Free for academic non-profit institutions. Other users need a Commercial license

Aliases for C3orf79 Gene

Aliases for C3orf79 Gene

  • Chromosome 3 Open Reading Frame 79 2 3 5

External Ids for C3orf79 Gene

Previous GeneCards Identifiers for C3orf79 Gene

  • GC03P154685
  • GC03P153202
  • GC03P150594

Summaries for C3orf79 Gene

GeneCards Summary for C3orf79 Gene

C3orf79 (Chromosome 3 Open Reading Frame 79) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C3orf79 Gene

Genomics for C3orf79 Gene

Regulatory Elements for C3orf79 Gene

Enhancers for C3orf79 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F153506 0.6 Ensembl 0.3 +22.4 22406 0.2 POLR2H POLR2A FOXK2 NFRKB SUPT5H C3orf79 ENSG00000200162
GH03F153599 1 Ensembl ENCODE 0.1 +116.1 116059 2.5 SOX13 ELF3 JUN ZNF644 RARA FOXK2 ZNF169 HNF4G FOS GATAD2A LINC02006 ENSG00000200162 C3orf79
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around C3orf79 on UCSC Golden Path with GeneCards custom track

Genomic Location for C3orf79 Gene

153,484,495 bp from pter
153,502,697 bp from pter
18,203 bases
Plus strand

Genomic View for C3orf79 Gene

Genes around C3orf79 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C3orf79 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C3orf79 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C3orf79 Gene

Proteins for C3orf79 Gene

  • Protein details for C3orf79 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative uncharacterized protein C3orf79
    Protein Accession:

    Protein attributes for C3orf79 Gene

    100 amino acids
    Molecular mass:
    11337 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C3orf79 Gene

Post-translational modifications for C3orf79 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C3orf79 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for C3orf79 Gene

Domains & Families for C3orf79 Gene

Protein Domains for C3orf79 Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C3orf79: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C3orf79 Gene

Function for C3orf79 Gene

Phenotypes for C3orf79 Gene

GenomeRNAi human phenotypes for C3orf79:
genes like me logo Genes that share phenotypes with C3orf79: view

Animal Model Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C3orf79 Gene

Localization for C3orf79 Gene

Subcellular locations from

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for C3orf79 gene
Compartment Confidence
extracellular 2
cytosol 2
nucleus 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for C3orf79 Gene

Pathways & Interactions for C3orf79 Gene

SuperPathways for C3orf79 Gene

No Data Available

Interacting Proteins for C3orf79 Gene

Gene Ontology (GO) - Biological Process for C3orf79 Gene


No data available for Pathways by source and SIGNOR curated interactions for C3orf79 Gene

Transcripts for C3orf79 Gene

mRNA/cDNA for C3orf79 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(36) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for C3orf79 Gene

Chromosome 3 open reading frame 79:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for C3orf79 Gene

No ASD Table

Relevant External Links for C3orf79 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for C3orf79 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for C3orf79 Gene

Protein differential expression in normal tissues from HIPED for C3orf79 Gene

This gene is overexpressed in Pancreas (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for C3orf79 Gene

Protein tissue co-expression partners for C3orf79 Gene

NURSA nuclear receptor signaling pathways regulating expression of C3orf79 Gene:


SOURCE GeneReport for Unigene cluster for C3orf79 Gene:

genes like me logo Genes that share expression patterns with C3orf79: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for C3orf79 Gene

Orthologs for C3orf79 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for C3orf79 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia C3H3orf79 34
  • 99.58 (n)
C3orf79 35
  • 99 (a)
Species where no ortholog for C3orf79 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C3orf79 Gene

Gene Tree for C3orf79 (if available)
Gene Tree for C3orf79 (if available)

Paralogs for C3orf79 Gene

No data available for Paralogs for C3orf79 Gene

Variants for C3orf79 Gene

Sequence variations from dbSNP and Humsavar for C3orf79 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs10513446 -- 153,490,334(-) TGAAA(A/T)TTAAC intron-variant
rs10935937 -- 153,495,815(+) TTTCT(A/T)ATTAA intron-variant
rs111683010 -- 153,493,280(+) TGTAA(G/T)ATGTC intron-variant
rs112405955 -- 153,482,604(+) CGGTA(G/T)AGTCA intron-variant, upstream-variant-2KB
rs112471027 -- 153,501,454(+) TACGA(C/T)TAGTG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for C3orf79 Gene

Variant ID Type Subtype PubMed ID
nsv592075 CNV gain 21841781
nsv526058 CNV loss 19592680
nsv460913 CNV gain 19166990
esv3598229 CNV loss 21293372
esv3598228 CNV loss 21293372
esv3569066 CNV loss 25503493
esv2677975 CNV deletion 23128226

Variation tolerance for C3orf79 Gene

Residual Variation Intolerance Score: 71.4% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 3.07; 50.68% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for C3orf79 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C3orf79 Gene

Disorders for C3orf79 Gene

Relevant External Links for C3orf79

Genetic Association Database (GAD)
Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for C3orf79 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C3orf79 Gene

Publications for C3orf79 Gene

  1. Common variants near MBNL1 and NKX2-5 are associated with infantile hypertrophic pyloric stenosis. (PMID: 22306654) Feenstra B. … Melbye M. (Nat. Genet. 2012) 46 64
  2. Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project. (PMID: 17903300) Fox C.S. … Atwood L.D. (BMC Med. Genet. 2007) 46 64
  3. The DNA sequence, annotation and analysis of human chromosome 3. (PMID: 16641997) Muzny D.M. … Gibbs R.A. (Nature 2006) 4 64

Products for C3orf79 Gene

Sources for C3orf79 Gene

Loading form....