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Aliases for C3orf30 Gene

Aliases for C3orf30 Gene

  • Chromosome 3 Open Reading Frame 30 2 3 5
  • Uncharacterized Protein C3orf30 3
  • TSCPA 3

External Ids for C3orf30 Gene

Previous GeneCards Identifiers for C3orf30 Gene

  • GC03P120348
  • GC03P118864
  • GC03P116240

Summaries for C3orf30 Gene

GeneCards Summary for C3orf30 Gene

C3orf30 (Chromosome 3 Open Reading Frame 30) is a Protein Coding gene. An important paralog of this gene is ENSG00000251012.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C3orf30 Gene

Genomics for C3orf30 Gene

Regulatory Elements for C3orf30 Gene

Genomic Location for C3orf30 Gene

119,146,150 bp from pter
119,160,042 bp from pter
13,893 bases
Plus strand

Genomic View for C3orf30 Gene

Genes around C3orf30 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C3orf30 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C3orf30 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C3orf30 Gene

Proteins for C3orf30 Gene

  • Protein details for C3orf30 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Uncharacterized protein C3orf30
    Protein Accession:
    Secondary Accessions:
    • A1L4B7

    Protein attributes for C3orf30 Gene

    536 amino acids
    Molecular mass:
    60162 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C3orf30 Gene

Post-translational modifications for C3orf30 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C3orf30 Gene

No data available for DME Specific Peptides for C3orf30 Gene

Domains & Families for C3orf30 Gene

Protein Domains for C3orf30 Gene


Suggested Antigen Peptide Sequences for C3orf30 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C3orf30: view

No data available for Gene Families and UniProtKB/Swiss-Prot for C3orf30 Gene

Function for C3orf30 Gene

Phenotypes for C3orf30 Gene

GenomeRNAi human phenotypes for C3orf30:
genes like me logo Genes that share phenotypes with C3orf30: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for C3orf30 Gene

Localization for C3orf30 Gene

Subcellular locations from

Jensen Localization Image for C3orf30 Gene COMPARTMENTS Subcellular localization image for C3orf30 gene
Compartment Confidence
nucleus 3
cytosol 2
golgi apparatus 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for C3orf30 Gene

Pathways & Interactions for C3orf30 Gene

SuperPathways for C3orf30 Gene

No Data Available

Interacting Proteins for C3orf30 Gene

Gene Ontology (GO) - Biological Process for C3orf30 Gene


No data available for Pathways by source and SIGNOR curated interactions for C3orf30 Gene

Drugs & Compounds for C3orf30 Gene

No Compound Related Data Available

Transcripts for C3orf30 Gene

mRNA/cDNA for C3orf30 Gene

Unigene Clusters for C3orf30 Gene

Chromosome 3 open reading frame 30:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for C3orf30 Gene

ExUns: 1a · 1b · 1c ^ 2a · 2b ^ 3a · 3b
SP2: - -
SP3: -

Relevant External Links for C3orf30 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for C3orf30 Gene

mRNA expression in normal human tissues for C3orf30 Gene

mRNA differential expression in normal tissues according to GTEx for C3orf30 Gene

This gene is overexpressed in Testis (x52.6).

Protein differential expression in normal tissues from HIPED for C3orf30 Gene

This gene is overexpressed in Heart (57.2).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for C3orf30 Gene

Protein tissue co-expression partners for C3orf30 Gene

NURSA nuclear receptor signaling pathways regulating expression of C3orf30 Gene:


SOURCE GeneReport for Unigene cluster for C3orf30 Gene:

genes like me logo Genes that share expression patterns with C3orf30: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for C3orf30 Gene

Orthologs for C3orf30 Gene

This gene was present in the common ancestor of chordates.

Orthologs for C3orf30 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia C1H3orf30 34
  • 63.92 (n)
  • 44.9 (a)
C3orf30 35
  • 47 (a)
(Canis familiaris)
Mammalia C33H3orf30 34
  • 67.04 (n)
  • 49.22 (a)
C3orf30 35
  • 41 (a)
(Mus musculus)
Mammalia 4930435E12Rik 34
  • 62.35 (n)
  • 44.98 (a)
4930435E12Rik 16
4930435E12Rik 35
  • 38 (a)
(Pan troglodytes)
Mammalia C3H3orf30 34
  • 99.13 (n)
  • 98.32 (a)
(Rattus norvegicus)
Mammalia RGD1306995 34
  • 61.26 (n)
  • 45.45 (a)
(Gallus gallus)
Aves C3orf30 35
  • 24 (a)
(Anolis carolinensis)
Reptilia C3orf30 35
  • 80 (a)
(Danio rerio)
Actinopterygii C5H3orf30 35
  • 37 (a)
Species where no ortholog for C3orf30 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for C3orf30 Gene

Gene Tree for C3orf30 (if available)
Gene Tree for C3orf30 (if available)

Paralogs for C3orf30 Gene

Paralogs for C3orf30 Gene

genes like me logo Genes that share paralogs with C3orf30: view

Variants for C3orf30 Gene

Sequence variations from dbSNP and Humsavar for C3orf30 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
VAR_028841 -
VAR_028842 -
VAR_028843 -
VAR_028844 -
rs9289122 - 119,148,200(+) ATTGA(C/G)CAAGG reference, missense

Structural Variations from Database of Genomic Variants (DGV) for C3orf30 Gene

Variant ID Type Subtype PubMed ID
esv25249 CNV loss 19812545
esv3597552 CNV loss 21293372
esv3597553 CNV loss 21293372
nsv829692 CNV loss 17160897

Variation tolerance for C3orf30 Gene

Residual Variation Intolerance Score: 96.4% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 9.91; 89.79% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for C3orf30 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C3orf30 Gene

Disorders for C3orf30 Gene

Relevant External Links for C3orf30

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for C3orf30 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C3orf30 Gene

Publications for C3orf30 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 65
  2. Expression profile of a novel germ cell-specific gene, TSCPA, in mice and human. (PMID: 19821082) Yu Z. … Cai Z. (J. Huazhong Univ. Sci. Technol. Med. Sci. 2009) 3 65
  3. The DNA sequence, annotation and analysis of human chromosome 3. (PMID: 16641997) Muzny D.M. … Gibbs R.A. (Nature 2006) 4 65
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4 65
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 65

Products for C3orf30 Gene

Sources for C3orf30 Gene

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