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Aliases for C1orf94 Gene

Aliases for C1orf94 Gene

  • Chromosome 1 Open Reading Frame 94 2 3

External Ids for C1orf94 Gene

Summaries for C1orf94 Gene

GeneCards Summary for C1orf94 Gene

C1orf94 (Chromosome 1 Open Reading Frame 94) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C1orf94 Gene

Genomics for C1orf94 Gene

Genomic Location for C1orf94 Gene

Start:
34,166,883 bp from pter
End:
34,219,131 bp from pter
Size:
52,249 bases
Orientation:
Plus strand

Genomic View for C1orf94 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C1orf94 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C1orf94 Gene

No data available for Regulatory Elements for C1orf94 Gene

Proteins for C1orf94 Gene

  • Protein details for C1orf94 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6P1W5-CA094_HUMAN
    Recommended name:
    Uncharacterized protein C1orf94
    Protein Accession:
    Q6P1W5
    Secondary Accessions:
    • B3KVT1
    • D3DPR3
    • E9PJ76
    • Q96IC8

    Protein attributes for C1orf94 Gene

    Size:
    598 amino acids
    Molecular mass:
    65353 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for C1orf94 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for C1orf94 Gene

Proteomics data for C1orf94 Gene at MOPED

Post-translational modifications for C1orf94 Gene

No Post-translational modifications

Other Protein References for C1orf94 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C1orf94 Gene

Domains for C1orf94 Gene

Protein Domains for C1orf94 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C1orf94: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C1orf94 Gene

Function for C1orf94 Gene

Gene Ontology (GO) - Molecular Function for C1orf94 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 16189514
genes like me logo Genes that share ontologies with C1orf94: view

Phenotypes for C1orf94 Gene

genes like me logo Genes that share phenotypes with C1orf94: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C1orf94 Gene

Localization for C1orf94 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C1orf94 Gene COMPARTMENTS Subcellular localization image for C1orf94 gene
Compartment Confidence
cytosol 1
endoplasmic reticulum 1
mitochondrion 1
nucleus 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for C1orf94 Gene

Pathways for C1orf94 Gene

SuperPathways for C1orf94 Gene

No Data Available

Gene Ontology (GO) - Biological Process for C1orf94 Gene

None

No data available for Pathways by source for C1orf94 Gene

Transcripts for C1orf94 Gene

mRNA/cDNA for C1orf94 Gene

(2) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(21) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for C1orf94 Gene

Chromosome 1 open reading frame 94:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C1orf94 Gene

No ASD Table

Relevant External Links for C1orf94 Gene

GeneLoc Exon Structure for
C1orf94
ECgene alternative splicing isoforms for
C1orf94

Expression for C1orf94 Gene

mRNA expression in normal human tissues for C1orf94 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for C1orf94 Gene

This gene is overexpressed in Testis (39.4).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for C1orf94 Gene

SOURCE GeneReport for Unigene cluster for C1orf94 Gene Hs.194610

genes like me logo Genes that share expressions with C1orf94: view

No data available for mRNA Expression by UniProt/SwissProt for C1orf94 Gene

Orthologs for C1orf94 Gene

This gene was present in the common ancestor of chordates.

Orthologs for C1orf94 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C1H1orf94 35
  • 97.28 (n)
  • 95.83 (a)
C1orf94 36
  • 98 (a)
OneToOne
cow
(Bos Taurus)
Mammalia C1orf94 36
  • 76 (a)
OneToOne
C3H1orf94 35
  • 83.33 (n)
  • 77.42 (a)
dog
(Canis familiaris)
Mammalia C15H1orf94 35
  • 79.59 (n)
  • 71.65 (a)
C1orf94 36
  • 64 (a)
OneToOne
mouse
(Mus musculus)
Mammalia CK137956 35
  • 80.33 (n)
  • 73.02 (a)
CK137956 16
CK137956 36
  • 73 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia C1orf94 36
  • 63 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia C1orf94 36
  • 45 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia LOC682102 35
  • 80.12 (n)
  • 73.65 (a)
chicken
(Gallus gallus)
Aves C1ORF94 35
  • 58.62 (n)
  • 45.14 (a)
C1orf94 36
  • 47 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia C1orf94 36
  • 39 (a)
OneToOne
Species with no ortholog for C1orf94:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C1orf94 Gene

ENSEMBL:
Gene Tree for C1orf94 (if available)
TreeFam:
Gene Tree for C1orf94 (if available)

Paralogs for C1orf94 Gene

No data available for Paralogs for C1orf94 Gene

Variants for C1orf94 Gene

Sequence variations from dbSNP and Humsavar for C1orf94 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs182434 -- 34,175,195(-) AAAAA(A/T)AAAAT upstream-variant-2KB, intron-variant
rs184171 -- 34,171,505(-) AAACA(G/T)TACTG intron-variant
rs297780 -- 34,183,528(+) gggtg(A/G)catga intron-variant
rs297781 -- 34,185,479(+) ccagc(A/C)TTTCC intron-variant
rs297782 -- 34,176,608(+) AGATT(C/G)GCTTT upstream-variant-2KB, intron-variant

Structural Variations from Database of Genomic Variants (DGV) for C1orf94 Gene

Variant ID Type Subtype PubMed ID
nsv470709 CNV Gain 18288195
nsv834646 CNV Gain 17160897
nsv834657 CNV Gain 17160897
esv270278 CNV Insertion 20981092
nsv834669 CNV Gain 17160897

Relevant External Links for C1orf94 Gene

HapMap Linkage Disequilibrium report
C1orf94

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C1orf94 Gene

Disorders for C1orf94 Gene

Relevant External Links for C1orf94

Genetic Association Database (GAD)
C1orf94
genes like me logo Genes that share disorders with C1orf94: view

No data available for UniProtKB/Swiss-Prot for C1orf94 Gene

Publications for C1orf94 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. Open reading frames associated with cancer in the dark matter of the human genome. (PMID: 25048349) Delgado A.P. … Narayanan R. (Cancer Genomics Proteomics 2014) 2 3
  3. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3
  4. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S. … Cupples L.A. (BMC Med. Genet. 2007) 48
  5. Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project. (PMID: 17903300) Fox C.S. … Atwood L.D. (BMC Med. Genet. 2007) 48

Products for C1orf94 Gene

Sources for C1orf94 Gene

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