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Aliases for C6orf47-AS1 Gene

Subcategory (RNA class) for C6orf47-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for C6orf47-AS1 Gene

  • C6orf47 Antisense RNA 1 2 3 5
  • C6orf47 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for C6orf47-AS1 Gene

Previous GeneCards Identifiers for C6orf47-AS1 Gene

  • GC00U933619
  • GC06P031627
  • GC06P031639
  • GC06P031723
  • GC06P031694
  • GC06P031755
  • GC06P031790
  • GC06P031818

Summaries for C6orf47-AS1 Gene

GeneCards Summary for C6orf47-AS1 Gene

C6orf47-AS1 (C6orf47 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C6orf47-AS1 Gene

Genomics for C6orf47-AS1 Gene

Regulatory Elements for C6orf47-AS1 Gene

Enhancers for C6orf47-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F031614 0.5 ENCODE 11.4 -42.5 -42469 3.6 ELF3 HDGF TBP HDAC1 ZNF121 ETV6 CREM TBX21 KAT8 SP1 BAG6 LY6G5B HLA-DRB1 SKIV2L LY6G5C LST1 LTB C4A DDX39B DDX39B-AS1
GH06F031657 0.8 ENCODE 0.8 -0.7 -699 0.6 ZBTB10 HDGF ATF1 PKNOX1 NCOA1 REST ATF2 JUND KLF9 PRDM10 LY6G5B C6orf47-AS1 APOM
GH06F031654 0.2 ENCODE 0.8 -3.0 -2963 1.8 ATF1 MLX ZFP64 ARID4B DMAP1 ZNF48 YY1 SLC30A9 SP5 NFYC BAG6 CLIC1 MICB LY6G5B LOC101929072 APOM C6orf47-AS1
GH06F031658 1.1 ENCODE 0.8 +1.8 1809 3.9 HDGF PKNOX1 ARID4B SIN3A DMAP1 SLC30A9 KLF13 DEK PAF1 ZNF263 LY6G5C LY6G5B C4A ATF6B DDX39B BAG6 NFKBIL1 LSM2 PPT2 GTF2H4
GH06F031650 0.5 ENCODE 0.4 -5.9 -5864 3.3 MLX CREB3L1 ZFP64 FEZF1 DMAP1 YBX1 YY1 SLC30A9 ZNF143 ZNF263 DHX16 LY6G5B BAG6 DDX39B LY6G5C ATF6B LSM2 MICA PPT2 NFKBIL1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around C6orf47-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for C6orf47-AS1 Gene

Chromosome:
6
Start:
31,658,329 bp from pter
End:
31,660,721 bp from pter
Size:
2,393 bases
Orientation:
Plus strand

Genomic View for C6orf47-AS1 Gene

Genes around C6orf47-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C6orf47-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C6orf47-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for C6orf47-AS1 Gene

Proteins for C6orf47-AS1 Gene

Post-translational modifications for C6orf47-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for C6orf47-AS1 Gene

Domains & Families for C6orf47-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C6orf47-AS1 Gene

Function for C6orf47-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C6orf47-AS1 Gene

Localization for C6orf47-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for C6orf47-AS1 Gene

Pathways & Interactions for C6orf47-AS1 Gene

SuperPathways for C6orf47-AS1 Gene

No Data Available

Interacting Proteins for C6orf47-AS1 Gene

Gene Ontology (GO) - Biological Process for C6orf47-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for C6orf47-AS1 Gene

Transcripts for C6orf47-AS1 Gene

mRNA/cDNA for C6orf47-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for C6orf47-AS1 Gene

No ASD Table

Relevant External Links for C6orf47-AS1 Gene

GeneLoc Exon Structure for
C6orf47-AS1
ECgene alternative splicing isoforms for
C6orf47-AS1

Expression for C6orf47-AS1 Gene

mRNA expression in normal human tissues for C6orf47-AS1 Gene

genes like me logo Genes that share expression patterns with C6orf47-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for C6orf47-AS1 Gene

Orthologs for C6orf47-AS1 Gene

Evolution for C6orf47-AS1 Gene

ENSEMBL:
Gene Tree for C6orf47-AS1 (if available)
TreeFam:
Gene Tree for C6orf47-AS1 (if available)

No data available for Orthologs for C6orf47-AS1 Gene

Paralogs for C6orf47-AS1 Gene

No data available for Paralogs for C6orf47-AS1 Gene

Variants for C6orf47-AS1 Gene

Relevant External Links for C6orf47-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
C6orf47-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for C6orf47-AS1 Gene

Disorders for C6orf47-AS1 Gene

No disorders were found for C6orf47-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for C6orf47-AS1 Gene

Publications for C6orf47-AS1 Gene

No publications were found for C6orf47-AS1 Gene.

Products for C6orf47-AS1 Gene

Sources for C6orf47-AS1 Gene

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