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Aliases for C1orf220 Gene

Aliases for C1orf220 Gene

  • Chromosome 1 Open Reading Frame 220 2 3

External Ids for C1orf220 Gene

Previous GeneCards Identifiers for C1orf220 Gene

  • GC01P176780
  • GC01P178511
  • GC01P149739

Summaries for C1orf220 Gene

GeneCards Summary for C1orf220 Gene

C1orf220 (Chromosome 1 Open Reading Frame 220) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C1orf220 Gene

Genomics for C1orf220 Gene

Regulatory Elements for C1orf220 Gene

Genomic Location for C1orf220 Gene

178,542,752 bp from pter
178,548,889 bp from pter
6,138 bases
Plus strand

Genomic View for C1orf220 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C1orf220 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C1orf220 Gene

Proteins for C1orf220 Gene

  • Protein details for C1orf220 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative uncharacterized protein C1orf220
    Protein Accession:
    Secondary Accessions:
    • B2RN72
    • Q8NAD3

    Protein attributes for C1orf220 Gene

    134 amino acids
    Molecular mass:
    15074 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C1orf220 Gene

Proteomics data for C1orf220 Gene at MOPED

Post-translational modifications for C1orf220 Gene

No Post-translational modifications

No data available for DME Specific Peptides for C1orf220 Gene

Domains for C1orf220 Gene

Protein Domains for C1orf220 Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C1orf220: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C1orf220 Gene

Function for C1orf220 Gene

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for C1orf220

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C1orf220 Gene

Localization for C1orf220 Gene

Subcellular locations from

Jensen Localization Image for C1orf220 Gene COMPARTMENTS Subcellular localization image for C1orf220 gene
Compartment Confidence
mitochondrion 2
cytosol 1
extracellular 1
golgi apparatus 1
nucleus 1
peroxisome 1
plasma membrane 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for C1orf220 Gene

Pathways for C1orf220 Gene

SuperPathways for C1orf220 Gene

No Data Available

Interacting Proteins for C1orf220 Gene

Gene Ontology (GO) - Biological Process for C1orf220 Gene


No data available for Pathways by source for C1orf220 Gene

Transcripts for C1orf220 Gene

mRNA/cDNA for C1orf220 Gene

Unigene Clusters for C1orf220 Gene

Chromosome 1 open reading frame 220:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for C1orf220

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for C1orf220 Gene

No ASD Table

Relevant External Links for C1orf220 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for C1orf220 Gene

mRNA expression in normal human tissues for C1orf220 Gene

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for C1orf220 Gene

SOURCE GeneReport for Unigene cluster for C1orf220 Gene Hs.668085

genes like me logo Genes that share expressions with C1orf220: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Expression partners for C1orf220 Gene

Orthologs for C1orf220 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for C1orf220 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia C1orf220 36
  • 98 (a)
Species with no ortholog for C1orf220:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C1orf220 Gene

Gene Tree for C1orf220 (if available)
Gene Tree for C1orf220 (if available)

Paralogs for C1orf220 Gene

No data available for Paralogs for C1orf220 Gene

Variants for C1orf220 Gene

Sequence variations from dbSNP and Humsavar for C1orf220 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs4076563 -- 178,547,766(+) cgaga(C/T)tctgt nc-transcript-variant
rs4233174 -- 178,541,362(+) TCTCT(A/G)TTGCT upstream-variant-2KB
rs4233175 -- 178,548,456(+) GGCCC(A/G)TTCAA nc-transcript-variant
rs4310403 -- 178,543,861(+) ATGTT(C/G)GCCAG intron-variant
rs4332328 -- 178,547,707(+) GAGGC(A/G)GAATT nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for C1orf220 Gene

Variant ID Type Subtype PubMed ID
nsv527862 CNV Loss 19592680

Relevant External Links for C1orf220 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C1orf220 Gene

Disorders for C1orf220 Gene

Relevant External Links for C1orf220

Genetic Association Database (GAD)

No disorders were found for C1orf220 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships and Genatlas for C1orf220 Gene

Publications for C1orf220 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. Discovery and refinement of loci associated with lipid levels. (PMID: 24097068) . … Abecasis G.R. (Nat. Genet. 2013) 3
  3. A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study. (PMID: 17903292) Hwang S.J. … Fox C.S. (BMC Med. Genet. 2007) 48
  4. Genome-wide association with select biomarker traits in the Framingham Heart Study. (PMID: 17903293) Benjamin E.J. … Vasan R.S. (BMC Med. Genet. 2007) 48
  5. Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project. (PMID: 17903300) Fox C.S. … Atwood L.D. (BMC Med. Genet. 2007) 48

Products for C1orf220 Gene

Sources for C1orf220 Gene

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