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Aliases for C3P1 Gene

Aliases for C3P1 Gene

  • Complement Component 3 Precursor Pseudogene 2 3
  • CPLP 3

External Ids for C3P1 Gene

Previous GeneCards Identifiers for C3P1 Gene

  • GC19P010013
  • GC19P010148
  • GC19P009734

Summaries for C3P1 Gene

GeneCards Summary for C3P1 Gene

C3P1 (Complement Component 3 Precursor Pseudogene) is a Pseudogene. GO annotations related to this gene include endopeptidase inhibitor activity.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C3P1 Gene

Genomics for C3P1 Gene

Regulatory Elements for C3P1 Gene

Genomic Location for C3P1 Gene

Start:
10,037,803 bp from pter
End:
10,074,138 bp from pter
Size:
36,336 bases
Orientation:
Plus strand

Genomic View for C3P1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C3P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C3P1 Gene

Proteins for C3P1 Gene

  • Protein details for C3P1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6ZMU1-C3P1_HUMAN
    Recommended name:
    Putative protein C3P1
    Protein Accession:
    Q6ZMU1
    Secondary Accessions:

    Protein attributes for C3P1 Gene

    Size:
    363 amino acids
    Molecular mass:
    40197 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C3P1 Gene

Proteomics data for C3P1 Gene at MOPED

Post-translational modifications for C3P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for C3P1 Gene

Domains for C3P1 Gene

Protein Domains for C3P1 Gene

Suggested Antigen Peptide Sequences for C3P1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C3P1: view

No data available for Gene Families and UniProtKB/Swiss-Prot for C3P1 Gene

Function for C3P1 Gene

Gene Ontology (GO) - Molecular Function for C3P1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004866 endopeptidase inhibitor activity IEA --
genes like me logo Genes that share ontologies with C3P1: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C3P1 Gene

Localization for C3P1 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C3P1 Gene COMPARTMENTS Subcellular localization image for C3P1 gene
Compartment Confidence
extracellular 3
mitochondrion 2
cytosol 1
nucleus 1

Gene Ontology (GO) - Cellular Components for C3P1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005615 extracellular space IEA --
genes like me logo Genes that share ontologies with C3P1: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for C3P1 Gene

Pathways for C3P1 Gene

SuperPathways for C3P1 Gene

No Data Available

Interacting Proteins for C3P1 Gene

Gene Ontology (GO) - Biological Process for C3P1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0010951 negative regulation of endopeptidase activity IEA --
genes like me logo Genes that share ontologies with C3P1: view

No data available for Pathways by source for C3P1 Gene

Transcripts for C3P1 Gene

mRNA/cDNA for C3P1 Gene

(2) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(1) REFSEQ mRNAs :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for C3P1 Gene

Complement component 3 precursor pseudogene:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for C3P1

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for C3P1
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for C3P1 Gene

No ASD Table

Relevant External Links for C3P1 Gene

GeneLoc Exon Structure for
C3P1
ECgene alternative splicing isoforms for
C3P1

Expression for C3P1 Gene

mRNA expression in normal human tissues for C3P1 Gene

mRNA differential expression in normal tissues according to GTEx for C3P1 Gene

This gene is overexpressed in Liver (52.6).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for C3P1 Gene

SOURCE GeneReport for Unigene cluster for C3P1 Gene Hs.655363

genes like me logo Genes that share expressions with C3P1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for C3P1 Gene

Orthologs for C3P1 Gene

Evolution for C3P1 Gene

ENSEMBL:
Gene Tree for C3P1 (if available)
TreeFam:
Gene Tree for C3P1 (if available)

No data available for Orthologs for C3P1 Gene

Paralogs for C3P1 Gene

Selected SIMAP similar genes for C3P1 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with C3P1: view

No data available for Paralogs for C3P1 Gene

Variants for C3P1 Gene

Sequence variations from dbSNP and Humsavar for C3P1 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs897803 -- 10,068,981(-) TCTCA(C/T)CTCCC nc-transcript-variant
rs967921 -- 10,068,075(-) CACAC(C/T)CCTCC intron-variant
rs967922 -- 10,067,819(-) TCTGC(C/T)GGGCC intron-variant
rs1840840 -- 10,041,141(+) GGAAT(C/T)GTCCT upstream-variant-2KB
rs1993466 - 10,058,569(+) ACAGG(A/G)TGGCT nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for C3P1 Gene

Variant ID Type Subtype PubMed ID
dgv3724n71 CNV Gain 21882294
nsv911027 CNV Loss 21882294
esv2558738 CNV Deletion 19546169
nsv458355 CNV Loss 19166990
nsv2414 CNV Insertion 18451855

Relevant External Links for C3P1 Gene

HapMap Linkage Disequilibrium report
C3P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C3P1 Gene

Disorders for C3P1 Gene

No disorders were found for C3P1 Gene.

No data available for UniProtKB/Swiss-Prot for C3P1 Gene

Publications for C3P1 Gene

  1. Insight into hepatocellular carcinogenesis at transcriptome level by comparing gene expression profiles of hepatocellular carcinoma with those of corresponding noncancerous liver. (PMID: 11752456) Xu X.R. … Han Z.G. (Proc. Natl. Acad. Sci. U.S.A. 2001) 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. A genomic analysis of rat proteases and protease inhibitors. (PMID: 15060002) Puente X.S. … Lopez-Otin C. (Genome Res. 2004) 3
  4. Identification of intrahepatic cholangiocarcinoma related genes by comparison with normal liver tissues using expressed sequence tags. (PMID: 16712791) Wang A.G. … Kim N.S. (Biochem. Biophys. Res. Commun. 2006) 3
  5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 4

Products for C3P1 Gene

Sources for C3P1 Gene

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