 |
 | Services
|
 |
 |
Aliases &
Descriptions
for C21orf49 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase, and/or 9Nature:405,311-319 and CroW21)
About This Section
User Feedback | | Aliases & Descriptions |
|---|
| chromosome 21 open reading frame 491 2 | | spliced EST T190199 |
Search outside databases for aliases for C21orf49 genePrevious GC identifers: GC21U990060 GC21P033066 |
Summaries
for C21orf49 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
User Feedback | -- |
Genomic Views
for C21orf49 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl (release 56),
Regulatory elements and Epigenetics data according to
SABiosciences, Whole Chromsome Sequence According to
Nature (Cited Here with Permission):405,311-319 and CroW21)
About This Section
User Feedback |
| GC21P034144: |
GeneLoc |
Nature:405,311-319 |
Start:
|
34,144,411 bp from pter |
19,721,142 bp from centromere |
End:
|
34,266,043 bp from pter |
19,737,649 bp from centromere |
Size:
|
121,633 bases |
16,508 bases |
Orientation:
|
plus strand |
plus strand |
RefSeq DNA sequence:- NC_000021.8 NT_011512.11
Proteins
for C21orf49 gene
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene,
Novus Biologicals, and/or
Sino Biological,
Biochemical Assays by
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 May 2010 and
Entrez Gene,
Antibodies by
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abnova,
OriGene,
Novus Biologicals, and/or
Epitomics)
About This Section
User Feedback | UniProtKB/Swiss-Prot: CU049_HUMAN, Q17RA5 (See
protein sequence)Recommended Name: Putative uncharacterized protein C21orf49 Size: 79 amino acids; 8913 Da
ENSEMBL proteins: ENSP00000410562 ENSP00000417758 ENSP00000371815 ENSP00000408057 ENSP00000371812
Human Recombinant Proteins
Antibodies for C21orf49:
Assays for C21orf49: | Protein
Domains/
Families
for C21orf49 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
User Feedback | ProtoNet protein and cluster: Q17RA5 | Gene Function
for C21orf49 gene
(According to MGI May 08 2010, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Millipore,
Abnova,
siRNAs from
Applied Biosystems,
Sigma-Aldrich, Clones from
Millipore,
Sigma-Aldrich,
OriGene,
Sino Biological,
Ontologies according to Gene Ontology Consortium 01 May 2010 via
Entrez Gene.)
About This Section
User Feedback | | Pathways & Interactions
for C21orf49 gene
(Pathways according to
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
Applied Biosystems GeneAssist,
KEGG
and/or UniProtKB,
(map by GeneGo),
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 May 2010 via
Entrez Gene).
About This Section
User Feedback |  Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for C21orf49
|
Drugs & Compounds
for C21orf49 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
User Feedback |
 Browse Tocris compounds for C21orf49
|
Transcripts
for C21orf49 gene(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 223 Homo sapiens; Apr 2 2010) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
Millipore and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
microRNA from SABiosciences,
Tagged/untagged cDNA clones from
OriGene,
Primers from
OriGene and/or
SABiosciences,
Expression Assays from Applied Biosystems)
About This Section
User Feedback |
| Clones: |  | clones:
|
| Primers: | | Origene genome-wide validated SYBR primer pairs: C21orf49
| | | SABiosciences RT2 qPCR Primer Assay for C21orf49: PPH57901A  |
Additional cDNA sequence: AK096601.1 BC034794.1 BC117397.1 BC117399.1 3 DOTS entries: DT.442944 DT.205334 DT.95302313
 highest scoring ESTs for C21orf49:AA779903 AK096601 AV655412 BX477211 T95301 AA361369 AI214627 AV717800 AW263082 BC034794 Unigene Cluster for C21orf49: Chromosome 21 open reading frame 49 Hs.54725 [show with all ESTs]Unigene Representative Sequence: AK096601
GeneLoc Exon Structure
7 Ensembl transcripts including schematic representations: ENST00000454365
ENST00000477513
ENST00000382378
ENST00000453404
ENST00000382377
ENST00000491756
ENST00000382375
|
Expression
for C21orf49 gene
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 223 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems,
Primers from
OriGene and/or
SABiosciences
)
About This Section
User Feedback | C21orf49 expression in normal and diseased human tissues
 Applied Biosystems TaqMan ® Gene Expression Assays for C21orf49
1 / 2 / 3 5 probe-sets matching C21orf49 gene
Affymetrix
probe-set |
Array |
GeneAnnot data |
GeneNote data |
GeneTide data |
| # genes |
Sensitivity |
Specificity |
Correlation |
Length |
Gb_Accession |
Consensus |
Uniqueness |
Score |
Rank |
| 90342_at2, 3
|
U95-D |
1 |
0.88 |
1.00 |
0.80 |
0.70 |
AA779903 |
0.60 |
1.00 |
0.82 |
1 |
| 76427_i_at2, 3
|
U95-D |
1 |
0.61 |
1.00 |
0.62 |
1.08 |
T95301 |
0.60 |
1.00 |
0.82 |
1 |
| 76429_r_at2, 3
|
U95-D |
1 |
0.56 |
1.00 |
0.51 |
1.26 |
T95301 |
0.60 |
1.00 |
0.82 |
1 |
| 1557782_s_at2
|
U133Plus2 |
1 |
1.00 |
1.00 |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
| 1559755_at2
|
U133Plus2 |
1 |
0.46 |
1.00 |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
About this table
C21orf49 for expression About GeneDecksing
Data from
Genenote
(Publications) and GNF BioGPS
About these images
About these images
CGAP SAGE TAG: --
SOURCE GeneReport for Unigene cluster: Hs.54725
| Primers: | | Origene genome-wide validated SYBR primer pairs: C21orf49 
| | | SABiosciences RT2 qPCR Primer Assay for C21orf49: PPH57901A |
|
Orthologs
for C21orf49 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI May 08 2010,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
User Feedback | ENSEMBL Gene Tree for C21orf49 | Paralogs
for C21orf49 gene(Paralogs according to 1HomoloGene
and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
About This Section
User Feedback | -- |
Genomic Variants
for C21orf49 gene(SNPs according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants,
Genotyping Reagents from
Applied Biosystems)
About This Section
User Feedback | -- |
Disorders & Mutations
for C21orf49 gene
(in which this Gene is Involved, According to
OMIM, UniProtKB,
PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
LSDB, HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
User Feedback | -- |
Medical News
for C21orf49 gene(Possibly Related Articles in
Doctor's Guide)
About This Section
User Feedback | -- |
Publications
for C21orf49 gene (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
User Feedback | 6 PubMed articles for C21orf49 gene: |
Search for C21orf49 gene
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
User Feedback |
|
Genome Databases showing C21orf49 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
User Feedback |
| Other Databases showing C21orf49 gene
(According to HUGE)
About This Section
User Feedback | -- |
Specialized Databases showing C21orf49 gene(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
User Feedback |
| About This Section
User Feedback | Patent Information for C21orf49 gene:
Search GeneIP for patents involving C21orf49
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
| Services
for C21orf49 gene(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Novus Biologicals,
Epitomics, Sigma-Aldrich, R&D Systems, SABiosciences, Millipore, Abnova,
Clones available from OriGene, Sigma-Aldrich, Sino Biological, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience)
About This Section
User Feedback | 
Products for C21orf49:
|
User Feedback
|
|
:
