9541 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C7orf13 Gene

Post-translational modifications for C7orf13 Gene

No Post-translational modifications

No data available for DME Specific Peptides for C7orf13 Gene

Domains & Families for C7orf13 Gene

Protein Domains for C7orf13 Gene


Suggested Antigen Peptide Sequences for C7orf13 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C7orf13: view

No data available for Gene Families and UniProtKB/Swiss-Prot for C7orf13 Gene

Function for C7orf13 Gene

Phenotypes for C7orf13 Gene

GenomeRNAi human phenotypes for C7orf13:
genes like me logo Genes that share phenotypes with C7orf13: view

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C7orf13 Gene

Localization for C7orf13 Gene

Subcellular locations from

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for C7orf13 gene
Compartment Confidence
plasma membrane 3
nucleus 2
cytosol 2
mitochondrion 1

Gene Ontology (GO) - Cellular Components for C7orf13 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with C7orf13: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from the Human Protein Atlas (HPA) for C7orf13 Gene

Pathways & Interactions for C7orf13 Gene

SuperPathways for C7orf13 Gene

No Data Available

Interacting Proteins for C7orf13 Gene

Gene Ontology (GO) - Biological Process for C7orf13 Gene


No data available for Pathways by source and SIGNOR curated interactions for C7orf13 Gene

Drugs & Compounds for C7orf13 Gene

No Compound Related Data Available

Transcripts for C7orf13 Gene

Unigene Clusters for C7orf13 Gene

Chromosome 7 open reading frame 13:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for C7orf13 Gene

No ASD Table

Relevant External Links for C7orf13 Gene

GeneLoc Exon Structure for

Expression for C7orf13 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for C7orf13 Gene

Protein differential expression in normal tissues from HIPED for C7orf13 Gene

This gene is overexpressed in Testis (28.0), Stomach (10.6), Uterus (6.7), Ovary (6.0), and Lung (6.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for C7orf13 Gene

SOURCE GeneReport for Unigene cluster for C7orf13 Gene:

genes like me logo Genes that share expression patterns with C7orf13: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for C7orf13 Gene

Orthologs for C7orf13 Gene

No data available for Orthologs and Evolution for C7orf13 Gene

Paralogs for C7orf13 Gene

No data available for Paralogs for C7orf13 Gene

Variants for C7orf13 Gene

Sequence variations from dbSNP and Humsavar for C7orf13 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs1000311672 -- 156,639,803(+) GCGGA(A/G)GAGGA nc-transcript-variant, upstream-variant-2KB
rs1000846412 -- 156,638,850(+) ACAAC(C/T)GCCAT nc-transcript-variant, upstream-variant-2KB
rs1000958889 -- 156,638,582(+) AATCT(C/T)ACCAC nc-transcript-variant, upstream-variant-2KB
rs1001017318 -- 156,638,079(+) ATTCT(G/T)CAAAT downstream-variant-500B
rs1001046383 -- 156,638,333(+) TAAAA(A/G)ATAAA intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for C7orf13 Gene

Variant ID Type Subtype PubMed ID
nsv831198 CNV loss 17160897
nsv1023469 CNV gain 25217958
esv3615671 CNV loss 21293372

Variation tolerance for C7orf13 Gene

Gene Damage Index Score: 8.46; 85.76% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for C7orf13 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C7orf13 Gene

Disorders for C7orf13 Gene

Relevant External Links for C7orf13

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for C7orf13 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C7orf13 Gene

Publications for C7orf13 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 60
  2. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer SW … Tsui LC (Science (New York, N.Y.) 2003) 3 60
  3. A double RING-H2 domain in RNF32, a gene expressed during sperm formation. (PMID: 11890671) van Baren MJ … Heutink P (Biochemical and biophysical research communications 2002) 3 60
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for C7orf13 Gene

Sources for C7orf13 Gene

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