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Aliases for C3orf67 Gene

Aliases for C3orf67 Gene

  • Chromosome 3 Open Reading Frame 67 2 3 5

External Ids for C3orf67 Gene

Summaries for C3orf67 Gene

GeneCards Summary for C3orf67 Gene

C3orf67 (Chromosome 3 Open Reading Frame 67) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C3orf67 Gene

Genomics for C3orf67 Gene

Regulatory Elements for C3orf67 Gene

Promoters for C3orf67 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around C3orf67 on UCSC Golden Path with GeneCards custom track

Genomic Location for C3orf67 Gene

Chromosome:
3
Start:
58,717,365 bp from pter
End:
59,050,084 bp from pter
Size:
332,720 bases
Orientation:
Minus strand

Genomic View for C3orf67 Gene

Genes around C3orf67 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C3orf67 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C3orf67 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C3orf67 Gene

Proteins for C3orf67 Gene

  • Protein details for C3orf67 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6ZVT6-CC067_HUMAN
    Recommended name:
    Uncharacterized protein C3orf67
    Protein Accession:
    Q6ZVT6
    Secondary Accessions:
    • B9EKV6
    • Q6ZV69

    Protein attributes for C3orf67 Gene

    Size:
    689 amino acids
    Molecular mass:
    76271 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAC85994.1; Type=Erroneous initiation; Evidence={ECO:0000305};

    Alternative splice isoforms for C3orf67 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for C3orf67 Gene

Proteomics data for C3orf67 Gene at MOPED

Post-translational modifications for C3orf67 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for C3orf67 Gene

Domains & Families for C3orf67 Gene

Protein Domains for C3orf67 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for C3orf67 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C3orf67: view

No data available for Gene Families and UniProtKB/Swiss-Prot for C3orf67 Gene

Function for C3orf67 Gene

Animal Model Products

CRISPR Products

Inhibitory RNA Products

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C3orf67 Gene

Localization for C3orf67 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C3orf67 Gene COMPARTMENTS Subcellular localization image for C3orf67 gene
Compartment Confidence
extracellular 2
cytosol 1
lysosome 1
mitochondrion 1
nucleus 1
peroxisome 1
vacuole 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for C3orf67 Gene

Pathways & Interactions for C3orf67 Gene

SuperPathways for C3orf67 Gene

No Data Available

Interacting Proteins for C3orf67 Gene

Gene Ontology (GO) - Biological Process for C3orf67 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for C3orf67 Gene

Drugs & Compounds for C3orf67 Gene

No Compound Related Data Available

Transcripts for C3orf67 Gene

Unigene Clusters for C3orf67 Gene

Chromosome 3 open reading frame 67:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C3orf67 Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6a · 6b ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13a · 13b ^ 14
SP1: - - - - - -
SP2: - - -
SP3: -
SP4:

Relevant External Links for C3orf67 Gene

GeneLoc Exon Structure for
C3orf67
ECgene alternative splicing isoforms for
C3orf67

Expression for C3orf67 Gene

mRNA expression in normal human tissues for C3orf67 Gene

mRNA differential expression in normal tissues according to GTEx for C3orf67 Gene

This gene is overexpressed in Testis (x15.9) and Esophagus - Mucosa (x9.6).

Protein differential expression in normal tissues from HIPED for C3orf67 Gene

This gene is overexpressed in Plasma (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for C3orf67 Gene



SOURCE GeneReport for Unigene cluster for C3orf67 Gene Hs.368434

genes like me logo Genes that share expression patterns with C3orf67: view

Protein tissue co-expression partners for C3orf67 Gene

- Elite partner

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for C3orf67 Gene

Orthologs for C3orf67 Gene

This gene was present in the common ancestor of chordates.

Orthologs for C3orf67 Gene

Organism Taxonomy Gene Similarity Type Details
dog
(Canis familiaris)
Mammalia C20H3orf67 35
  • 86.33 (n)
  • 84.14 (a)
C3orf67 36
  • 84 (a)
OneToOne
mouse
(Mus musculus)
Mammalia 4930452B06Rik 35
  • 78.81 (n)
  • 74.5 (a)
4930452B06Rik 16
4930452B06Rik 36
  • 61 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia C3H3orf67 35
  • 99.17 (n)
  • 98.58 (a)
C3orf67 36
  • 99 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia LOC361016 35
  • 77.39 (n)
  • 72.09 (a)
cow
(Bos Taurus)
Mammalia C3orf67 36
  • 64 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia C3orf67 36
  • 51 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia C3orf67 36
  • 51 (a)
OneToOne
chicken
(Gallus gallus)
Aves C3orf67 36
  • 44 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia C3orf67 36
  • 39 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii Dr.19459 35
C6H3orf67 36
  • 25 (a)
OneToOne
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 17 (a)
OneToOne
Species with no ortholog for C3orf67:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for C3orf67 Gene

ENSEMBL:
Gene Tree for C3orf67 (if available)
TreeFam:
Gene Tree for C3orf67 (if available)

Paralogs for C3orf67 Gene

No data available for Paralogs for C3orf67 Gene

Variants for C3orf67 Gene

Sequence variations from dbSNP and Humsavar for C3orf67 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
VAR_056772 -
VAR_056773 -
VAR_061575 -
VAR_061576 -
rs795406 -- 58,815,082(-) tgatg(C/G)ctcca intron-variant

Structural Variations from Database of Genomic Variants (DGV) for C3orf67 Gene

Variant ID Type Subtype PubMed ID
nsv834704 CNV Loss 17160897
esv274884 CNV Gain+Loss 21479260
esv273797 CNV Insertion 20981092
nsv822104 CNV Loss 20364138
esv21695 CNV Loss 19812545
esv2422022 CNV Deletion 20811451
nsv511230 CNV Loss 21212237
dgv5144n71 CNV Gain 21882294
esv269662 CNV Insertion 20981092

Variation tolerance for C3orf67 Gene

Residual Variation Intolerance Score: 57.9% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 5.18; 69.67% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for C3orf67 Gene

HapMap Linkage Disequilibrium report
C3orf67

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C3orf67 Gene

Disorders for C3orf67 Gene

Relevant External Links for C3orf67

Genetic Association Database (GAD)
C3orf67
Human Genome Epidemiology (HuGE) Navigator
C3orf67
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
C3orf67

No disorders were found for C3orf67 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C3orf67 Gene

Publications for C3orf67 Gene

  1. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3 48 67
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for C3orf67 Gene

Sources for C3orf67 Gene

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