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Category Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21

GIFtS
-

C3orf33 Gene

protein-coding GIFtS: 43
GCID: GC03M155480

chromosome 3 open reading frame 33

Search for C3orf33
in

MalaCards

our new
Human Malady Compendium

(According to ¹HGNC, ²Entrez Gene,
³UniProtKB/Swiss-Prot, ⁴UniProtKB/TrEMBL, ⁵OMIM, ⁶GeneLoc, ⁷Ensembl, ⁸DME, ⁹miRBase, and/or ¹⁰fRNAdb)
About This Section

Aliases
Chromosome 3 Open Reading Frame 33¹ ²
AC3-33¹ ²
FLJ31139¹
AP-1 Activity Suppressor²
Uncharacterized Protein C3orf33²

External Ids:	HGNC: 26434¹	Entrez Gene: 285315²	Ensembl: ENSG00000174928⁷	UniProtKB: Q6P1S2³

Export aliases for C3orf33 gene to outside databases

Previous GC identifers: GC03M156964 GC03M152875

(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section

RefSeq DNA sequence:

NC_000003.11 NC_018914.1 NT_005612.16

Regulatory elements:

SABiosciences Regulatory transcription factor binding sites in the C3orf33 gene promoter:
SRF NF-1/L NF-1 SRF (504 AA) HNF-1 HNF-1A
Other transcription factors

Browse SwitchGear Promoter luciferase reporter plasmids

Search SABiosciences Chromatin IP Primers for C3orf33

Epigenetics:

QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat C3orf33

Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 3q25.31 Ensembl cytogenetic band: 3q25.31 HGNC cytogenetic band: 3q25.31

C3orf33 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
C3orf33 gene location

GeneLoc information about chromosome 3 GeneLoc Exon Structure

GeneLoc location for GC03M155480: view genomic region (about GC identifiers)

Start:	155,480,401 bp from pter	End:	155,524,140 bp from pter
Size:	43,740 bases	Orientation:	minus strand

(According to ¹UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to ²PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: CC033_HUMAN, Q6P1S2 (See protein sequence)

Recommended Name: Uncharacterized protein C3orf33

Size: 294 amino acids; 33765 Da

Subcellular location: Membrane; Single-pass membrane protein (Potential)

Sequence caution: Sequence=AAO06952.1; Type=Erroneous initiation; Note=Translation N-terminally extended;

Secondary accessions: A8K1H5 Q86YE6 Q8IXA7 Q96NB5

Alternative splicing: 2 isoforms: Q6P1S2-1 Q6P1S2-2 (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for C3orf33: NX_Q6P1S2

Post-translational modifications:

View modification sites using PhosphoSitePlus²

View neXtProt modification sites for NX_Q6P1S2

C3orf33 Protein expression data from MOPED and PaxDb: About this image

REFSEQ proteins: NP_775928.1

ENSEMBL proteins:

ENSP00000418410 ENSP00000342512 ENSP00000420246 ENSP00000417361 ENSP00000445446

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	Uscn Proteins for C3orf33

Gene Ontology (GO): 1 cellular component term (GO ID links to tree view): About this table

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0016021	integral to membrane	IEA	--

C3orf33 for ontologies About GeneDecksing

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(According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
About This Section

C3orf33 for domains About GeneDecksing

1 InterPro domain/family:

IPR006021 Staphylococcal_nuclease

Graphical View of Domain Structure for InterPro Entry Q6P1S2

ProtoNet protein and cluster: Q6P1S2

(According to ¹UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or ²DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
About This Section

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Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view): About this table

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0003676	nucleic acid binding	IEA	--
GO:0016788	hydrolase activity, acting on ester bonds	IEA	--

C3orf33 for ontologies About GeneDecksing

2 GenomeRNAi human phenotypes for C3orf33:

Increased cell number in G2M,

Synthetic lethal with Ras

(Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to ¹UniProtKB, ²MINT, ³I2D, and/or ⁴STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
About This Section

Interactions:

Search SABiosciences Gene Network Central^TM Interacting Genes and Proteins Networks for C3orf33

STRING Interaction Network Preview (showing 1 interactants - click image to see more details)

1 Interacting protein for C3orf33 (ENSP00000342512⁴) via UniProtKB, MINT, STRING, and/or I2D

Interactant		Interaction Details
GeneCard	External ID(s)	Interaction Details
ELAVL1	ENSP00000385269⁴	STRING: ENSP00000385269

