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Aliases for C6orf99 Gene

Aliases for C6orf99 Gene

  • Chromosome 6 Open Reading Frame 99 2 3
  • Putative Uncharacterized Protein C6orf99 3
  • YR211F11.1 3

External Ids for C6orf99 Gene

Summaries for C6orf99 Gene

GeneCards Summary for C6orf99 Gene

C6orf99 (Chromosome 6 Open Reading Frame 99) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C6orf99 Gene

Genomics for C6orf99 Gene

Genomic Location for C6orf99 Gene

Start:
158,869,855 bp from pter
End:
158,910,354 bp from pter
Size:
40,500 bases
Orientation:
Plus strand

Genomic View for C6orf99 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C6orf99 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C6orf99 Gene

No data available for Regulatory Elements for C6orf99 Gene

Proteins for C6orf99 Gene

  • Protein details for C6orf99 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q4VX62-CF099_HUMAN
    Recommended name:
    Putative uncharacterized protein C6orf99
    Protein Accession:
    Q4VX62
    Secondary Accessions:
    • Q4VX61

    Protein attributes for C6orf99 Gene

    Size:
    202 amino acids
    Molecular mass:
    22766 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for C6orf99 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for C6orf99 Gene

Proteomics data for C6orf99 Gene at MOPED

Post-translational modifications for C6orf99 Gene

No Post-translational modifications

Other Protein References for C6orf99 Gene

No data available for DME Specific Peptides for C6orf99 Gene

Domains for C6orf99 Gene

Protein Domains for C6orf99 Gene

ProtoNet:
genes like me logo Genes that share domains with C6orf99: view

No data available for Gene Families and UniProtKB/Swiss-Prot for C6orf99 Gene

Function for C6orf99 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C6orf99 Gene

Localization for C6orf99 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C6orf99 Gene COMPARTMENTS Subcellular localization image for C6orf99 gene
Compartment Confidence
cytosol 2
extracellular 2
nucleus 2
peroxisome 1

No data available for Gene Ontology (GO) - Cellular Components for C6orf99 Gene

Pathways for C6orf99 Gene

SuperPathways for C6orf99 Gene

No Data Available

Interacting Proteins for C6orf99 Gene

Gene Ontology (GO) - Biological Process for C6orf99 Gene

None

No data available for Pathways by source for C6orf99 Gene

Transcripts for C6orf99 Gene

mRNA/cDNA for C6orf99 Gene

(6) REFSEQ mRNAs :
(0) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for C6orf99 Gene

Chromosome 6 open reading frame 99:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C6orf99 Gene

No ASD Table

Relevant External Links for C6orf99 Gene

GeneLoc Exon Structure for
C6orf99
ECgene alternative splicing isoforms for
C6orf99

Expression for C6orf99 Gene

mRNA expression in normal human tissues for C6orf99 Gene

mRNA differential expression in normal tissues according to GTEx for C6orf99 Gene

This gene is overexpressed in Testis (45.8).

SOURCE GeneReport for Unigene cluster for C6orf99 Gene Hs.32804

genes like me logo Genes that share expressions with C6orf99: view

Orthologs for C6orf99 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for C6orf99 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C6H6orf99 36
  • 96.94 (n)
  • 92.86 (a)
C6orf99 37
  • 57 (a)
OneToOne
Species with no ortholog for C6orf99:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C6orf99 Gene

ENSEMBL:
Gene Tree for C6orf99 (if available)
TreeFam:
Gene Tree for C6orf99 (if available)

Paralogs for C6orf99 Gene

Pseudogenes.org Pseudogenes for C6orf99 Gene

genes like me logo Genes that share paralogs with C6orf99: view

No data available for Paralogs for C6orf99 Gene

Variants for C6orf99 Gene

Sequence variations from dbSNP and Humsavar for C6orf99 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type MAF
rs4342446 -- 158,900,527(+) ttgat(C/T)aattc intron-variant
rs4358651 -- 158,886,114(+) cgccg(G/T)caata intron-variant
rs4466269 -- 158,885,657(+) TCTGG(C/T)TTTTG intron-variant
rs4555946 -- 158,885,537(+) GAAGG(G/T)GTTGT intron-variant
rs4566906 -- 158,886,203(+) AAACA(A/G)GGGAC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for C6orf99 Gene

Variant ID Type Subtype PubMed ID
esv2733019 CNV Deletion 23290073
esv2677655 CNV Deletion 23128226
dgv1073n67 CNV Loss 20364138
dgv1074n67 CNV Loss 20364138
nsv442017 CNV CNV 18776908
nsv527528 CNV Loss 19592680

Relevant External Links for C6orf99 Gene

HapMap Linkage Disequilibrium report
C6orf99

Disorders for C6orf99 Gene

Relevant External Links for C6orf99

Genetic Association Database (GAD)
C6orf99
genes like me logo Genes that share disorders with C6orf99: view

No data available for UniProtKB/Swiss-Prot for C6orf99 Gene

Publications for C6orf99 Gene

  1. The DNA sequence and analysis of human chromosome 6. (PMID: 14574404) Mungall A.J. … Beck S. (Nature 2003) 3 4

Products for C6orf99 Gene

Sources for C6orf99 Gene

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