C3orf79 Gene
protein-coding GIFtS: 30
GCID: GC03P153202 (predicted)
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chromosome 3 open reading frame 79
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Aliases
for C3orf79 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc,
7Ensembl,
8DME,
9miRBase,
and/or 10fRNAdb)
About This Section
|
| Aliases |
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| Chromosome 3 Open Reading Frame 791 2 | | Putative Uncharacterized Protein C3orf792 |
Export aliases for C3orf79 gene to outside databasesPrevious GC identifers: GC03P154685 GC03P150594 |
Summaries
for C3orf79 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
PharmGKB,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
|
-- |
Genomic Views
for C3orf79 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69),
Regulatory elements and Epigenetics data according to
QIAGEN,
SABiosciences, and/or
SwitchGear Genomics)
About This Section
| RefSeq DNA sequence:- NC_000003.11 NC_018914.1 NT_005612.16
Regulatory elements:
 Search SABiosciences Regulatory transcription factor binding sites for C3orf79
Other transcription factors
Search SABiosciences Chromatin IP Primers for C3orf79
Epigenetics:
| | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat C3orf79 |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 3q25.2 Ensembl cytogenetic band: 3q25.2 HGNC cytogenetic band: 3q25.2C3orf79 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc information about chromosome 3 GeneLoc Exon Structure GeneLoc location for GC03P153202: view genomic region
(about GC identifiers)
Start:
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153,202,284 bp from pter |
End:
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153,220,486 bp from pter |
Size:
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18,203 bases |
Orientation:
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plus strand |
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Proteins
for C3orf79 gene
(According to
1UniProtKB,
HORDE,
neXtProt,
Ensembl,
and/or Reactome,
Modification sites according to 2PhosphoSitePlus,
Specific Peptides from DME,
Protein expression images according to data from SPIRE MOPED and PaxDb,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
EMD Millipore,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological,
ProSpec, and/or
Uscn,
Biochemical Assays by
EMD Millipore,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene,
Antibodies by
EMD Millipore,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals,
Thermo Fisher Scientific,
Abcam, and/or
Uscn)
About This Section
|
UniProtKB/Swiss-Prot: CC079_HUMAN, P0CE67 (See
protein sequence)Recommended Name: Putative uncharacterized protein C3orf79 Size: 100 amino acids; 11337 DaExplore the universe of human proteins at neXtProt for C3orf79: NX_P0CE67
Post-translational modifications:
View modification sites using PhosphoSitePlus2View neXtProt modification sites for NX_P0CE67
C3orf79 Protein expression data from MOPED and PaxDb: About this image 
REFSEQ proteins: NP_001094807.1
ENSEMBL proteins: ENSP00000389475
Human Recombinant Protein Products:
C3orf79 Antibody Products:
Assay Products for C3orf79: |
Protein
Domains /
Families
for C3orf79 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| ProtoNet protein and cluster: P0CE67 |
Function
for C3orf79 gene
(According to 1UniProtKB,
Genatlas,
LifeMap Discovery™,
IUBMB, and/or
2DME,
Human phenotypes from GenomeRNAi,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene,
RNAi from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
microRNA from QIAGEN,
Gene Editing from DNA2.0,
Clones from EMD Millipore,
OriGene,
SwitchGear Genomics,
GenScript,
Sino Biological,
DNA2.0,
and Vector BioLabs,
Cell Lines from GenScript,
LifeMap BioReagents,
In Situ Hybridization Assays from Advanced Cell Diagnostics,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene.)
About This Section
|
Clone
Products: |  | Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore | |  | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for C3orf79
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for C3orf79
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling 
| |  | GenScript: all cDNA clones in your preferred vector: C3orf79 (NM_001101337) | |  | Browse Sino Biological Human cDNA Clones | |  | DNA2.0 Custom Codon Optimized Gene
Synthesis Service for C3orf79 | |  | Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat C3orf79 |
|
Pathways & Interactions
for C3orf79 gene
(Pathways according to
EMD Millipore,
R&D Systems,
Cell Signaling Technology,
KEGG,
PharmGKB,
BioSystems,
Reactome,
Tocris Bioscience,
GeneGo (Thomson Reuters),
QIAGEN,
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Interaction Networks according to
SABiosciences,
and/or STRING,
Interactions according to 1UniProtKB,
2MINT,
3I2D, and/or
4STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene).
