Free for academic non-profit institutions. Other users need a Commercial license

Aliases for C2orf61 Gene

Aliases for C2orf61 Gene

  • Chromosome 2 Open Reading Frame 61 2 3

External Ids for C2orf61 Gene

Previous GeneCards Identifiers for C2orf61 Gene

  • GC02M047209
  • GC02M047314
  • GC02M047273

Summaries for C2orf61 Gene

GeneCards Summary for C2orf61 Gene

C2orf61 (Chromosome 2 Open Reading Frame 61) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C2orf61 Gene

Genomics for C2orf61 Gene

Regulatory Elements for C2orf61 Gene

Genomic Location for C2orf61 Gene

Start:
47,045,538 bp from pter
End:
47,155,378 bp from pter
Size:
109,841 bases
Orientation:
Minus strand

Genomic View for C2orf61 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C2orf61 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C2orf61 Gene

Proteins for C2orf61 Gene

  • Protein details for C2orf61 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8N801-CB061_HUMAN
    Recommended name:
    Uncharacterized protein C2orf61
    Protein Accession:
    Q8N801
    Secondary Accessions:
    • H7C2Z2

    Protein attributes for C2orf61 Gene

    Size:
    248 amino acids
    Molecular mass:
    27807 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for C2orf61 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for C2orf61 Gene

Proteomics data for C2orf61 Gene at MOPED

Post-translational modifications for C2orf61 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C2orf61 Gene

No data available for DME Specific Peptides for C2orf61 Gene

Domains for C2orf61 Gene

Protein Domains for C2orf61 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C2orf61: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C2orf61 Gene

Function for C2orf61 Gene

Animal Model Products

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for C2orf61

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C2orf61 Gene

Localization for C2orf61 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C2orf61 Gene COMPARTMENTS Subcellular localization image for C2orf61 gene
Compartment Confidence
nucleus 3
cytosol 2

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for C2orf61 Gene

Pathways for C2orf61 Gene

SuperPathways for C2orf61 Gene

No Data Available

Interacting Proteins for C2orf61 Gene

Gene Ontology (GO) - Biological Process for C2orf61 Gene

None

No data available for Pathways by source for C2orf61 Gene

Transcripts for C2orf61 Gene

mRNA/cDNA for C2orf61 Gene

(1) Additional mRNA sequences :
(4) Selected AceView cDNA sequences:
(2) REFSEQ mRNAs :
(6) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for C2orf61 Gene

Chromosome 2 open reading frame 61:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for C2orf61

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for C2orf61

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for C2orf61 Gene

No ASD Table

Relevant External Links for C2orf61 Gene

GeneLoc Exon Structure for
C2orf61
ECgene alternative splicing isoforms for
C2orf61

Expression for C2orf61 Gene

mRNA expression in normal human tissues for C2orf61 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for C2orf61 Gene

This gene is overexpressed in Testis (44.7).

SOURCE GeneReport for Unigene cluster for C2orf61 Gene Hs.531575

genes like me logo Genes that share expressions with C2orf61: view

In Situ Assay Products

No data available for Protein expression and mRNA Expression by UniProt/SwissProt for C2orf61 Gene

Orthologs for C2orf61 Gene

This gene was present in the common ancestor of chordates.

Orthologs for C2orf61 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C2AH2orf61 35
  • 99.42 (n)
  • 98.84 (a)
C2orf61 36
  • 99 (a)
OneToOne
dog
(Canis familiaris)
Mammalia C10H2orf61 35
  • 85.7 (n)
  • 84.55 (a)
C2orf61 36
  • 89 (a)
OneToOne
mouse
(Mus musculus)
Mammalia 1700011E24Rik 35
  • 77.69 (n)
  • 71.07 (a)
1700011E24Rik 16
1700011E24Rik 36
  • 68 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia C2orf61 36
  • 57 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia C2orf61 36
  • 58 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia LOC681766 35
  • 76.45 (n)
  • 71.07 (a)
lizard
(Anolis carolinensis)
Reptilia C2orf61 36
  • 37 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia LOC100497472 35
  • 53.27 (n)
  • 43.06 (a)
zebrafish
(Danio rerio)
Actinopterygii C2orf61 36
  • 33 (a)
OneToOne
LOC100332264 35
  • 45.85 (n)
  • 39.37 (a)
sea squirt
(Ciona savignyi)
Ascidiacea CSA.4094 36
  • 30 (a)
OneToOne
Species with no ortholog for C2orf61:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for C2orf61 Gene

ENSEMBL:
Gene Tree for C2orf61 (if available)
TreeFam:
Gene Tree for C2orf61 (if available)

Paralogs for C2orf61 Gene

No data available for Paralogs for C2orf61 Gene

Variants for C2orf61 Gene

Sequence variations from dbSNP and Humsavar for C2orf61 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type MAF
rs726117 -- 47,145,286(+) CACTG(A/G)AATTT intron-variant
rs726118 -- 47,145,335(+) CACCT(C/T)ACTCC intron-variant
rs815803 -- 47,157,284(-) atgca(A/G)aatct upstream-variant-2KB
rs815804 - 47,155,203(-) AAGAC(A/C)TGGTG missense, reference
rs815805 -- 47,155,161(+) GGCAG(A/G)CCATC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for C2orf61 Gene

Variant ID Type Subtype PubMed ID
nsv457352 CNV Loss 19166990
nsv2716 CNV Loss 18451855
esv2471188 CNV Insertion 19546169
esv270146 CNV Insertion 20981092
esv272208 CNV Insertion 20981092
nsv498921 CNV Loss 21111241
esv2669653 CNV Deletion 23128226

Relevant External Links for C2orf61 Gene

HapMap Linkage Disequilibrium report
C2orf61

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C2orf61 Gene

Disorders for C2orf61 Gene

Relevant External Links for C2orf61

Genetic Association Database (GAD)
C2orf61
Human Genome Epidemiology (HuGE) Navigator
C2orf61
genes like me logo Genes that share disorders with C2orf61: view

No data available for UniProtKB/Swiss-Prot for C2orf61 Gene

Publications for C2orf61 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3 48
  3. Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project. (PMID: 17903300) Fox C.S. … Atwood L.D. (BMC Med. Genet. 2007) 48
  4. Generation and annotation of the DNA sequences of human chromosomes 2 and 4. (PMID: 15815621) Hillier L.W. … Wilson R.K. (Nature 2005) 4
  5. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for C2orf61 Gene

Sources for C2orf61 Gene

Back to Top

Content