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Aliases for C4orf36 Gene

Aliases for C4orf36 Gene

  • Chromosome 4 Open Reading Frame 36 2 3

External Ids for C4orf36 Gene

Summaries for C4orf36 Gene

GeneCards Summary for C4orf36 Gene

C4orf36 (Chromosome 4 Open Reading Frame 36) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C4orf36 Gene

Genomics for C4orf36 Gene

Genomic Location for C4orf36 Gene

Start:
86,876,205 bp from pter
End:
86,936,202 bp from pter
Size:
59,998 bases
Orientation:
Minus strand

Genomic View for C4orf36 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C4orf36 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C4orf36 Gene

Regulatory Elements for C4orf36 Gene

Proteins for C4orf36 Gene

  • Protein details for C4orf36 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96KX1-CD036_HUMAN
    Recommended name:
    Uncharacterized protein C4orf36
    Protein Accession:
    Q96KX1
    Secondary Accessions:

    Protein attributes for C4orf36 Gene

    Size:
    117 amino acids
    Molecular mass:
    13276 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C4orf36 Gene

Proteomics data for C4orf36 Gene at MOPED

Post-translational modifications for C4orf36 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C4orf36 Gene

No data available for DME Specific Peptides for C4orf36 Gene

Domains for C4orf36 Gene

Protein Domains for C4orf36 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C4orf36: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C4orf36 Gene

Function for C4orf36 Gene

Phenotypes for C4orf36 Gene

GenomeRNAi human phenotypes for C4orf36:
genes like me logo Genes that share phenotypes with C4orf36: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C4orf36 Gene

Localization for C4orf36 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C4orf36 Gene COMPARTMENTS Subcellular localization image for C4orf36 gene
Compartment Confidence
extracellular 2
mitochondrion 2
cytosol 1
nucleus 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for C4orf36 Gene

Pathways for C4orf36 Gene

SuperPathways for C4orf36 Gene

No Data Available

Interacting Proteins for C4orf36 Gene

Gene Ontology (GO) - Biological Process for C4orf36 Gene

None

No data available for Pathways by source for C4orf36 Gene

Transcripts for C4orf36 Gene

Unigene Clusters for C4orf36 Gene

Chromosome 4 open reading frame 36:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C4orf36 Gene

ExUns: 1a · 1b · 1c ^ 2a · 2b ^ 3a · 3b ^ 4a · 4b · 4c ^ 5a · 5b ^ 6
SP1: - - -
SP2: -
SP3: - - -
SP4: - -

Relevant External Links for C4orf36 Gene

GeneLoc Exon Structure for
C4orf36
ECgene alternative splicing isoforms for
C4orf36

Expression for C4orf36 Gene

mRNA expression in normal human tissues for C4orf36 Gene

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for C4orf36 Gene

SOURCE GeneReport for Unigene cluster for C4orf36 Gene Hs.339646

genes like me logo Genes that share expressions with C4orf36: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for C4orf36 Gene

Orthologs for C4orf36 Gene

This gene was present in the common ancestor of mammals.

Orthologs for C4orf36 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C4H4orf36 35
  • 98.86 (n)
  • 100 (a)
C4orf36 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia C6H4orf36 35
  • 81.77 (n)
  • 73.5 (a)
dog
(Canis familiaris)
Mammalia C4orf36 36
  • 74 (a)
OneToOne
mouse
(Mus musculus)
Mammalia 1700016H13Rik 35
  • 71.79 (n)
  • 64.1 (a)
1700016H13Rik 16
1700016H13Rik 36
  • 63 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia C4orf36 36
  • 52 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia C4orf36 36
  • 34 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia LOC498330 35
  • 70.94 (n)
  • 59.83 (a)
Species with no ortholog for C4orf36:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C4orf36 Gene

ENSEMBL:
Gene Tree for C4orf36 (if available)
TreeFam:
Gene Tree for C4orf36 (if available)

Paralogs for C4orf36 Gene

No data available for Paralogs for C4orf36 Gene

Variants for C4orf36 Gene

Sequence variations from dbSNP and Humsavar for C4orf36 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type MAF
rs895739 -- 86,908,218(+) ACACA(C/T)GTTGC intron-variant
rs1010902 -- 86,898,002(+) TACAA(C/T)GTCAC intron-variant
rs1010903 -- 86,898,040(+) ATTTA(C/T)CTGCT intron-variant
rs1075989 -- 86,908,098(+) TACAC(A/G)TAGAT intron-variant
rs1374934 -- 86,877,043(-) AGGGT(C/T)ACTGT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for C4orf36 Gene

Variant ID Type Subtype PubMed ID
nsv508297 CNV Loss 20534489

Relevant External Links for C4orf36 Gene

HapMap Linkage Disequilibrium report
C4orf36

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C4orf36 Gene

Disorders for C4orf36 Gene

Relevant External Links for C4orf36

Genetic Association Database (GAD)
C4orf36
Human Genome Epidemiology (HuGE) Navigator
C4orf36
genes like me logo Genes that share disorders with C4orf36: view

No data available for UniProtKB/Swiss-Prot for C4orf36 Gene

Publications for C4orf36 Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  2. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3 48
  3. A high-density genome-wide association screen of sporadic ALS in US veterans. (PMID: 22470424) Kwee L.C. … Hauser M.A. (PLoS ONE 2012) 3 48
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for C4orf36 Gene

Sources for C4orf36 Gene

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