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Aliases for C6orf47-AS1 Gene

Subcategory (RNA class) for C6orf47-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for C6orf47-AS1 Gene

  • C6orf47 Antisense RNA 1 2 3 5
  • C6orf47 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for C6orf47-AS1 Gene

Previous GeneCards Identifiers for C6orf47-AS1 Gene

  • GC00U933619
  • GC06P031627
  • GC06P031639
  • GC06P031723
  • GC06P031694
  • GC06P031755
  • GC06P031790
  • GC06P031818
  • GC06P031868

Summaries for C6orf47-AS1 Gene

GeneCards Summary for C6orf47-AS1 Gene

C6orf47-AS1 (C6orf47 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C6orf47-AS1 Gene

Genomics for C6orf47-AS1 Gene

Regulatory Elements for C6orf47-AS1 Gene

Enhancers for C6orf47-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G031614 1.1 Ensembl ENCODE 11.4 -42.5 -42495 3.7 HDAC1 ELF3 HDGF TBP ZNF121 RELB ETV6 IKZF2 CREM TBX21 BAG6 LY6G5B HLA-DRB1 SKIV2L LY6G5C LST1 LTB C4A DDX39B DDX39B-AS1
GH06G031658 1.3 ENCODE dbSUPER 0.7 +1.8 1809 3.9 HDGF HNRNPUL1 PKNOX1 CREB3L1 ARNT AGO1 ARID4B SIN3A DMAP1 SLC30A9 LY6G5C C4A BAG6 LY6G5B MICB STK19B VWA7 CYP21A1P AIF1 LOC101929072
GH06G031654 1 ENCODE 0.7 -3.0 -2963 1.8 HNRNPUL1 FOXA2 ATF1 MLX ZFP64 ARID4B DMAP1 ZNF48 YY1 SLC30A9 BAG6 CLIC1 MICB LY6G5B LOC101929072 APOM C6orf47-AS1
GH06G031657 0.7 ENCODE 0.7 -0.7 -699 0.6 PKNOX1 KLF1 ATF1 ZBTB21 RBBP5 ZNF600 PRDM10 ZBTB10 NCOA1 ZNF398 LY6G5B C6orf47-AS1 APOM
GH06G031650 1.2 ENCODE 0.4 -5.9 -5864 3.3 CREB3L1 MLX AGO1 ZFP64 DMAP1 FEZF1 YBX1 YY1 SLC30A9 ZNF143 LY6G5B BAG6 LY6G5C DDX39B ATF6B DHX16 NFKBIL1 LSM2 GTF2H4 SKIV2L
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around C6orf47-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for C6orf47-AS1 Gene

Chromosome:
6
Start:
31,658,329 bp from pter
End:
31,660,721 bp from pter
Size:
2,393 bases
Orientation:
Plus strand

Genomic View for C6orf47-AS1 Gene

Genes around C6orf47-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C6orf47-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C6orf47-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for C6orf47-AS1 Gene

Proteins for C6orf47-AS1 Gene

Post-translational modifications for C6orf47-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for C6orf47-AS1 Gene

Domains & Families for C6orf47-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C6orf47-AS1 Gene

Function for C6orf47-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C6orf47-AS1 Gene

Localization for C6orf47-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for C6orf47-AS1 Gene

Pathways & Interactions for C6orf47-AS1 Gene

SuperPathways for C6orf47-AS1 Gene

No Data Available

Interacting Proteins for C6orf47-AS1 Gene

Gene Ontology (GO) - Biological Process for C6orf47-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for C6orf47-AS1 Gene

Drugs & Compounds for C6orf47-AS1 Gene

No Compound Related Data Available

Transcripts for C6orf47-AS1 Gene

mRNA/cDNA for C6orf47-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for C6orf47-AS1 Gene

No ASD Table

Relevant External Links for C6orf47-AS1 Gene

GeneLoc Exon Structure for
C6orf47-AS1
ECgene alternative splicing isoforms for
C6orf47-AS1

Expression for C6orf47-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for C6orf47-AS1 Gene

genes like me logo Genes that share expression patterns with C6orf47-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for C6orf47-AS1 Gene

Orthologs for C6orf47-AS1 Gene

Evolution for C6orf47-AS1 Gene

ENSEMBL:
Gene Tree for C6orf47-AS1 (if available)
TreeFam:
Gene Tree for C6orf47-AS1 (if available)

No data available for Orthologs for C6orf47-AS1 Gene

Paralogs for C6orf47-AS1 Gene

No data available for Paralogs for C6orf47-AS1 Gene

Variants for C6orf47-AS1 Gene

Relevant External Links for C6orf47-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
C6orf47-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for C6orf47-AS1 Gene

Disorders for C6orf47-AS1 Gene

No disorders were found for C6orf47-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for C6orf47-AS1 Gene

Publications for C6orf47-AS1 Gene

No publications were found for C6orf47-AS1 Gene.

Products for C6orf47-AS1 Gene

Sources for C6orf47-AS1 Gene

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