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Aliases for C20orf62 Gene

Aliases for C20orf62 Gene

  • Chromosome 20 Open Reading Frame 62 2 3
  • Uncharacterized Protein C20orf62 3
  • DJ1013A22.3 3

External Ids for C20orf62 Gene

Previous GeneCards Identifiers for C20orf62 Gene

  • GC20M042809
  • GC20M042769
  • GC20M043719
  • GC20M043766
  • GC20M043775
  • GC20M042514
  • GC20U900177
  • GC20M043080

Summaries for C20orf62 Gene

GeneCards Summary for C20orf62 Gene

C20orf62 (Chromosome 20 Open Reading Frame 62) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C20orf62 Gene

Genomics for C20orf62 Gene

Genomic Location for C20orf62 Gene

Start:
44,451,984 bp from pter
End:
44,465,344 bp from pter
Size:
13,361 bases
Orientation:
Minus strand

Genomic View for C20orf62 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C20orf62 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C20orf62 Gene

No data available for Regulatory Elements for C20orf62 Gene

Proteins for C20orf62 Gene

  • Protein details for C20orf62 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q4KN68-CT062_HUMAN
    Recommended name:
    Uncharacterized protein C20orf62
    Protein Accession:
    Q4KN68
    Secondary Accessions:
    • A2A2S9
    • Q5QPC4

    Protein attributes for C20orf62 Gene

    Size:
    170 amino acids
    Molecular mass:
    19514 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for C20orf62 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for C20orf62 Gene

Proteomics data for C20orf62 Gene at MOPED

Post-translational modifications for C20orf62 Gene

No Post-translational modifications

Other Protein References for C20orf62 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C20orf62 Gene

Domains for C20orf62 Gene

Protein Domains for C20orf62 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C20orf62: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C20orf62 Gene

Function for C20orf62 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C20orf62 Gene

Localization for C20orf62 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C20orf62 Gene COMPARTMENTS Subcellular localization image for C20orf62 gene
Compartment Confidence
cytosol 2
nucleus 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for C20orf62 Gene

Pathways for C20orf62 Gene

SuperPathways for C20orf62 Gene

No Data Available

Interacting Proteins for C20orf62 Gene

Gene Ontology (GO) - Biological Process for C20orf62 Gene

None

No data available for Pathways by source for C20orf62 Gene

Transcripts for C20orf62 Gene

mRNA/cDNA for C20orf62 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for C20orf62 Gene

Chromosome 20 open reading frame 62:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for C20orf62

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for C20orf62 Gene

No ASD Table

Relevant External Links for C20orf62 Gene

GeneLoc Exon Structure for
C20orf62
ECgene alternative splicing isoforms for
C20orf62

Expression for C20orf62 Gene

mRNA expression in normal human tissues for C20orf62 Gene

mRNA differential expression in normal tissues according to GTEx for C20orf62 Gene

This gene is overexpressed in Testis (22.8) and Liver (5.5).

SOURCE GeneReport for Unigene cluster for C20orf62 Gene Hs.357589

genes like me logo Genes that share expressions with C20orf62: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for C20orf62 Gene

Orthologs for C20orf62 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for C20orf62 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C20orf62 36
  • 77 (a)
OneToOne
Species with no ortholog for C20orf62:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C20orf62 Gene

ENSEMBL:
Gene Tree for C20orf62 (if available)
TreeFam:
Gene Tree for C20orf62 (if available)

Paralogs for C20orf62 Gene

No data available for Paralogs for C20orf62 Gene

Variants for C20orf62 Gene

Sequence variations from dbSNP and Humsavar for C20orf62 Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type MAF
rs9975 -- 44,466,636(-) GCCTG(A/G)ACGTA upstream-variant-2KB
rs1143604 -- 44,466,507(-) TATGT(A/G)ACaaa upstream-variant-2KB
rs1143605 -- 44,466,505(-) TGTaa(A/C)aaaaa upstream-variant-2KB
rs1407196 -- 44,465,149(+) AAAAA(A/G)GCTGG intron-variant
rs4324379 -- 44,465,045(+) gatta(G/T)gtact intron-variant

Relevant External Links for C20orf62 Gene

HapMap Linkage Disequilibrium report
C20orf62

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for C20orf62 Gene

Disorders for C20orf62 Gene

No disorders were found for C20orf62 Gene.

No data available for UniProtKB/Swiss-Prot for C20orf62 Gene

Publications for C20orf62 Gene

  1. The DNA sequence and comparative analysis of human chromosome 20. (PMID: 11780052) Deloukas P. … Rogers J. (Nature 2001) 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for C20orf62 Gene

Sources for C20orf62 Gene

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