Free for academic non-profit institutions. Other users need a Commercial license

Aliases for C7orf13 Gene

Subcategory (RNA class) for C7orf13 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for C7orf13 Gene

  • Chromosome 7 Open Reading Frame 13 3
  • MY040 3

External Ids for C7orf13 Gene

Previous GeneCards Identifiers for C7orf13 Gene

  • GC07M154661
  • GC07M155733
  • GC07M155848
  • GC07M155930
  • GC07M156124
  • GC07M156431
  • GC07M150163
  • GC07M156266

Summaries for C7orf13 Gene

GeneCards Summary for C7orf13 Gene

C7orf13 (Chromosome 7 Open Reading Frame 13) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C7orf13 Gene

Genomics for C7orf13 Gene

Regulatory Elements for C7orf13 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for C7orf13 Gene

Chromosome:
7
Start:
156,638,366 bp from pter
End:
156,640,654 bp from pter
Size:
2,289 bases
Orientation:
Minus strand

Genomic View for C7orf13 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for C7orf13 Gene

Proteins for C7orf13 Gene

  • Protein details for C7orf13 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Q9H3I6
    Recommended name:
    Brain my040 protein
    Protein Accession:
    Q9H3I6

    Protein attributes for C7orf13 Gene

    Size:
    88 amino acids
    Molecular mass:
    9541 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C7orf13 Gene

Proteomics data for C7orf13 Gene at MOPED

Post-translational modifications for C7orf13 Gene

No Post-translational modifications

No data available for DME Specific Peptides for C7orf13 Gene

Domains & Families for C7orf13 Gene

Protein Domains for C7orf13 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for C7orf13 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C7orf13: view

No data available for Gene Families and UniProtKB/Swiss-Prot for C7orf13 Gene

Function for C7orf13 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C7orf13 Gene

Localization for C7orf13 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C7orf13 Gene COMPARTMENTS Subcellular localization image for C7orf13 gene
Compartment Confidence
cytosol 2
nucleus 2

Gene Ontology (GO) - Cellular Components for C7orf13 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with C7orf13: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for C7orf13 Gene

Pathways & Interactions for C7orf13 Gene

SuperPathways for C7orf13 Gene

No Data Available

Interacting Proteins for C7orf13 Gene

Gene Ontology (GO) - Biological Process for C7orf13 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for C7orf13 Gene

Drugs & Compounds for C7orf13 Gene

No Compound Related Data Available

Transcripts for C7orf13 Gene

Unigene Clusters for C7orf13 Gene

Chromosome 7 open reading frame 13:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C7orf13 Gene

No ASD Table

Relevant External Links for C7orf13 Gene

GeneLoc Exon Structure for
C7orf13

Expression for C7orf13 Gene

mRNA expression in normal human tissues for C7orf13 Gene

Protein differential expression in normal tissues from HIPED for C7orf13 Gene

This gene is overexpressed in Testis (28.0), Stomach (10.6), Uterus (6.7), Ovary (6.0), and Lung (6.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from for C7orf13 Gene



SOURCE GeneReport for Unigene cluster for C7orf13 Gene Hs.647014

genes like me logo Genes that share expression patterns with C7orf13: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for C7orf13 Gene

Orthologs for C7orf13 Gene

No data available for Orthologs and Evolution for C7orf13 Gene

Paralogs for C7orf13 Gene

No data available for Paralogs for C7orf13 Gene

Variants for C7orf13 Gene

Sequence variations from dbSNP and Humsavar for C7orf13 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs79378551 -- 156,638,023(+) GCATT(C/T)TGATC downstream-variant-500B
rs117645872 -- 156,638,126(+) AAAGC(A/C)ATAAG downstream-variant-500B
rs181430860 -- 156,638,240(+) AAGGG(A/G)ATGGA downstream-variant-500B
rs185908589 -- 156,637,935(+) ATAAT(A/G)TTAAA downstream-variant-500B
rs191824655 -- 156,638,151(+) CAAGC(C/T)TATAC downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for C7orf13 Gene

Variant ID Type Subtype PubMed ID
nsv831198 CNV Loss 17160897

Variation tolerance for C7orf13 Gene

Gene Damage Index Score: 8.46; 85.76% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for C7orf13 Gene

HapMap Linkage Disequilibrium report
C7orf13

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C7orf13 Gene

Disorders for C7orf13 Gene

Relevant External Links for C7orf13

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
C7orf13
genes like me logo Genes that share disorders with C7orf13: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C7orf13 Gene

Publications for C7orf13 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 67
  2. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer S.W. … Tsui L.-C. (Science 2003) 67
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 67
  4. A double RING-H2 domain in RNF32, a gene expressed during sperm formation. (PMID: 11890671) van Baren M.J. … Heutink P. (Biochem. Biophys. Res. Commun. 2002) 67

Products for C7orf13 Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate C7orf13
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for C7orf13
    • Block miRNA regulation of C7orf13 using miScript Target Protectors

    Sources for C7orf13 Gene

    Back to Top

    Content