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Aliases for C20orf144 Gene

Aliases for C20orf144 Gene

  • Chromosome 20 Open Reading Frame 144 2 3
  • Bcl-2-Like Protein From Testis 2 3 4
  • Bclt 3 4
  • Uncharacterized Protein C20orf144 3
  • DJ63M2.6 3

External Ids for C20orf144 Gene

Previous GeneCards Identifiers for C20orf144 Gene

  • GC20P032008
  • GC20P032918
  • GC20P032965
  • GC20P031713
  • GC20P032250
  • GC20P029036

Summaries for C20orf144 Gene

GeneCards Summary for C20orf144 Gene

C20orf144 (Chromosome 20 Open Reading Frame 144) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C20orf144 Gene

Genomics for C20orf144 Gene

Regulatory Elements for C20orf144 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for C20orf144 Gene

Start:
33,662,284 bp from pter
End:
33,665,619 bp from pter
Size:
3,336 bases
Orientation:
Plus strand

Genomic View for C20orf144 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C20orf144 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C20orf144 Gene

Proteins for C20orf144 Gene

  • Protein details for C20orf144 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9BQM9-CT144_HUMAN
    Recommended name:
    Uncharacterized protein C20orf144
    Protein Accession:
    Q9BQM9
    Secondary Accessions:
    • Q1AHR2

    Protein attributes for C20orf144 Gene

    Size:
    153 amino acids
    Molecular mass:
    17214 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C20orf144 Gene

Proteomics data for C20orf144 Gene at MOPED

Post-translational modifications for C20orf144 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C20orf144 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C20orf144 Gene

Domains for C20orf144 Gene

Protein Domains for C20orf144 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for C20orf144 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C20orf144: view

No data available for Gene Families and UniProtKB/Swiss-Prot for C20orf144 Gene

Function for C20orf144 Gene

Phenotypes for C20orf144 Gene

genes like me logo Genes that share phenotypes with C20orf144: view

Animal Model Products

CRISPR Products

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate C20orf144
    • Block miRNA regulation of C20orf144 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for C20orf144

    In Situ Assay Products

    Flow Cytometry Products

    No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C20orf144 Gene

    Localization for C20orf144 Gene

    Subcellular locations from

    COMPARTMENTS
    Jensen Localization Image for C20orf144 Gene COMPARTMENTS Subcellular localization image for C20orf144 gene
    Compartment Confidence
    nucleus 3
    mitochondrion 2
    cytosol 1

    No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for C20orf144 Gene

    Pathways for C20orf144 Gene

    SuperPathways for C20orf144 Gene

    No Data Available

    Interacting Proteins for C20orf144 Gene

    Gene Ontology (GO) - Biological Process for C20orf144 Gene

    None

    No data available for Pathways by source for C20orf144 Gene

    Transcripts for C20orf144 Gene

    mRNA/cDNA for C20orf144 Gene

    (31) Selected AceView cDNA sequences:
    (2) Additional mRNA sequences :
    (1) REFSEQ mRNAs :
    (2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

    Unigene Clusters for C20orf144 Gene

    Chromosome 20 open reading frame 144:
    Representative Sequences:

    CRISPR Products

    miRNA Products

    • QIAGEN qRT-PCR Assays for microRNAs that regulate C20orf144
      • Block miRNA regulation of C20orf144 using miScript Target Protectors

      Inhibitory RNA Products

      • Predesigned siRNA for gene silencing in human,mouse,rat for C20orf144

      Primer Products

      • QuantiTect SYBR Green Assays in human,mouse,rat
      • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
      • QuantiFast Probe-based Assays in human,mouse,rat

      Flow Cytometry Products

      Alternative Splicing Database (ASD) splice patterns (SP) for C20orf144 Gene

      No ASD Table

      Relevant External Links for C20orf144 Gene

      GeneLoc Exon Structure for
      C20orf144
      ECgene alternative splicing isoforms for
      C20orf144

      Expression for C20orf144 Gene

      mRNA expression in normal human tissues for C20orf144 Gene

      Protein differential expression in normal tissues for C20orf144 Gene

      This gene is overexpressed in Plasma (41.7), Testis (15.8), and Ovary (11.5).

      Integrated Proteomics: protein expression from ProteomicsDB and MOPED for C20orf144 Gene

      SOURCE GeneReport for Unigene cluster for C20orf144 Gene Hs.324104

      mRNA Expression by UniProt/SwissProt for C20orf144 Gene

      Q9BQM9-CT144_HUMAN
      Tissue specificity: Preferentially expressed in the testis.
      genes like me logo Genes that share expressions with C20orf144: view

      Expression partners for C20orf144 Gene

      In Situ Assay Products

      No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA differential expression in normal tissues for C20orf144 Gene

      Orthologs for C20orf144 Gene

      This gene was present in the common ancestor of mammals.

