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Aliases for C6orf203 Gene

Aliases for C6orf203 Gene

  • Chromosome 6 Open Reading Frame 203 2 3
  • Uncharacterized Protein C6orf203 3
  • HSPC230 3
  • PRED31 3

External Ids for C6orf203 Gene

Previous GeneCards Identifiers for C6orf203 Gene

  • GC06P107349
  • GC06P107394
  • GC06P107456
  • GC06P104921

Summaries for C6orf203 Gene

GeneCards Summary for C6orf203 Gene

C6orf203 (Chromosome 6 Open Reading Frame 203) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C6orf203 Gene

Genomics for C6orf203 Gene

Regulatory Elements for C6orf203 Gene

Transcription factor binding sites by QIAGEN in the C6orf203 gene promoter:

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for C6orf203 Gene

Start:
107,028,172 bp from pter
End:
107,051,586 bp from pter
Size:
23,415 bases
Orientation:
Plus strand

Genomic View for C6orf203 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C6orf203 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C6orf203 Gene

Proteins for C6orf203 Gene

  • Protein details for C6orf203 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9P0P8-CF203_HUMAN
    Recommended name:
    Uncharacterized protein C6orf203
    Protein Accession:
    Q9P0P8
    Secondary Accessions:
    • B3KRG9

    Protein attributes for C6orf203 Gene

    Size:
    240 amino acids
    Molecular mass:
    27941 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C6orf203 Gene

Proteomics data for C6orf203 Gene at MOPED

Post-translational modifications for C6orf203 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C6orf203 Gene

No data available for DME Specific Peptides for C6orf203 Gene

Domains for C6orf203 Gene

Protein Domains for C6orf203 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C6orf203: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C6orf203 Gene

Function for C6orf203 Gene

Animal Model Products

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for C6orf203

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C6orf203 Gene

Localization for C6orf203 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C6orf203 Gene COMPARTMENTS Subcellular localization image for C6orf203 gene
Compartment Confidence
extracellular 2
mitochondrion 2
cytosol 1
endoplasmic reticulum 1
golgi apparatus 1
nucleus 1
peroxisome 1

Gene Ontology (GO) - Cellular Components for C6orf203 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005739 mitochondrion IDA 20833797
genes like me logo Genes that share ontologies with C6orf203: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for C6orf203 Gene

Pathways for C6orf203 Gene

SuperPathways for C6orf203 Gene

No Data Available

Interacting Proteins for C6orf203 Gene

Gene Ontology (GO) - Biological Process for C6orf203 Gene

None

No data available for Pathways by source for C6orf203 Gene

Transcripts for C6orf203 Gene

Unigene Clusters for C6orf203 Gene

Chromosome 6 open reading frame 203:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for C6orf203

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for C6orf203 Gene

No ASD Table

Relevant External Links for C6orf203 Gene

GeneLoc Exon Structure for
C6orf203
ECgene alternative splicing isoforms for
C6orf203

Expression for C6orf203 Gene

mRNA expression in normal human tissues for C6orf203 Gene

Integrated Proteomics: protein expression from ProteomicsDB, MOPED, and MaxQB for C6orf203 Gene

SOURCE GeneReport for Unigene cluster for C6orf203 Gene Hs.486084

genes like me logo Genes that share expressions with C6orf203: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for C6orf203 Gene

Orthologs for C6orf203 Gene

This gene was present in the common ancestor of animals.

Orthologs for C6orf203 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C6H6orf203 35
  • 99.45 (n)
  • 99.59 (a)
C6orf203 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia C9H6ORF203 36
  • 67 (a)
OneToOne
dog
(Canis familiaris)
Mammalia C12H6orf203 35
  • 86.19 (n)
  • 80.75 (a)
C6orf203 36
  • 83 (a)
OneToOne
mouse
(Mus musculus)
Mammalia 1700021F05Rik 35
  • 80.61 (n)
  • 79.5 (a)
1700021F05Rik 16
1700021F05Rik 36
  • 79 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia C6orf203 36
  • 69 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia C6orf203 36
  • 53 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia LOC683897 35
  • 79.78 (n)
  • 78.24 (a)
chicken
(Gallus gallus)
Aves C3H6ORF203 35
  • 66.22 (n)
  • 58.11 (a)
C3H6ORF203 36
  • 55 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia C6orf203 36
  • 51 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia Xl.19228 35
tropical clawed frog
(Silurana tropicalis)
Amphibia c6orf203 35
  • 56.48 (n)
  • 50.93 (a)
Str.16694 35
zebrafish
(Danio rerio)
Actinopterygii C13H6orf203 36
  • 40 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta CG4884 36
  • 30 (a)
OneToOne
Species with no ortholog for C6orf203:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for C6orf203 Gene

ENSEMBL:
Gene Tree for C6orf203 (if available)
TreeFam:
Gene Tree for C6orf203 (if available)

Paralogs for C6orf203 Gene

Pseudogenes.org Pseudogenes for C6orf203 Gene

genes like me logo Genes that share paralogs with C6orf203: view

No data available for Paralogs for C6orf203 Gene

Variants for C6orf203 Gene

Sequence variations from dbSNP and Humsavar for C6orf203 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type MAF
rs167472 -- 107,036,829(+) tgggc(A/G)acaga intron-variant
rs182573 -- 107,040,916(+) GTATA(A/C)TAAGA intron-variant
rs311199 -- 107,036,569(+) ctggg(C/T)gcggt intron-variant
rs311200 -- 107,036,586(+) cgcct(C/G)taatc intron-variant
rs311201 -- 107,037,121(+) AATCA(A/G)TGAAA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for C6orf203 Gene

Variant ID Type Subtype PubMed ID
esv2732546 CNV Deletion 23290073
nsv508425 CNV Loss 20534489
nsv509145 CNV Insertion 20534489
nsv510909 CNV Complex 20534489
dgv87n68 CNV Loss 17160897
nsv5431 CNV Insertion 18451855

Relevant External Links for C6orf203 Gene

HapMap Linkage Disequilibrium report
C6orf203

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C6orf203 Gene

Disorders for C6orf203 Gene

Relevant External Links for C6orf203

Human Genome Epidemiology (HuGE) Navigator
C6orf203
genes like me logo Genes that share disorders with C6orf203: view

No data available for UniProtKB/Swiss-Prot for C6orf203 Gene

Publications for C6orf203 Gene

  1. Cloning and functional analysis of cDNAs with open reading frames for 300 previously undefined genes expressed in CD34+ hematopoietic stem/progenitor cells. (PMID: 11042152) Zhang Q.-H. … Chen Z. (Genome Res. 2000) 2 3 4
  2. From PREDs and open reading frames to cDNA isolation: revisiting the human chromosome 21 transcription map. (PMID: 11707072) Reymond A. … Antonarakis S.E. (Genomics 2001) 2 3
  3. The DNA sequence and analysis of human chromosome 6. (PMID: 14574404) Mungall A.J. … Beck S. (Nature 2003) 3 4
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4

Products for C6orf203 Gene

Sources for C6orf203 Gene

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