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Aliases for C1orf229 Gene

Aliases for C1orf229 Gene

  • Chromosome 1 Open Reading Frame 229 2 3 5

External Ids for C1orf229 Gene

Previous GeneCards Identifiers for C1orf229 Gene

  • GC01M245341
  • GC01M247273
  • GC01M217667

Summaries for C1orf229 Gene

GeneCards Summary for C1orf229 Gene

C1orf229 (Chromosome 1 Open Reading Frame 229) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C1orf229 Gene

Genomics for C1orf229 Gene

Regulatory Elements for C1orf229 Gene

Enhancers for C1orf229 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
- Elite enhancer/Elite enhancer-gene association

Enhancers around C1orf229 on UCSC Golden Path with GeneCards custom track

Promoters for C1orf229 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around C1orf229 on UCSC Golden Path with GeneCards custom track

Genomic Location for C1orf229 Gene

Chromosome:
1
Start:
247,110,160 bp from pter
End:
247,112,417 bp from pter
Size:
2,258 bases
Orientation:
Minus strand

Genomic View for C1orf229 Gene

Genes around C1orf229 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C1orf229 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C1orf229 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C1orf229 Gene

Proteins for C1orf229 Gene

  • Protein details for C1orf229 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6ZS94-CA229_HUMAN
    Recommended name:
    Putative uncharacterized protein C1orf229
    Protein Accession:
    Q6ZS94

    Protein attributes for C1orf229 Gene

    Size:
    237 amino acids
    Molecular mass:
    24356 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C1orf229 Gene

Post-translational modifications for C1orf229 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C1orf229 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for C1orf229 Gene

Domains & Families for C1orf229 Gene

Protein Domains for C1orf229 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C1orf229: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C1orf229 Gene

Function for C1orf229 Gene

genes like me logo Genes that share phenotypes with C1orf229: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for C1orf229 Gene

Localization for C1orf229 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C1orf229 Gene COMPARTMENTS Subcellular localization image for C1orf229 gene
Compartment Confidence
mitochondrion 2
nucleus 2
cytosol 1
peroxisome 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for C1orf229 Gene

Pathways & Interactions for C1orf229 Gene

SuperPathways for C1orf229 Gene

No Data Available

Interacting Proteins for C1orf229 Gene

Gene Ontology (GO) - Biological Process for C1orf229 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for C1orf229 Gene

Drugs & Compounds for C1orf229 Gene

No Compound Related Data Available

Transcripts for C1orf229 Gene

mRNA/cDNA for C1orf229 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for C1orf229 Gene

Chromosome 1 open reading frame 229:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for C1orf229 Gene

No ASD Table

Relevant External Links for C1orf229 Gene

GeneLoc Exon Structure for
C1orf229
ECgene alternative splicing isoforms for
C1orf229

Expression for C1orf229 Gene

mRNA expression in normal human tissues for C1orf229 Gene

NURSA nuclear receptor signaling pathways regulating expression of C1orf229 Gene:

C1orf229

SOURCE GeneReport for Unigene cluster for C1orf229 Gene:

Hs.456511
genes like me logo Genes that share expression patterns with C1orf229: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for C1orf229 Gene

Orthologs for C1orf229 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for C1orf229 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C1H1orf229 34
  • 97.75 (n)
  • 94.94 (a)
C1orf229 35
  • 95 (a)
OneToOne
Species where no ortholog for C1orf229 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C1orf229 Gene

ENSEMBL:
Gene Tree for C1orf229 (if available)
TreeFam:
Gene Tree for C1orf229 (if available)

Paralogs for C1orf229 Gene

No data available for Paralogs for C1orf229 Gene

Variants for C1orf229 Gene

Sequence variations from dbSNP and Humsavar for C1orf229 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs6426220 -- 247,113,092(+) CTGTA(A/G)CAACC upstream-variant-2KB
rs4925700 -- 247,113,729(+) ccctc(A/G)gctct upstream-variant-2KB
rs6662592 -- 247,110,425(+) taaaa(A/T)tacaa utr-variant-3-prime
rs6662594 -- 247,110,435(+) aaaaa(C/T)tagcc utr-variant-3-prime
rs6662688 -- 247,110,456(+) gcggg(C/T)gcctg utr-variant-3-prime

Structural Variations from Database of Genomic Variants (DGV) for C1orf229 Gene

Variant ID Type Subtype PubMed ID
esv27005 CNV loss 19812545
esv33129 CNV gain+loss 17666407
esv3589499 CNV loss 21293372
esv3589507 CNV loss 21293372
esv3891392 CNV loss 25118596
nsv1014012 CNV loss 25217958
nsv509779 CNV insertion 20534489
nsv5287 CNV insertion 18451855
nsv549547 CNV loss 21841781
nsv549548 CNV loss 21841781
nsv549549 CNV loss 21841781
nsv833126 CNV loss 17160897
nsv954060 CNV deletion 24416366
nsv999879 CNV gain 25217958

Variation tolerance for C1orf229 Gene

Gene Damage Index Score: 5.99; 74.80% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for C1orf229 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
C1orf229

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C1orf229 Gene

Disorders for C1orf229 Gene

Relevant External Links for C1orf229

Genetic Association Database (GAD)
C1orf229
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
C1orf229

No disorders were found for C1orf229 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C1orf229 Gene

Publications for C1orf229 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 4 65

Products for C1orf229 Gene

Sources for C1orf229 Gene

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