Free for academic non-profit institutions. Other users need a Commercial license

Aliases for C6orf163 Gene

Aliases for C6orf163 Gene

  • Chromosome 6 Open Reading Frame 163 2 3

External Ids for C6orf163 Gene

Summaries for C6orf163 Gene

GeneCards Summary for C6orf163 Gene

C6orf163 (Chromosome 6 Open Reading Frame 163) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C6orf163 Gene

Genomics for C6orf163 Gene

Genomic Location for C6orf163 Gene

Start:
87,344,656 bp from pter
End:
87,365,463 bp from pter
Size:
20,808 bases
Orientation:
Plus strand

Genomic View for C6orf163 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C6orf163 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C6orf163 Gene

Regulatory Elements for C6orf163 Gene

Proteins for C6orf163 Gene

  • Protein details for C6orf163 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q5TEZ5-CF163_HUMAN
    Recommended name:
    Uncharacterized protein C6orf163
    Protein Accession:
    Q5TEZ5
    Secondary Accessions:

    Protein attributes for C6orf163 Gene

    Size:
    329 amino acids
    Molecular mass:
    38553 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=CAB71116.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};

neXtProt entry for C6orf163 Gene

Proteomics data for C6orf163 Gene at MOPED

Post-translational modifications for C6orf163 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C6orf163 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C6orf163 Gene

Domains for C6orf163 Gene

Protein Domains for C6orf163 Gene

ProtoNet:
genes like me logo Genes that share domains with C6orf163: view

No data available for Gene Families and UniProtKB/Swiss-Prot for C6orf163 Gene

Function for C6orf163 Gene

Gene Ontology (GO) - Molecular Function for C6orf163 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003674 molecular_function ND --
genes like me logo Genes that share ontologies with C6orf163: view

Phenotypes for C6orf163 Gene

GenomeRNAi human phenotypes for C6orf163:
genes like me logo Genes that share phenotypes with C6orf163: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C6orf163 Gene

Localization for C6orf163 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C6orf163 Gene COMPARTMENTS Subcellular localization image for C6orf163 gene
Compartment Confidence
cytosol 3
nucleus 2
mitochondrion 1

Gene Ontology (GO) - Cellular Components for C6orf163 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005575 cellular_component ND --
genes like me logo Genes that share ontologies with C6orf163: view

Pathways for C6orf163 Gene

SuperPathways for C6orf163 Gene

No Data Available

Interacting Proteins for C6orf163 Gene

Gene Ontology (GO) - Biological Process for C6orf163 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0008150 biological_process ND --
genes like me logo Genes that share ontologies with C6orf163: view

No data available for Pathways by source for C6orf163 Gene

Transcripts for C6orf163 Gene

mRNA/cDNA for C6orf163 Gene

(7) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(13) Selected AceView cDNA sequences:
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for C6orf163 Gene

Chromosome 6 open reading frame 163:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C6orf163 Gene

No ASD Table

Relevant External Links for C6orf163 Gene

GeneLoc Exon Structure for
C6orf163
ECgene alternative splicing isoforms for
C6orf163

Expression for C6orf163 Gene

mRNA expression in normal human tissues for C6orf163 Gene

mRNA differential expression in normal tissues according to GTEx for C6orf163 Gene

This gene is overexpressed in Testis (8.4).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for C6orf163 Gene

SOURCE GeneReport for Unigene cluster for C6orf163 Gene Hs.646309

genes like me logo Genes that share expressions with C6orf163: view

Orthologs for C6orf163 Gene

This gene was present in the common ancestor of chordates.

Orthologs for C6orf163 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C6H6orf163 36
  • 99.39 (n)
  • 98.78 (a)
C6orf163 37
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia C9H6orf163 36
  • 84.09 (n)
  • 75.38 (a)
C9H6orf163 37
  • 75 (a)
OneToOne
dog
(Canis familiaris)
Mammalia C12H6orf163 36
  • 87.03 (n)
  • 81.76 (a)
C6ORF163 37
  • 82 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm136 36
  • 78.15 (n)
  • 73.78 (a)
Gm136 16
Gm136 37
  • 74 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia C6orf163 37
  • 47 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia -- 37
  • 49 (a)
OneToMany
-- 37
  • 50 (a)
OneToMany
rat
(Rattus norvegicus)
Mammalia RGD1563056 36
  • 79.31 (n)
  • 74.62 (a)
chicken
(Gallus gallus)
Aves C6ORF163 36
  • 57.26 (n)
  • 42.63 (a)
C6orf163 37
  • 39 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia C6orf163 37
  • 40 (a)
OneToOne
Species with no ortholog for C6orf163:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C6orf163 Gene

ENSEMBL:
Gene Tree for C6orf163 (if available)
TreeFam:
Gene Tree for C6orf163 (if available)

Paralogs for C6orf163 Gene

No data available for Paralogs for C6orf163 Gene

Variants for C6orf163 Gene

Sequence variations from dbSNP and Humsavar for C6orf163 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type MAF
rs107689 -- 87,359,615(+) CAAAG(G/T)ATCAA intron-variant
rs107690 -- 87,359,634(+) ATGGA(C/T)TTTCC intron-variant
rs183599 -- 87,351,306(+) AGGTC(C/T)GGACC intron-variant
rs190262 -- 87,360,889(+) aaTGG(G/T)CATTG intron-variant
rs242264 -- 87,351,020(+) ACTGC(C/T)AAGAG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for C6orf163 Gene

Variant ID Type Subtype PubMed ID
nsv830722 CNV Gain 17160897

Relevant External Links for C6orf163 Gene

HapMap Linkage Disequilibrium report
C6orf163

Disorders for C6orf163 Gene

No disorders were found for C6orf163 Gene.

No data available for UniProtKB/Swiss-Prot for C6orf163 Gene

Publications for C6orf163 Gene

  1. The DNA sequence and analysis of human chromosome 6. (PMID: 14574404) Mungall A.J. … Beck S. (Nature 2003) 3 4
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for C6orf163 Gene

Sources for C6orf163 Gene

Back to Top

Content