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Aliases for C5orf64-AS1 Gene

Subcategory (RNA class) for C5orf64-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for C5orf64-AS1 Gene

  • C5orf64 Antisense RNA 1 2 3 5
  • CTD-2170G1.2 3

External Ids for C5orf64-AS1 Gene

Summaries for C5orf64-AS1 Gene

GeneCards Summary for C5orf64-AS1 Gene

C5orf64-AS1 (C5orf64 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C5orf64-AS1 Gene

Genomics for C5orf64-AS1 Gene

Regulatory Elements for C5orf64-AS1 Gene

Enhancers for C5orf64-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05G061686 0.4 dbSUPER 5.9 +48.7 48711 1.0 FEZF1 PRDM10 RNU6-913P C5orf64-AS1 LOC101928651 GC05M061665
GH05G061736 0.9 FANTOM5 ENCODE 0.7 -1.4 -1422 1.1 CTCF MXI1 RFX1 FOXP2 EP300 LOC101928651 GC05P061738 C5orf64-AS1
GH05G061731 0.5 ENCODE 0.7 +3.8 3804 1.3 TRIM24 RAD21 PRDM1 NR2F2 LOC101928651 C5orf64-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around C5orf64-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for C5orf64-AS1 Gene

Chromosome:
5
Start:
61,732,774 bp from pter
End:
61,735,698 bp from pter
Size:
2,925 bases
Orientation:
Minus strand

Genomic View for C5orf64-AS1 Gene

Genes around C5orf64-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C5orf64-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C5orf64-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C5orf64-AS1 Gene

Proteins for C5orf64-AS1 Gene

Post-translational modifications for C5orf64-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for C5orf64-AS1 Gene

Domains & Families for C5orf64-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C5orf64-AS1 Gene

Function for C5orf64-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C5orf64-AS1 Gene

Localization for C5orf64-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for C5orf64-AS1 Gene

Pathways & Interactions for C5orf64-AS1 Gene

SuperPathways for C5orf64-AS1 Gene

No Data Available

Interacting Proteins for C5orf64-AS1 Gene

Gene Ontology (GO) - Biological Process for C5orf64-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for C5orf64-AS1 Gene

Drugs & Compounds for C5orf64-AS1 Gene

No Compound Related Data Available

Transcripts for C5orf64-AS1 Gene

mRNA/cDNA for C5orf64-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for C5orf64-AS1 Gene

No ASD Table

Relevant External Links for C5orf64-AS1 Gene

GeneLoc Exon Structure for
C5orf64-AS1
ECgene alternative splicing isoforms for
C5orf64-AS1

Expression for C5orf64-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for C5orf64-AS1 Gene

Orthologs for C5orf64-AS1 Gene

Evolution for C5orf64-AS1 Gene

ENSEMBL:
Gene Tree for C5orf64-AS1 (if available)
TreeFam:
Gene Tree for C5orf64-AS1 (if available)

No data available for Orthologs for C5orf64-AS1 Gene

Paralogs for C5orf64-AS1 Gene

No data available for Paralogs for C5orf64-AS1 Gene

Variants for C5orf64-AS1 Gene

Sequence variations from dbSNP and Humsavar for C5orf64-AS1 Gene

SNP ID Clin Chr 05 pos Sequence Context AA Info Type
rs1000813965 -- 61,734,615(+) GGTGT(C/T)CTTTG intron-variant
rs1000928155 -- 61,734,836(+) TCAAA(C/G)TCAGC intron-variant
rs1001498391 -- 61,732,963(+) TGCTC(C/T)GAGAA intron-variant, nc-transcript-variant
rs1002184234 -- 61,734,769(+) CTCCC(A/G)CGGGC intron-variant
rs1002259606 -- 61,734,388(+) AAGGA(A/G)GCATC intron-variant

Relevant External Links for C5orf64-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
C5orf64-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for C5orf64-AS1 Gene

Disorders for C5orf64-AS1 Gene

No disorders were found for C5orf64-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for C5orf64-AS1 Gene

Publications for C5orf64-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for C5orf64-AS1 Gene

Sources for C5orf64-AS1 Gene

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