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Aliases for C20orf181 Gene

Aliases for C20orf181 Gene

  • Chromosome 20 Open Reading Frame 181 2 3 5
  • Tissue Plasminogen Activator 3
  • DJ824A14.1 3

External Ids for C20orf181 Gene

Previous GeneCards Identifiers for C20orf181 Gene

  • GC20M062352
  • GC20M062312
  • GC20M063154
  • GC20M063201
  • GC20M061945
  • GC20U900195
  • GC20M062463

Summaries for C20orf181 Gene

GeneCards Summary for C20orf181 Gene

C20orf181 (Chromosome 20 Open Reading Frame 181) is a Genetic Locus.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C20orf181 Gene

Genomics for C20orf181 Gene

Regulatory Elements for C20orf181 Gene

Enhancers for C20orf181 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH20F063893 1.7 FANTOM5 Ensembl ENCODE 11.4 -49.6 -49580 7.8 HDGF PKNOX1 ARNT MLX WRNIP1 ARID4B SIN3A DMAP1 SLC30A9 ZNF766 MIR647 MIR1914 GMEB2 PRPF6 RGS19 RTEL1 OPRL1 ZBTB46 C20orf181 SRMS
GH20F063680 1.3 Ensembl ENCODE 12.2 +155.2 155221 24.9 HDGF PKNOX1 MLX ZFP64 SIN3A ZNF548 FOS PAF1 ZNF263 SP3 LIME1 RTEL1 MIR647 MIR1914 SLC2A4RG ENSG00000229299 ENSG00000237371 ARFRP1 C20orf181 ZBTB46-AS1
GH20F063787 1.1 Ensembl ENCODE 12 +61.9 61912 0.8 HDGF CTCF ATF1 MXI1 ZNF792 SAP130 ARID4B ZSCAN9 ZNF2 RAD21 LIME1 ZBTB46 C20orf181 ENSG00000229299 SLC2A4RG ZGPAT DNAJC5 PIR46452 PIR49937
GH20F063902 1.2 Ensembl ENCODE 10.8 -55.2 -55192 2.2 HDGF HDAC1 ATF1 PKNOX1 TBL1XR1 NFRKB KLF17 ZBTB40 GLIS2 SCRT2 RTEL1 ARFGAP1 FNDC11 SRMS ZBTB46 ZBTB46-AS1 ENSG00000229299 C20orf181 TNFRSF6B OPRL1
GH20F063789 1 ENCODE 12.1 +58.8 58811 1.1 HDGF MLX ARID4B SIN3A SLC30A9 ZNF207 SP5 PPARG ZNF592 KAT8 ZBTB46 C20orf181 ENSG00000229299 SLC2A4RG LIME1 ZGPAT DNAJC5 RGS19 PIR46452 PIR49937
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around C20orf181 on UCSC Golden Path with GeneCards custom track

Genomic Location for C20orf181 Gene

Chromosome:
20
Start:
63,832,609 bp from pter
End:
63,848,312 bp from pter
Size:
15,704 bases
Orientation:
Minus strand

Genomic View for C20orf181 Gene

Genes around C20orf181 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C20orf181 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C20orf181 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C20orf181 Gene

Proteins for C20orf181 Gene

Post-translational modifications for C20orf181 Gene

No Post-translational modifications

No data available for DME Specific Peptides for C20orf181 Gene

Domains & Families for C20orf181 Gene

Suggested Antigen Peptide Sequences for C20orf181 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for C20orf181 Gene

Function for C20orf181 Gene

Phenotypes for C20orf181 Gene

genes like me logo Genes that share phenotypes with C20orf181: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C20orf181 Gene

Localization for C20orf181 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for C20orf181 Gene

Pathways & Interactions for C20orf181 Gene

SuperPathways for C20orf181 Gene

No Data Available

Interacting Proteins for C20orf181 Gene

Gene Ontology (GO) - Biological Process for C20orf181 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for C20orf181 Gene

Transcripts for C20orf181 Gene

mRNA/cDNA for C20orf181 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for C20orf181 Gene

No ASD Table

Relevant External Links for C20orf181 Gene

GeneLoc Exon Structure for
C20orf181
ECgene alternative splicing isoforms for
C20orf181

Expression for C20orf181 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for C20orf181 Gene

NURSA nuclear receptor signaling pathways regulating expression of C20orf181 Gene:

C20orf181

SOURCE GeneReport for Unigene cluster for C20orf181 Gene:

Hs.555583
genes like me logo Genes that share expression patterns with C20orf181: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for C20orf181 Gene

Orthologs for C20orf181 Gene

Evolution for C20orf181 Gene

ENSEMBL:
Gene Tree for C20orf181 (if available)
TreeFam:
Gene Tree for C20orf181 (if available)

No data available for Orthologs for C20orf181 Gene

Paralogs for C20orf181 Gene

(1) SIMAP similar genes for C20orf181 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with C20orf181: view

No data available for Paralogs for C20orf181 Gene

Variants for C20orf181 Gene

Sequence variations from dbSNP and Humsavar for C20orf181 Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type
rs111433478 -- 63,847,123(+) ACACA(C/G)ACACA intron-variant
rs111728242 -- 63,844,065(+) GCCGA(-/G)GGCCG intron-variant
rs111823572 -- 63,847,207(+) AGAGA(C/G)ACACA intron-variant
rs111874365 -- 63,847,164(+) GACAC(A/G)CACAC intron-variant
rs112318900 -- 63,847,985(+) TCCAG(C/T)GAGAG intron-variant

Relevant External Links for C20orf181 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
C20orf181

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for C20orf181 Gene

Disorders for C20orf181 Gene

Relevant External Links for C20orf181

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
C20orf181

No disorders were found for C20orf181 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C20orf181 Gene

Publications for C20orf181 Gene

No publications were found for C20orf181 Gene.

Products for C20orf181 Gene

Sources for C20orf181 Gene

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