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Aliases for C21orf91 Gene

Aliases for C21orf91 Gene

  • Chromosome 21 Open Reading Frame 91 2 3 5
  • Early Undifferentiated Retina And Lens 2 3
  • Cold Sore Susceptibility Gene 1 2 3
  • C21orf14 3 4
  • C21orf38 3 4
  • EURL 3 4
  • YG81 3 4
  • Chromosome 21 Open Reading Frame 38 2
  • Protein EURL Homolog 3
  • C21orf7 4
  • CSSG1 3

External Ids for C21orf91 Gene

Previous HGNC Symbols for C21orf91 Gene

  • C21orf38
  • C21orf14

Previous GeneCards Identifiers for C21orf91 Gene

  • GC21M015826
  • GC21M018083
  • GC21M018086
  • GC21M019161
  • GC21M004550

Summaries for C21orf91 Gene

GeneCards Summary for C21orf91 Gene

C21orf91 (Chromosome 21 Open Reading Frame 91) is a Protein Coding gene. Diseases associated with C21orf91 include Staphyloenterotoxemia and Listeriosis.

Additional gene information for C21orf91 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C21orf91 Gene

Genomics for C21orf91 Gene

Regulatory Elements for C21orf91 Gene

Enhancers for C21orf91 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH21H017779 1.8 FANTOM5 Ensembl ENCODE dbSUPER 9.2 +35.6 35629 8.7 HDGF FOXA2 TBL1XR1 BMI1 BATF ZNF143 FOS ATF7 ETV6 RUNX3 C21orf91-OT1 C21orf91 BTG3 LOC105372741
GH21H017775 1.5 FANTOM5 Ensembl ENCODE dbSUPER 2.4 +43.6 43625 1.3 ZNF687 FOXA2 RELA POLR2A IKZF1 NBN ETV6 ATF7 RUNX3 IKZF2 C21orf91 LOC105372741 C21orf91-OT1
GH21H017798 0.8 FANTOM5 ENCODE dbSUPER 2.1 +20.1 20065 1.7 C21orf91-OT1 CHODL C21orf91 ENSG00000244676
GH21H017817 1.3 ENCODE dbSUPER 0.7 +0.1 79 4.2 FOXA2 ARNT SIN3A DMAP1 YY1 ZNF143 ZNF207 SP3 MXD4 REST C21orf91-OT1 CHODL C21orf91 ENSG00000244676
GH21H017793 1.3 Ensembl ENCODE dbSUPER 0.3 +24.5 24484 3.7 SOX13 FOXA2 JUN MAX CEBPG BATF RAD21 YY1 LCORL HNF4G C21orf91-OT1 ENSG00000244676 C21orf91
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around C21orf91 on UCSC Golden Path with GeneCards custom track

Promoters for C21orf91 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000140628 286 2601 FOXA2 ARNT SIN3A DMAP1 YY1 ZNF143 ZNF207 SP3 MXD4 REST

Genomic Locations for C21orf91 Gene

Genomic Locations for C21orf91 Gene
chr21:17,788,967-17,819,386
(GRCh38/hg38)
Size:
30,420 bases
Orientation:
Minus strand
chr21:19,161,284-19,191,703
(GRCh37/hg19)

Genomic View for C21orf91 Gene

Genes around C21orf91 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C21orf91 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C21orf91 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C21orf91 Gene

Proteins for C21orf91 Gene

  • Protein details for C21orf91 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9NYK6-EURL_HUMAN
    Recommended name:
    Protein EURL homolog
    Protein Accession:
    Q9NYK6
    Secondary Accessions:
    • B2RB30
    • Q96BK9
    • Q9H8C6

    Protein attributes for C21orf91 Gene

    Size:
    297 amino acids
    Molecular mass:
    33948 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAB14691.1; Type=Erroneous termination; Positions=164; Note=Translated as Gln.; Evidence={ECO:0000305};

    Alternative splice isoforms for C21orf91 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for C21orf91 Gene

Post-translational modifications for C21orf91 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C21orf91 Gene

No data available for DME Specific Peptides for C21orf91 Gene

Domains & Families for C21orf91 Gene

Gene Families for C21orf91 Gene

Human Protein Atlas (HPA):
  • Predicted intracellular proteins

Protein Domains for C21orf91 Gene

InterPro:
Blocks:
ProtoNet:

Suggested Antigen Peptide Sequences for C21orf91 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9NYK6

UniProtKB/Swiss-Prot:

EURL_HUMAN :
  • Belongs to the EURL family.
Family:
  • Belongs to the EURL family.
genes like me logo Genes that share domains with C21orf91: view

Function for C21orf91 Gene

genes like me logo Genes that share phenotypes with C21orf91: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for C21orf91 Gene

Localization for C21orf91 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for C21orf91 gene
Compartment Confidence
cytoskeleton 2
nucleus 2
cytosol 2
extracellular 1

Subcellular locations from the

Human Protein Atlas (HPA)
  • Cytokinetic bridge (2)
  • Microtubules (2)
See all subcellular structures

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for C21orf91 Gene

Pathways & Interactions for C21orf91 Gene

SuperPathways for C21orf91 Gene

No Data Available

Interacting Proteins for C21orf91 Gene

STRING Interaction Network Preview (showing 2 interactants - click image to see details)
http://version10.5.string-db.org/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000284881%0d%0a9606.ENSP00000367049%0d%0a9606.ENSP00000311695%0d%0a
Selected Interacting proteins: ENSP00000284881 Q9NYK6-EURL_HUMAN for C21orf91 Gene via STRING IID

Gene Ontology (GO) - Biological Process for C21orf91 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0021895 cerebral cortex neuron differentiation ISS --
GO:0060999 positive regulation of dendritic spine development ISS --
genes like me logo Genes that share ontologies with C21orf91: view