      Orthologs for C20orf144 Gene

      Organism Taxonomy Gene Similarity Type Details
      chimpanzee
      (Pan troglodytes)
      Mammalia C20H20orf144 35
      • 97.33 (n)
      • 96 (a)
      C20H20orf144 36
      • 94 (a)
      OneToOne
      mouse
      (Mus musculus)
      Mammalia 1700003F12Rik 16
      1700003F12Rik 36
      • 43 (a)
      OneToOne
      cow
      (Bos Taurus)
      Mammalia C20orf144 36
      • 45 (a)
      OneToOne
      oppossum
      (Monodelphis domestica)
      Mammalia C20orf144 36
      • 33 (a)
      OneToOne
      Species with no ortholog for C20orf144:
      • A. gosspyii yeast (Ashbya gossypii)
      • Actinobacteria (Mycobacterium tuberculosis)
      • African clawed frog (Xenopus laevis)
      • African malaria mosquito (Anopheles gambiae)
      • Alicante grape (Vitis vinifera)
      • alpha proteobacteria (Wolbachia pipientis)
      • amoeba (Dictyostelium discoideum)
      • Archea (Pyrococcus horikoshii)
      • baker's yeast (Saccharomyces cerevisiae)
      • barley (Hordeum vulgare)
      • beta proteobacteria (Neisseria meningitidis)
      • bread mold (Neurospora crassa)
      • chicken (Gallus gallus)
      • Chromalveolata (Phytophthora infestans)
      • common water flea (Daphnia pulex)
      • corn (Zea mays)
      • dog (Canis familiaris)
      • E. coli (Escherichia coli)
      • filamentous fungi (Aspergillus nidulans)
      • Firmicute bacteria (Streptococcus pneumoniae)
      • fission yeast (Schizosaccharomyces pombe)
      • fruit fly (Drosophila melanogaster)
      • green algae (Chlamydomonas reinhardtii)
      • honey bee (Apis mellifera)
      • K. lactis yeast (Kluyveromyces lactis)
      • lizard (Anolis carolinensis)
      • loblloly pine (Pinus taeda)
      • malaria parasite (Plasmodium falciparum)
      • medicago trunc (Medicago Truncatula)
      • moss (Physcomitrella patens)
      • orangutan (Pongo pygmaeus)
      • pig (Sus scrofa)
      • platypus (Ornithorhynchus anatinus)
      • rainbow trout (Oncorhynchus mykiss)
      • rat (Rattus norvegicus)
      • rice (Oryza sativa)
      • rice blast fungus (Magnaporthe grisea)
      • schistosome parasite (Schistosoma mansoni)
      • sea anemone (Nematostella vectensis)
      • sea squirt (Ciona intestinalis)
      • sea squirt (Ciona savignyi)
      • sea urchin (Strongylocentrotus purpuratus)
      • sorghum (Sorghum bicolor)
      • soybean (Glycine max)
      • stem rust fungus (Puccinia graminis)
      • sugarcane (Saccharum officinarum)
      • thale cress (Arabidopsis thaliana)
      • tomato (Lycopersicon esculentum)
      • toxoplasmosis (Toxoplasma gondii)
      • Trichoplax (Trichoplax adhaerens)
      • tropical clawed frog (Silurana tropicalis)
      • wheat (Triticum aestivum)
      • worm (Caenorhabditis elegans)
      • zebrafish (Danio rerio)

      Evolution for C20orf144 Gene

      ENSEMBL:
      Gene Tree for C20orf144 (if available)
      TreeFam:
      Gene Tree for C20orf144 (if available)

      Paralogs for C20orf144 Gene

      No data available for Paralogs for C20orf144 Gene

      Variants for C20orf144 Gene

      Sequence variations from dbSNP and Humsavar for C20orf144 Gene

      SNP ID Clin Chr 20 pos Sequence Context AA Info Type MAF
      VAR_050921 -

      Structural Variations from Database of Genomic Variants (DGV) for C20orf144 Gene

      Variant ID Type Subtype PubMed ID
      nsv833960 CNV Loss 17160897
      nsv833961 CNV Loss 17160897
      dgv4564n71 CNV Loss 21882294
      dgv4565n71 CNV Loss 21882294

      Relevant External Links for C20orf144 Gene

      HapMap Linkage Disequilibrium report
      C20orf144

      No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C20orf144 Gene

      Disorders for C20orf144 Gene

      No disorders were found for C20orf144 Gene.

      No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for C20orf144 Gene

      Publications for C20orf144 Gene

      1. The DNA sequence and comparative analysis of human chromosome 20. (PMID: 11780052) Deloukas P. … Rogers J. (Nature 2001) 2 3 4
      2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
      3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

      Products for C20orf144 Gene

      • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
      • QIAGEN qRT-PCR Assays for microRNAs that regulate C20orf144
        • QuantiTect SYBR Green Assays in human,mouse,rat
        • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
        • QuantiFast Probe-based Assays in human,mouse,rat
        • Predesigned siRNA for gene silencing in human,mouse,rat for C20orf144
        • Block miRNA regulation of C20orf144 using miScript Target Protectors

        Sources for C20orf144 Gene

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