About this table

(Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
About This Section

Browse Small Molecules at EMD Millipore

Browse drugs & compounds from Enzo Life Sciences

Browse Tocris compounds for C3orf33
Search CenterWatch for drugs/clinical trials and news about C3orf33 / CC033

(Secondary structures according to fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
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About This Section

REFSEQ mRNAs for C3orf33 gene:

NM_173657.1

Unigene Cluster for C3orf33:

Chromosome 3 open reading frame 33

Hs.350846 [show with all ESTs]

Unigene Representative Sequence: NM_173657

5 Ensembl transcripts including schematic representations, and UCSC links where relevant:

ENST00000482061 ENST00000340171 ENST00000465810 ENST00000486435 ENST00000534941(uc003fal.1 uc003fam.1)

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Additional cDNA sequence:

AF115515.1 AK055701.1 AK289890.1 AL832165.1 BC042198.1 BC064898.1

4 DOTS entries:

DT.432430 DT.100744765 DT.97828343 DT.91676295

19 AceView cDNA sequences:

BQ435341 AA405576 BC064898 AK055701 NM_173657 BU153473 BC042198 AI929652

CB962222 AF115515 AI961264 AL832165 AA405529 BI257957 CD250833 BI870387

BF792667 H55939 BQ441290

GeneLoc Exon Structure

(RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section

C3orf33 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: GAGTTTCGCT

About this image
See C3orf33 Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for C3orf33

SOURCE GeneReport for Unigene cluster: Hs.350846

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In Situ
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(Orthologs according to ^1,2HomoloGene (²older version, for species not in ¹newer version), ³euGenes, ⁴SGD , ⁵MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or ⁶Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
About This Section

This gene was present in the common ancestor of animals.

Orthologs for C3orf33 gene from 5/14 species (see all 14) About this table

Organism	Taxonomic classification	Gene	Description	Human Similarity	Orthology Type	Details
mouse (Mus musculus)	Mammalia	E130311K13Rik^{1 , 5}	RIKEN cDNA E130311K13 gene^{1, 5}	80.88(n)¹ 74.9(a)¹		3 (30.08 cM)⁵ 329659¹ NM_177856.4¹ NP_808524.1¹ 63914684⁵
chicken (Gallus gallus)	Aves	LOC100859600¹	uncharacterized LOC100859600	59.61(n) 54.5(a)		100859600 XM_003641798.1 XP_003641846.1
lizard (Anolis carolinensis)	Reptilia	C3orf33⁶	--	59(a)	1 ↔ 1	3(15864627-15868088)
zebrafish (Danio rerio)	Actinopterygii	c3orf33¹	c3orf33 homolog (H. sapiens)	49.43(n) 41.95(a)		565816 NM_001144796.1 NP_001138268.1
worm (Caenorhabditis elegans)	Secernentea	W09H1.3⁶ F32A11.1⁶	Protein F32A11.1	29(a) 21(a)	many → 1 many → 1	II(13184359-13184953) II(13157265-13160358)

ENSEMBL Gene Tree for C3orf33 (if available)
TreeFam Gene Tree for C3orf33 (if available)

(Paralogs according to ¹HomoloGene,
²Ensembl, and ³SIMAP, Pseudogenes according to ⁴Pseudogene.org Build 68)
About This Section

(SNPs/Variants according to the ¹NCBI SNP Database, ²Ensembl, ³PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section

SNP ID	Valid	Clinical significance	Chr 3 pos	Sequence	#	AA Chg	Type	More	#	Allele freq	Pop	Total sample	More
Genomic Data					Transcription Related Data				Allele Frequencies
				--	--	--		--	--
rs148847604^1,2		--	155479913(+)	`TTTCTA/GTCCTC`	1	--	ds500¹		0	--	--	--	--
rs143788468^1,2		--	155479978(+)	`CAGAGA/GCTCAC`	1	--	ds500¹		0	--	--	--	--
rs113111689^1,2	C,	--	155479982(+)	`GCTCACT/-CTGTC`	1	--	ds500¹		1		CSA	2
rs148136615^1,2		--	155480000(+)	`CAGGAA/GTGCAG`	1	--	ds500¹		0	--	--	--	--
rs141927965^1,2		--	155480086(+)	`TGGGAA/TTACAG`	1	--	ds500¹		0	--	--	--	--
rs181303787^1,2		--	155480091(+)	`TTACAC/GGTGTG`	1	--	ds500¹		0	--	--	--	--
rs113974115^1,2		--	155480098(+)	`TGTGAC/GCCACC`	1	--	ds500¹		2		CSA WA	120
rs114877105^1,2	F,	--	155480160(+)	`CCAGGC/ATGGTC`	1	--	ds500¹		2		WA NA	238
rs185942410^1,2		--	155480166(+)	`TGGTCA/GTTGGT`	1	--	ds500¹		0	--	--	--	--
rs145175478^1,2		--	155480254(+)	`CCAGCG/TAGTAC`	1	--	ds500¹		0	--	--	--	--

