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Aliases for C1orf229 Gene

Aliases for C1orf229 Gene

  • Chromosome 1 Open Reading Frame 229 2 3

External Ids for C1orf229 Gene

Previous GeneCards Identifiers for C1orf229 Gene

  • GC01M245341
  • GC01M247273
  • GC01M217667

Summaries for C1orf229 Gene

GeneCards Summary for C1orf229 Gene

C1orf229 (Chromosome 1 Open Reading Frame 229) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C1orf229 Gene

Genomics for C1orf229 Gene

Regulatory Elements for C1orf229 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for C1orf229 Gene

Start:
247,110,160 bp from pter
End:
247,112,417 bp from pter
Size:
2,258 bases
Orientation:
Minus strand

Genomic View for C1orf229 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C1orf229 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C1orf229 Gene

Proteins for C1orf229 Gene

  • Protein details for C1orf229 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6ZS94-CA229_HUMAN
    Recommended name:
    Putative uncharacterized protein C1orf229
    Protein Accession:
    Q6ZS94
    Secondary Accessions:

    Protein attributes for C1orf229 Gene

    Size:
    237 amino acids
    Molecular mass:
    24356 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C1orf229 Gene

Proteomics data for C1orf229 Gene at MOPED

Post-translational modifications for C1orf229 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C1orf229 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C1orf229 Gene

Domains for C1orf229 Gene

Protein Domains for C1orf229 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C1orf229: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C1orf229 Gene

Function for C1orf229 Gene

Phenotypes for C1orf229 Gene

genes like me logo Genes that share phenotypes with C1orf229: view

Animal Model Products

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for C1orf229

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C1orf229 Gene

Localization for C1orf229 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C1orf229 Gene COMPARTMENTS Subcellular localization image for C1orf229 gene
Compartment Confidence
mitochondrion 2
nucleus 2
cytosol 1
peroxisome 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for C1orf229 Gene

Pathways for C1orf229 Gene

SuperPathways for C1orf229 Gene

No Data Available

Interacting Proteins for C1orf229 Gene

Gene Ontology (GO) - Biological Process for C1orf229 Gene

None

No data available for Pathways by source for C1orf229 Gene

Transcripts for C1orf229 Gene

mRNA/cDNA for C1orf229 Gene

(2) Selected AceView cDNA sequences:
(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for C1orf229 Gene

Chromosome 1 open reading frame 229:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for C1orf229

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for C1orf229
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for C1orf229 Gene

No ASD Table

Relevant External Links for C1orf229 Gene

GeneLoc Exon Structure for
C1orf229
ECgene alternative splicing isoforms for
C1orf229

Expression for C1orf229 Gene

mRNA expression in normal human tissues for C1orf229 Gene

SOURCE GeneReport for Unigene cluster for C1orf229 Gene Hs.456511

genes like me logo Genes that share expressions with C1orf229: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for C1orf229 Gene

Orthologs for C1orf229 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for C1orf229 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C1H1orf229 35
  • 97.75 (n)
  • 94.94 (a)
C1orf229 36
  • 95 (a)
OneToOne
Species with no ortholog for C1orf229:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C1orf229 Gene

ENSEMBL:
Gene Tree for C1orf229 (if available)
TreeFam:
Gene Tree for C1orf229 (if available)

Paralogs for C1orf229 Gene

No data available for Paralogs for C1orf229 Gene

Variants for C1orf229 Gene

Sequence variations from dbSNP and Humsavar for C1orf229 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs4925700 -- 247,113,729(+) ccctc(A/G)gctct upstream-variant-2KB
rs6426220 -- 247,113,092(+) CTGTA(A/G)CAACC upstream-variant-2KB
rs6662592 -- 247,110,425(+) taaaa(A/T)tacaa utr-variant-3-prime
rs6662594 -- 247,110,435(+) aaaaa(C/T)tagcc utr-variant-3-prime
rs7513134 -- 247,113,221(+) ATCTC(C/T)GCCCT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for C1orf229 Gene

Variant ID Type Subtype PubMed ID
nsv873424 CNV Gain 21882294
esv33129 CNV Gain+Loss 17666407
nsv873428 CNV Loss 21882294
dgv562n71 CNV Loss 21882294
nsv509779 CNV Insertion 20534489
esv27005 CNV Loss 19812545
nsv833126 CNV Loss 17160897
nsv5287 CNV Insertion 18451855

Relevant External Links for C1orf229 Gene

HapMap Linkage Disequilibrium report
C1orf229

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C1orf229 Gene

Disorders for C1orf229 Gene

Relevant External Links for C1orf229

Genetic Association Database (GAD)
C1orf229
genes like me logo Genes that share disorders with C1orf229: view

No data available for UniProtKB/Swiss-Prot for C1orf229 Gene

Publications for C1orf229 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 4

Products for C1orf229 Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate C1orf229
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for C1orf229
    • Block miRNA regulation of C1orf229 using miScript Target Protectors

    Sources for C1orf229 Gene

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