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Aliases for C3orf62 Gene

Aliases for C3orf62 Gene

  • Chromosome 3 Open Reading Frame 62 2 3

External Ids for C3orf62 Gene

Summaries for C3orf62 Gene

GeneCards Summary for C3orf62 Gene

C3orf62 (Chromosome 3 Open Reading Frame 62) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C3orf62 Gene

Genomics for C3orf62 Gene

Genomic Location for C3orf62 Gene

Start:
49,268,597 bp from pter
End:
49,277,909 bp from pter
Size:
9,313 bases
Orientation:
Minus strand

Genomic View for C3orf62 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C3orf62 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C3orf62 Gene

Regulatory Elements for C3orf62 Gene

Proteins for C3orf62 Gene

  • Protein details for C3orf62 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6ZUJ4-CC062_HUMAN
    Recommended name:
    Uncharacterized protein C3orf62
    Protein Accession:
    Q6ZUJ4
    Secondary Accessions:
    • Q6P7E9
    • Q7Z3X6

    Protein attributes for C3orf62 Gene

    Size:
    267 amino acids
    Molecular mass:
    30194 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C3orf62 Gene

Proteomics data for C3orf62 Gene at MOPED

Post-translational modifications for C3orf62 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C3orf62 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C3orf62 Gene

Domains for C3orf62 Gene

Protein Domains for C3orf62 Gene

ProtoNet:
genes like me logo Genes that share domains with C3orf62: view

No data available for Gene Families and UniProtKB/Swiss-Prot for C3orf62 Gene

Function for C3orf62 Gene

Gene Ontology (GO) - Molecular Function for C3orf62 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with C3orf62: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C3orf62 Gene

Localization for C3orf62 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C3orf62 Gene COMPARTMENTS Subcellular localization image for C3orf62 gene
Compartment Confidence
cytosol 2
nucleus 2
endoplasmic reticulum 1
extracellular 1
mitochondrion 1

No data available for Gene Ontology (GO) - Cellular Components for C3orf62 Gene

Pathways for C3orf62 Gene

SuperPathways for C3orf62 Gene

No Data Available

Gene Ontology (GO) - Biological Process for C3orf62 Gene

None

No data available for Pathways by source for C3orf62 Gene

Transcripts for C3orf62 Gene

mRNA/cDNA for C3orf62 Gene

Unigene Clusters for C3orf62 Gene

Chromosome 3 open reading frame 62:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C3orf62 Gene

ExUns: 1 ^ 2a · 2b · 2c ^ 3 ^ 4a · 4b · 4c
SP1: -
SP2:
SP3: -

Relevant External Links for C3orf62 Gene

GeneLoc Exon Structure for
C3orf62
ECgene alternative splicing isoforms for
C3orf62

Expression for C3orf62 Gene

mRNA expression in normal human tissues for C3orf62 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for C3orf62 Gene

This gene is overexpressed in Whole Blood (8.3).

SOURCE GeneReport for Unigene cluster for C3orf62 Gene Hs.403828

genes like me logo Genes that share expressions with C3orf62: view

Orthologs for C3orf62 Gene

This gene was present in the common ancestor of chordates.

Orthologs for C3orf62 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C3H3orf62 36
  • 99.13 (n)
  • 98.13 (a)
C3H3orf62 37
  • 98 (a)
OneToOne
cow
(Bos Taurus)
Mammalia C22H3orf62 36
  • 84.44 (n)
  • 82.35 (a)
C3orf62 37
  • 82 (a)
OneToOne
dog
(Canis familiaris)
Mammalia C20H3orf62 36
  • 86.02 (n)
  • 85.39 (a)
C3orf62 37
  • 74 (a)
OneToOne
mouse
(Mus musculus)
Mammalia 1700102P08Rik 36
  • 84.86 (n)
  • 80.48 (a)
1700102P08Rik 16
1700102P08Rik 37
  • 80 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia C3orf62 37
  • 66 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia LOC498675 36
  • 83.67 (n)
  • 81.27 (a)
lizard
(Anolis carolinensis)
Reptilia C3orf62 37
  • 31 (a)
OneToOne
Species with no ortholog for C3orf62:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C3orf62 Gene

ENSEMBL:
Gene Tree for C3orf62 (if available)
TreeFam:
Gene Tree for C3orf62 (if available)

Paralogs for C3orf62 Gene

No data available for Paralogs for C3orf62 Gene

Variants for C3orf62 Gene

Sequence variations from dbSNP and Humsavar for C3orf62 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type MAF
rs6771479 -- 49,275,180(+) aagat(A/C/T)tcagc intron-variant
rs10706165 -- 49,271,911(+) AAAAA(-/A)CAAAA intron-variant
rs11130187 -- 49,270,439(+) TGCAA(C/T)CTCTG utr-variant-3-prime
rs13077498 - 49,276,545(+) TCTCT(C/T)GGGGC missense, reference
rs13094114 -- 49,275,520(+) TGAAG(G/T)ttttt intron-variant

Relevant External Links for C3orf62 Gene

HapMap Linkage Disequilibrium report
C3orf62

No data available for Structural Variations from Database of Genomic Variants (DGV) for C3orf62 Gene

Disorders for C3orf62 Gene

No disorders were found for C3orf62 Gene.

No data available for UniProtKB/Swiss-Prot for C3orf62 Gene

Publications for C3orf62 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PMID: 17207965) Lamesch P. … Vidal M. (Genomics 2007) 3
  5. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) OlA!h J. … OvA!di J. (J. Biol. Chem. 2011) 3

Products for C3orf62 Gene

  • antibodies-online peptides for C3orf62
  • antibodies-online antibodies for C3orf62
  • antibodies-online kits for C3orf62

Sources for C3orf62 Gene

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