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Aliases for C20orf202 Gene

Aliases for C20orf202 Gene

  • Chromosome 20 Open Reading Frame 202 2 3

External Ids for C20orf202 Gene

Previous GeneCards Identifiers for C20orf202 Gene

  • GC20P001134
  • GC20P001184
  • GC20P001135

Summaries for C20orf202 Gene

GeneCards Summary for C20orf202 Gene

C20orf202 (Chromosome 20 Open Reading Frame 202) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C20orf202 Gene

Genomics for C20orf202 Gene

Genomic Location for C20orf202 Gene

Start:
1,203,454 bp from pter
End:
1,208,274 bp from pter
Size:
4,821 bases
Orientation:
Plus strand

Genomic View for C20orf202 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C20orf202 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C20orf202 Gene

No data available for Regulatory Elements for C20orf202 Gene

Proteins for C20orf202 Gene

  • Protein details for C20orf202 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A1L168-CT202_HUMAN
    Recommended name:
    Uncharacterized protein C20orf202
    Protein Accession:
    A1L168
    Secondary Accessions:

    Protein attributes for C20orf202 Gene

    Size:
    122 amino acids
    Molecular mass:
    13591 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C20orf202 Gene

Proteomics data for C20orf202 Gene at MOPED

Post-translational modifications for C20orf202 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C20orf202 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C20orf202 Gene

Domains for C20orf202 Gene

Protein Domains for C20orf202 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C20orf202: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C20orf202 Gene

Function for C20orf202 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C20orf202 Gene

Localization for C20orf202 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C20orf202 Gene COMPARTMENTS Subcellular localization image for C20orf202 gene
Compartment Confidence
nucleus 2
cytosol 1
extracellular 1
mitochondrion 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for C20orf202 Gene

Pathways for C20orf202 Gene

SuperPathways for C20orf202 Gene

No Data Available

Interacting Proteins for C20orf202 Gene

Gene Ontology (GO) - Biological Process for C20orf202 Gene

None

No data available for Pathways by source for C20orf202 Gene

Transcripts for C20orf202 Gene

mRNA/cDNA for C20orf202 Gene

(8) Additional mRNA sequences :
(1) REFSEQ mRNAs :
(5) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for C20orf202 Gene

Chromosome 20 open reading frame 202:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C20orf202 Gene

No ASD Table

Relevant External Links for C20orf202 Gene

GeneLoc Exon Structure for
C20orf202
ECgene alternative splicing isoforms for
C20orf202

Expression for C20orf202 Gene

mRNA expression in normal human tissues for C20orf202 Gene

SOURCE GeneReport for Unigene cluster for C20orf202 Gene Hs.148503

genes like me logo Genes that share expressions with C20orf202: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for C20orf202 Gene

Orthologs for C20orf202 Gene

This gene was present in the common ancestor of mammals.

Orthologs for C20orf202 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C20H20orf202 35
  • 99.45 (n)
  • 99.18 (a)
C20orf202 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia C13H20orf202 35
  • 84.18 (n)
  • 81.82 (a)
dog
(Canis familiaris)
Mammalia C24H20orf202 35
  • 84.33 (n)
  • 77.78 (a)
mouse
(Mus musculus)
Mammalia BC052486 16
Tmem74bos 35
  • 76.39 (n)
  • 72.5 (a)
rat
(Rattus norvegicus)
Mammalia Tmem74bos 35
  • 75.63 (n)
  • 67.23 (a)
Species with no ortholog for C20orf202:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C20orf202 Gene

ENSEMBL:
Gene Tree for C20orf202 (if available)
TreeFam:
Gene Tree for C20orf202 (if available)

Paralogs for C20orf202 Gene

No data available for Paralogs for C20orf202 Gene

Variants for C20orf202 Gene

Sequence variations from dbSNP and Humsavar for C20orf202 Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type MAF
rs203554 -- 1,208,690(-) gtgct(G/T)catga downstream-variant-500B
rs203555 -- 1,208,289(-) CTACC(A/G)ATCAT downstream-variant-500B
rs203556 -- 1,207,742(-) AGCCT(A/G)AGTGT utr-variant-3-prime
rs203557 -- 1,205,863(-) gctgg(C/T)ctcag intron-variant
rs203558 -- 1,205,291(-) gtctc(C/T)actaa intron-variant

Structural Variations from Database of Genomic Variants (DGV) for C20orf202 Gene

Variant ID Type Subtype PubMed ID
nsv912585 CNV Gain 21882294

Relevant External Links for C20orf202 Gene

HapMap Linkage Disequilibrium report
C20orf202

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C20orf202 Gene

Disorders for C20orf202 Gene

No disorders were found for C20orf202 Gene.

No data available for UniProtKB/Swiss-Prot for C20orf202 Gene

Publications for C20orf202 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for C20orf202 Gene

Sources for C20orf202 Gene

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