HapMap Linkage Disequilibrium report for C3orf33 (155480401 - 155524140 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV): 8 variations for C3orf33
7 CNVs: 37723 91650 50971 63625 9458 2481 7374
1 Indel: 59101

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(in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
About This Section

(in PubMed. Associations of this gene to articles via ¹Entrez Gene, ²UniProtKB/Swiss-Prot, ³HGNC, ⁴GAD, ⁵PharmGKB, ⁶HMDB, ⁷DrugBank, ⁸UniProtKB/TrEMBL, ⁹ Novoseek, and/or ¹⁰fRNAdb)
About This Section

PubMed articles for C3orf33 gene integrated from 9 sources:
(articles sorted by number of sources associating them with C3orf33)

Utopia: connect your pdf to the dynamic
world of online information

AC3-33, a novel secretory protein, inhibits Elk1 tran scriptional activity via ERK pathway. (PubMed id 20680465)^{1, 3} Hao D....Zhang X. (2010)
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)^{1, 2} Gerhard D.S....Malek J. (2004)
Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)^{1, 2} Ota T.... Sugano S. (2004)
Prokaryotic expression and characterization of human AC3-33 protein. (PubMed id 20515784)^{1, 9} Zhang X....Yang W. (2010)
Interactions of pathological hallmark proteins: tubul in polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PubMed id 21832049)¹ OlA!h J....OvA!di J. (2011)
Ubiquitin-mediated proteolysis of HuR by heat shock. (PubMed id 19322201)¹ Abdelmohsen K....Gorospe M. (2009)
[Molecular cloning and preliminary function study of a novel human gene AC3-33 related to suppress AP-1 activity] (PubMed id 18487146)¹ Liu P....Zhang X.J. (2008)
The DNA sequence, annotation and analysis of human chromosome 3. (PubMed id 16641997)² Muzny D.M....Gibbs R.A. (2006)
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)¹ Strausberg R.L....Marra M.A. (2002)

(in PubMed, OMIM, and NCBI Bookshelf)
About This Section

		AND	OR
Aliases
Free Text

Query String		PubMed OMIM NCBI Bookshelf
	(Note: In FireFox, select the above section and copy using Ctrl-C)

(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
About This Section

Entrez Gene: 285315	HGNC: 26434	AceView: FLJ31139	Ensembl:ENSG00000174928	euGenes: HUgn285315
ECgene: C3orf33	H-InvDB: C3orf33

(According to HUGE)
About This Section

(According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section

Name	Description
PharmGKB entry for C3orf33	Pharmacogenomics, SNPs, Pathways

Intellectual Property for C3orf33 gene
(Patent information from GeneIP, Licensable technologies from WIS Yeda, Salk, Tufts, IP news from LifeMap Sciences, Inc.)

About This Section

Patent Information for C3orf33 gene:
Search GeneIP for patents involving C3orf33

GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search

(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
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About This Section


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GeneCards Homepage - Last full update: 18 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013

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Category			VWF (GIFTS: 73) von Willebrand factor
GIFtS Group

The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

The GeneCards Human Gene Database

Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

Hot genes Disease genes C3orf33 gene at Home site.

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C3orf33 Gene

chromosome 3 open reading frame 33

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C3orf33 Gene

chromosome 3 open reading frame 33

Aliasesfor C3orf33 gene

Summariesfor C3orf33 gene

Genomic Viewsfor C3orf33 gene

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for C3orf33 gene

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for C3orf33 gene

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for C3orf33 gene

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for C3orf33 gene

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