About This Section
|
Interactions:
Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for C3orf79
|
Drugs & Compounds
for C3orf79 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
EMD Millipore, Tocris Bioscience
HMDB,
BitterDB, and/or
Novoseek, and Drugs according to
DrugBank,
Enzo Life Sciences, and/or
PharmGKB, with drugs/clinical trials/news
search links to CenterWatch)
About This Section
|
 Browse Tocris compounds for C3orf79
Search CenterWatch for drugs/clinical trials and news about C3orf79 / CC079
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Transcripts
for C3orf79 gene(Secondary structures according to
fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
shRNA from
OriGene,
microRNA from QIAGEN,
Tagged/untagged cDNA clones from
OriGene,
SwitchGear Genomics,
GenScript,
DNA2.0,
Vector BioLabs,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN
)
About This Section
|
REFSEQ mRNAs for C3orf79 gene: NM_001101337.1 Unigene Cluster for C3orf79: Chromosome 3 open reading frame 79 Hs.58586 [show with all ESTs]Unigene Representative Sequence: BG2194621 Ensembl transcript including schematic representation, and UCSC links where relevant: ENST00000446603(uc003ezt.3)
Clone
Products: | | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for C3orf79
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for C3orf79
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling
| | | GenScript: all cDNA clones in your preferred vector: C3orf79 (NM_001101337) | | | DNA2.0 Custom Codon Optimized Gene
Synthesis Service for C3orf79 | | | Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat C3orf79 |
Primer
Products: | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for C3orf79
Browse OriGene validated miRNA SYBR primer pairs
| | | SABiosciences RT2 qPCR Primer Assay in human, mouse / rat C3orf79 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat C3orf79 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat C3orf79 |
Additional cDNA sequence: AF086445.1 3 DOTS entries: DT.303193 DT.91719047 DT.95200186 24/36 AceView cDNA sequences (see all 36): BX103194 BG190426 W79557 BG209536 BG194487 W79525 AF086445 BG192968 BG216470 BG196048 BG192967 BG200129 BG213671 BG186111 BG184709 BG217438 BG188256 BG215297 BG210642 BG184068 BG190909 BG214760 BG220455 BG204726
GeneLoc Exon Structure
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Expression
for C3orf79 gene
(RNA expression data according to
H-InvDB,
NONCODE,
miRBase, and
RNAdb,
Expression images according to data from
BioGPS,
Illumina Human BodyMap, and
CGAP
SAGE,
Sets of similar genes according to GeneDecks,
in vivo and in vitro expression data from LifeMap Discovery™,
plus additional links to
Genevestigator, and/or
SOURCE, and/or
BioGPS, and/or
UniProtKB,
PCR Arrays from
SABiosciences,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN,
In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section
| C3orf79 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: CTTTAATTTC
About this image
See C3orf79 Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for C3orf79
SOURCE GeneReport for Unigene cluster: Hs.58586
SABiosciences Custom PCR Arrays for C3orf79
Primer
Products: | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for C3orf79
Browse OriGene validated miRNA SYBR primer pairs
| | | SABiosciences RT2 qPCR Primer Assay in human, mouse / rat C3orf79 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat C3orf79 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat C3orf79 |
Orthologs
for C3orf79 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
,
5MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase,
and/or
6Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam)
About This Section
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ENSEMBL Gene Tree for C3orf79 (if available)
TreeFam Gene Tree for C3orf79 (if available) |
Paralogs
for C3orf79 gene(Paralogs according to
1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section
| -- |
Genomic Variants
for C3orf79 gene(SNPs/Variants according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE,
UniProtKB, and
DNA2.0,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB), Blood group antigen gene mutations by BGMUT,
Resequencing Primers from QIAGEN,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section
|
| Genomic Data | Transcription Related Data | Allele Frequencies | | SNP ID | Valid | Clinical
significance | Chr 3 pos | Sequence | # | AA
Chg | Type | More | # | Allele
freq | Pop | Total
sample | More |
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HapMap Linkage Disequilibrium report for C3orf79 (153202284 - 153220486 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV) variations for C3orf79: -- | SABiosciences Cancer Mutation PCR Assays |
| | QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing C3orf79 |
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Disorders
/ Diseases
for C3orf79 gene
(in which this Gene is Involved, According to MalaCards,
OMIM, UniProtKB,
the University of Copenhagen DISEASES
database,
Genatlas, GeneTests,
GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
| -- |
Publications
for C3orf79 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6HMDB,
7DrugBank,
8UniProtKB/TrEMBL,
9 Novoseek, and/or
10fRNAdb)
About This Section
|
PubMed articles for C3orf79 gene integrated from 9 sources:
(articles sorted by number of sources associating them with C3orf79) | |  | Utopia: connect your pdf to the dynamic
world of online information |
- The DNA sequence, annotation and analysis of human chromosome 3. (PubMed id 16641997)2 Muzny D.M....Gibbs R.A. (2006)
- Hepatitis C virus core protein interacts with 14-3-3 protein and activates the kinase Raf-1. (PubMed id )2 Aoki H.... Hino O. (2000)
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External Searches for C3orf79 gene
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
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Genome Databases showing C3orf79 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
|
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Other Databases showing C3orf79 gene
(According to HUGE)
About This Section
| -- |
Specialized Databases showing C3orf79 gene(According to PharmGKB,
ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
| Name | Description |
| PharmGKB entry for C3orf79 | Pharmacogenomics, SNPs, Pathways |
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About This Section
| Patent Information for C3orf79 gene:
Search GeneIP for patents involving C3orf79
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for C3orf79 gene(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or
Enzo Life Sciences),
In Situ Hybridization Assays from
Advanced Cell Diagnostics
About This Section
|
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| | |  | Browse OriGene Antibodies | | OriGene shRNA RFP for C3orf79 | | | OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for C3orf79 | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for C3orf79 | | | OriGene Protein Over-expression Lysate for C3orf79 | | Browse OriGene Fluorogenic Cell Assay Kits | | | OriGene siRNA for C3orf79 | | Browse 3'-UTR reporter clones for miRNA target validation | | | OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for C3orf79 | | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for C3orf79 | | | Browse OriGene GFP tagged cDNA clones in CMV expression vector | | Browse OriGene MicroRNA Expression Plasmids | | | Browse OriGene basic RS shRNAs | | Browse OriGene validated miRNA SYBR primer pairs | | | Browse OriGene full length recombinant human proteins expressed in human HEK293 cells | | OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
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| | | QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat C3orf79 | | | QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing C3orf79 | | | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat C3orf79 | | | QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat C3orf79 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat C3orf79 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat C3orf79 |
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| | | | Search Tocris compounds for C3orf79 |
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 | | | C3orf79 Proteins, Antibodies, CLIAs, and ELISAs |
| | | |  |  |  | | | | Search ThermoFisher Antibodies for C3orf79 |
| | | Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat C3orf79 |
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