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Aliases for C3orf36 Gene

Aliases for C3orf36 Gene

  • Chromosome 3 Open Reading Frame 36 2 3

External Ids for C3orf36 Gene

Summaries for C3orf36 Gene

GeneCards Summary for C3orf36 Gene

C3orf36 (Chromosome 3 Open Reading Frame 36) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C3orf36 Gene

Genomics for C3orf36 Gene

Genomic Location for C3orf36 Gene

Start:
133,928,145 bp from pter
End:
133,929,812 bp from pter
Size:
1,668 bases
Orientation:
Minus strand

Genomic View for C3orf36 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C3orf36 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C3orf36 Gene

Regulatory Elements for C3orf36 Gene

Proteins for C3orf36 Gene

  • Protein details for C3orf36 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q3SXR2-CC036_HUMAN
    Recommended name:
    Uncharacterized protein C3orf36
    Protein Accession:
    Q3SXR2
    Secondary Accessions:
    • Q3SXR3
    • Q9H6K8

    Protein attributes for C3orf36 Gene

    Size:
    165 amino acids
    Molecular mass:
    16908 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C3orf36 Gene

Proteomics data for C3orf36 Gene at MOPED

Post-translational modifications for C3orf36 Gene

No Post-translational modifications

Other Protein References for C3orf36 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C3orf36 Gene

Domains for C3orf36 Gene

Protein Domains for C3orf36 Gene

ProtoNet:
genes like me logo Genes that share domains with C3orf36: view

No data available for Gene Families and UniProtKB/Swiss-Prot for C3orf36 Gene

Function for C3orf36 Gene

miRNA for C3orf36 Gene

miRTarBase miRNAs that target C3orf36

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for C3orf36 Gene

Localization for C3orf36 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C3orf36 Gene COMPARTMENTS Subcellular localization image for C3orf36 gene
Compartment Confidence
extracellular 2
nucleus 2
cytosol 1

No data available for Gene Ontology (GO) - Cellular Components for C3orf36 Gene

Pathways for C3orf36 Gene

SuperPathways for C3orf36 Gene

No Data Available

Interacting Proteins for C3orf36 Gene

Gene Ontology (GO) - Biological Process for C3orf36 Gene

None

No data available for Pathways by source for C3orf36 Gene

Transcripts for C3orf36 Gene

mRNA/cDNA for C3orf36 Gene

(1) REFSEQ mRNAs :
(7) Additional mRNA sequences :
(9) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for C3orf36 Gene

Chromosome 3 open reading frame 36:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C3orf36 Gene

No ASD Table

Relevant External Links for C3orf36 Gene

GeneLoc Exon Structure for
C3orf36
ECgene alternative splicing isoforms for
C3orf36

Expression for C3orf36 Gene

mRNA expression in normal human tissues for C3orf36 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for C3orf36 Gene

This gene is overexpressed in Lung (10.1) and Kidney - Cortex (4.0).

SOURCE GeneReport for Unigene cluster for C3orf36 Gene Hs.287691

genes like me logo Genes that share expressions with C3orf36: view

Orthologs for C3orf36 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for C3orf36 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C3H3orf36 36
  • 99.19 (n)
  • 97.58 (a)
Species with no ortholog for C3orf36:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C3orf36 Gene

ENSEMBL:
Gene Tree for C3orf36 (if available)
TreeFam:
Gene Tree for C3orf36 (if available)

Paralogs for C3orf36 Gene

No data available for Paralogs for C3orf36 Gene

Variants for C3orf36 Gene

Sequence variations from dbSNP and Humsavar for C3orf36 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type MAF
rs3811661 -- 133,929,379(-) TCAAG(A/G)AAAGG utr-variant-5-prime
rs3811662 -- 133,929,345(-) GCTGG(A/G)GCAAA utr-variant-5-prime
rs6808547 -- 133,927,806(+) TCCGC(A/G)CCTTT downstream-variant-500B
rs9814875 -- 133,931,306(+) GTAGG(A/G)TTTCC upstream-variant-2KB
rs9830010 -- 133,930,841(+) CCATT(C/T)TAGTC upstream-variant-2KB

Relevant External Links for C3orf36 Gene

HapMap Linkage Disequilibrium report
C3orf36

No data available for Structural Variations from Database of Genomic Variants (DGV) for C3orf36 Gene

Disorders for C3orf36 Gene

No disorders were found for C3orf36 Gene.

No data available for UniProtKB/Swiss-Prot for C3orf36 Gene

Publications for C3orf36 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) OlA!h J. … OvA!di J. (J. Biol. Chem. 2011) 3

Products for C3orf36 Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate C3orf36
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for C3orf36
    • Block miRNA regulation of C3orf36 using miScript Target Protectors

    Sources for C3orf36 Gene

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