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Aliases for C1orf35 Gene

Aliases for C1orf35 Gene

  • Chromosome 1 Open Reading Frame 35 2 3
  • Multiple Myeloma Tumor-Associated Protein 2 2 3
  • Multiple Myeloma Transforming 2 3
  • HMMTAG2 4
  • MMTAG2 3

External Ids for C1orf35 Gene

Summaries for C1orf35 Gene

GeneCards Summary for C1orf35 Gene

C1orf35 (Chromosome 1 Open Reading Frame 35) is a Protein Coding gene. Diseases associated with C1orf35 include multiple myeloma and myeloma.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C1orf35 Gene

Genomics for C1orf35 Gene

Genomic Location for C1orf35 Gene

Start:
228,100,726 bp from pter
End:
228,105,411 bp from pter
Size:
4,686 bases
Orientation:
Minus strand

Genomic View for C1orf35 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C1orf35 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C1orf35 Gene

Regulatory Elements for C1orf35 Gene

Proteins for C1orf35 Gene

  • Protein details for C1orf35 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9BU76-MMTA2_HUMAN
    Recommended name:
    Multiple myeloma tumor-associated protein 2
    Protein Accession:
    Q9BU76
    Secondary Accessions:
    • Q6P5Y0
    • Q6ZTZ6
    • Q6ZWA6
    • Q8IZH3

    Protein attributes for C1orf35 Gene

    Size:
    263 amino acids
    Molecular mass:
    29412 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for C1orf35 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for C1orf35 Gene

Proteomics data for C1orf35 Gene at MOPED

Post-translational modifications for C1orf35 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C1orf35 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C1orf35 Gene

Domains for C1orf35 Gene

Protein Domains for C1orf35 Gene

genes like me logo Genes that share domains with C1orf35: view

No data available for Gene Families and UniProtKB/Swiss-Prot for C1orf35 Gene

Function for C1orf35 Gene

Gene Ontology (GO) - Molecular Function for C1orf35 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 16189514
GO:0044822 poly(A) RNA binding IDA 22658674
genes like me logo Genes that share ontologies with C1orf35: view

miRNA for C1orf35 Gene

miRTarBase miRNAs that target C1orf35

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for C1orf35 Gene

Localization for C1orf35 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C1orf35 Gene COMPARTMENTS Subcellular localization image for C1orf35 gene
Compartment Confidence
nucleus 3
cytosol 1
plasma membrane 1

No data available for Gene Ontology (GO) - Cellular Components for C1orf35 Gene

Pathways for C1orf35 Gene

SuperPathways for C1orf35 Gene

No Data Available

Gene Ontology (GO) - Biological Process for C1orf35 Gene

None

No data available for Pathways by source for C1orf35 Gene

Transcripts for C1orf35 Gene

Unigene Clusters for C1orf35 Gene

Chromosome 1 open reading frame 35:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C1orf35 Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5 ^ 6a · 6b ^ 7 ^ 8 ^ 9 ^ 10
SP1: -
SP2:
SP3: - -
SP4: -
SP5:
SP6:

Relevant External Links for C1orf35 Gene

GeneLoc Exon Structure for
C1orf35
ECgene alternative splicing isoforms for
C1orf35

Expression for C1orf35 Gene

mRNA expression in normal human tissues for C1orf35 Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for C1orf35 Gene

SOURCE GeneReport for Unigene cluster for C1orf35 Gene Hs.445952

genes like me logo Genes that share expressions with C1orf35: view

Orthologs for C1orf35 Gene

This gene was present in the common ancestor of chordates.

Orthologs for C1orf35 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C1H1orf35 36
  • 95.7 (n)
  • 94.9 (a)
C1orf35 37
  • 97 (a)
OneToOne
cow
(Bos Taurus)
Mammalia C7H1orf35 36
  • 78.21 (n)
  • 79.22 (a)
MMTAG2 37
  • 77 (a)
OneToOne
dog
(Canis familiaris)
Mammalia C14H1orf35 36
  • 74.74 (n)
  • 70.93 (a)
C1orf35 37
  • 70 (a)
OneToOne
mouse
(Mus musculus)
Mammalia 2310033P09Rik 36
  • 81.14 (n)
  • 81.01 (a)
2310033P09Rik 16
2310033P09Rik 37
  • 78 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia RGD1304587 36
  • 80.62 (n)
  • 80.62 (a)
chicken
(Gallus gallus)
Aves C1orf35 37
  • 48 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia C1orf35 37
  • 61 (a)
OneToOne
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.843 36
zebrafish
(Danio rerio)
Actinopterygii C2H1orf35 37
  • 42 (a)
OneToOne
zgc63882 36
Species with no ortholog for C1orf35:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for C1orf35 Gene

ENSEMBL:
Gene Tree for C1orf35 (if available)
TreeFam:
Gene Tree for C1orf35 (if available)

Paralogs for C1orf35 Gene

No data available for Paralogs for C1orf35 Gene

Variants for C1orf35 Gene

Sequence variations from dbSNP and Humsavar for C1orf35 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs822739 -- 228,100,517(-) TGAGT(A/T)GCTGG downstream-variant-500B
rs1128456 -- 228,102,142(-) GGCGG(A/G)CCCGG synonymous-codon, reference, nc-transcript-variant
rs1745419 -- 228,103,769(-) caggc(A/G/T)ggagt upstream-variant-2KB
rs2273939 -- 228,101,407(-) AAAGA(A/G)AAGAA synonymous-codon, reference, nc-transcript-variant
rs2295995 -- 228,102,275(-) GGGGC(C/T)AACAG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for C1orf35 Gene

Variant ID Type Subtype PubMed ID
esv32853 CNV Gain 17666407
nsv826908 CNV Gain 20364138
nsv516409 CNV Loss 19592680
nsv523935 CNV Loss 19592680
nsv832803 CNV Loss 17160897
nsv873252 CNV Loss 21882294
dgv537n71 CNV Loss 21882294
nsv873255 CNV Loss 21882294

Relevant External Links for C1orf35 Gene

HapMap Linkage Disequilibrium report
C1orf35

Disorders for C1orf35 Gene

(2) MalaCards Diseases for C1orf35 Gene

Search for C1orf35 Gene in MalaCards »
genes like me logo Genes that share disorders with C1orf35: view

No data available for UniProtKB/Swiss-Prot for C1orf35 Gene

Publications for C1orf35 Gene

  1. Cloning and sequence analysis of tumor-associated gene hMMTAG2 from human multiple myeloma cell line ARH-77. (PMID: 12545221) Tian J.Y. … Jiang Y.S. (Sheng Wu Hua Xue Yu Sheng Wu Wu Li Xue Bao 2003) 2 3 4
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory S.G. … Bentley D.R. (Nature 2006) 3 4
  5. An empirical framework for binary interactome mapping. (PMID: 19060904) Venkatesan K. … Vidal M. (Nat. Methods 2009) 3

Products for C1orf35 Gene

Sources for C1orf35 Gene

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