No data available for Pathways by source and SIGNOR curated interactions for C21orf91 Gene

Drugs & Compounds for C21orf91 Gene

No Compound Related Data Available

Transcripts for C21orf91 Gene

Unigene Clusters for C21orf91 Gene

Chromosome 21 open reading frame 91:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for C21orf91 Gene

ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5 ^ 6a · 6b ^ 7 ^ 8a · 8b · 8c
SP1: - - -
SP2: -
SP3: - -
SP4: - -
SP5: - - -

Relevant External Links for C21orf91 Gene

GeneLoc Exon Structure for
C21orf91
ECgene alternative splicing isoforms for
C21orf91

Expression for C21orf91 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for C21orf91 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for C21orf91 Gene

This gene is overexpressed in Brain - Spinal cord (cervical c-1) (x5.3).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MaxQB, and MOPED for C21orf91 Gene



NURSA nuclear receptor signaling pathways regulating expression of C21orf91 Gene:

C21orf91

SOURCE GeneReport for Unigene cluster for C21orf91 Gene:

Hs.293811
genes like me logo Genes that share expression patterns with C21orf91: view

Primer Products

No data available for Protein differential expression in normal tissues , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for C21orf91 Gene

Orthologs for C21orf91 Gene

This gene was present in the common ancestor of chordates.

Orthologs for C21orf91 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C21orf91 34
  • 100 (a)
OneToOne
C21H21orf91 33
  • 99.78 (n)
dog
(Canis familiaris)
Mammalia C31H21orf91 33
  • 92.48 (n)
C21orf91 34
  • 91 (a)
OneToOne
cow
(Bos Taurus)
Mammalia C1H21orf91 33
  • 91.69 (n)
C1H21ORF91 34
  • 90 (a)
OneToOne
mouse
(Mus musculus)
Mammalia D16Ertd472e 33 16 34
  • 83.97 (n)
rat
(Rattus norvegicus)
Mammalia RGD1563888 33
  • 83.68 (n)
oppossum
(Monodelphis domestica)
Mammalia C21orf91 34
  • 72 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia C21orf91 34
  • 64 (a)
OneToOne
chicken
(Gallus gallus)
Aves C1H21ORF91 33 34
  • 74 (n)
lizard
(Anolis carolinensis)
Reptilia C21orf91 34
  • 67 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia c21orf91 33
  • 66.89 (n)
African clawed frog
(Xenopus laevis)
Amphibia Xl.5392 33
zebrafish
(Danio rerio)
Actinopterygii zgc:110006 33
  • 56.58 (n)
C10H21orf91 34
  • 53 (a)
OneToOne
Species where no ortholog for C21orf91 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for C21orf91 Gene

ENSEMBL:
Gene Tree for C21orf91 (if available)
TreeFam:
Gene Tree for C21orf91 (if available)

Paralogs for C21orf91 Gene

(2) SIMAP similar genes for C21orf91 Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with C21orf91: view

No data available for Paralogs for C21orf91 Gene

Variants for C21orf91 Gene

Sequence variations from dbSNP and Humsavar for C21orf91 Gene

SNP ID Clin Chr 21 pos Sequence Context AA Info Type
rs1000002166 -- 17,799,410(+) ACTGA(C/T)CCCCT intron-variant
rs1000316211 -- 17,811,950(+) CTCTG(C/T)TGCAG intron-variant
rs1000348211 -- 17,792,743(+) AATAC(C/T)GCTTT upstream-variant-2KB, utr-variant-3-prime
rs1000593080 -- 17,806,794(+) AAGAT(C/T)CTGTC intron-variant
rs1000597309 -- 17,800,796(+) ATATC(C/T)ATGTC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for C21orf91 Gene

Variant ID Type Subtype PubMed ID
nsv953347 CNV duplication 24416366
nsv834055 CNV gain 17160897
nsv1059861 CNV loss 25217958
esv3646486 CNV loss 21293372
dgv7768n54 CNV loss 21841781

Variation tolerance for C21orf91 Gene

Residual Variation Intolerance Score: 75.8% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 8.93; 87.19% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for C21orf91 Gene

Human Gene Mutation Database (HGMD)
C21orf91
SNPedia medical, phenotypic, and genealogical associations of SNPs for
C21orf91

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C21orf91 Gene

Disorders for C21orf91 Gene

MalaCards: The human disease database

(2) MalaCards diseases for C21orf91 Gene - From: HGMD and DISEASES

Disorder Aliases PubMed IDs
staphyloenterotoxemia
  • staphylococcal food poisoning
listeriosis
  • infection by listeria monocytogenes
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for C21orf91

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
C21orf91
genes like me logo Genes that share disorders with C21orf91: view

No data available for UniProtKB/Swiss-Prot and Genatlas for C21orf91 Gene

Publications for C21orf91 Gene

  1. The HSA21 gene EURL/C21ORF91 controls neurogenesis within the cerebral cortex and is implicated in the pathogenesis of Down Syndrome. (PMID: 27404227) Li SS … Heng JI (Scientific reports 2016) 2 3 60
  2. C21orf91 genotypes correlate with herpes simplex labialis (cold sore) frequency: description of a cold sore susceptibility gene. (PMID: 22039568) Kriesel JD … Hobbs MR (The Journal of infectious diseases 2011) 2 3 60
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 4 60
  4. Architecture of the human interactome defines protein communities and disease networks. (PMID: 28514442) Huttlin EL … Harper JW (Nature 2017) 3 60
  5. A human interactome in three quantitative dimensions organized by stoichiometries and abundances. (PMID: 26496610) Hein MY … Mann M (Cell 2015) 3 60

Products for C21orf91 Gene

Sources for C21orf91 Gene

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