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Aliases for C1orf194 Gene

Aliases for C1orf194 Gene

  • Chromosome 1 Open Reading Frame 194 2 3

External Ids for C1orf194 Gene

Summaries for C1orf194 Gene

GeneCards Summary for C1orf194 Gene

C1orf194 (Chromosome 1 Open Reading Frame 194) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C1orf194 Gene

Genomics for C1orf194 Gene

Genomic Location for C1orf194 Gene

Start:
109,105,951 bp from pter
End:
109,113,862 bp from pter
Size:
7,912 bases
Orientation:
Minus strand

Genomic View for C1orf194 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C1orf194 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C1orf194 Gene

Regulatory Elements for C1orf194 Gene

Proteins for C1orf194 Gene

  • Protein details for C1orf194 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q5T5A4-CA194_HUMAN
    Recommended name:
    Uncharacterized protein C1orf194
    Protein Accession:
    Q5T5A4
    Secondary Accessions:
    • Q5T5A3

    Protein attributes for C1orf194 Gene

    Size:
    169 amino acids
    Molecular mass:
    19350 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for C1orf194 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for C1orf194 Gene

Proteomics data for C1orf194 Gene at MOPED

Post-translational modifications for C1orf194 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C1orf194 Gene

No data available for DME Specific Peptides for C1orf194 Gene

Domains for C1orf194 Gene

Protein Domains for C1orf194 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for C1orf194 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C1orf194: view

No data available for Gene Families and UniProtKB/Swiss-Prot for C1orf194 Gene

Function for C1orf194 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C1orf194 Gene

Localization for C1orf194 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C1orf194 Gene COMPARTMENTS Subcellular localization image for C1orf194 gene
Compartment Confidence
nucleus 3
cytosol 1
mitochondrion 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for C1orf194 Gene

Pathways for C1orf194 Gene

SuperPathways for C1orf194 Gene

No Data Available

Interacting Proteins for C1orf194 Gene

Gene Ontology (GO) - Biological Process for C1orf194 Gene

None

No data available for Pathways by source for C1orf194 Gene

Transcripts for C1orf194 Gene

Unigene Clusters for C1orf194 Gene

Chromosome 1 open reading frame 194:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C1orf194 Gene

ExUns: 1a · 1b ^ 2a · 2b · 2c ^ 3 ^ 4 ^ 5 ^ 6
SP1: - - -
SP2:
SP3: -
SP4: - - - - -
SP5: - -

Relevant External Links for C1orf194 Gene

GeneLoc Exon Structure for
C1orf194
ECgene alternative splicing isoforms for
C1orf194

Expression for C1orf194 Gene

mRNA expression in normal human tissues for C1orf194 Gene

mRNA differential expression in normal tissues according to GTEx for C1orf194 Gene

This gene is overexpressed in Testis (26.9).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for C1orf194 Gene

SOURCE GeneReport for Unigene cluster for C1orf194 Gene Hs.446962

genes like me logo Genes that share expressions with C1orf194: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for C1orf194 Gene

Orthologs for C1orf194 Gene

This gene was present in the common ancestor of chordates.

Orthologs for C1orf194 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C1H1orf194 35
  • 92.78 (n)
  • 91.08 (a)
C1orf194 36
  • 85 (a)
OneToOne
cow
(Bos Taurus)
Mammalia C1orf194 36
  • 71 (a)
OneToOne
C3H1orf194 35
  • 81.95 (n)
  • 77.71 (a)
dog
(Canis familiaris)
Mammalia C1orf194 36
  • 73 (a)
OneToOne
C6H1orf194 35
  • 84.08 (n)
  • 79.62 (a)
mouse
(Mus musculus)
Mammalia 1700013F07Rik 35
  • 81.96 (n)
  • 74.66 (a)
1700013F07Rik 16
1700013F07Rik 36
  • 65 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia C1orf194 36
  • 57 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia C1orf194 36
  • 66 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia RGD1309139 35
  • 79.59 (n)
  • 72.11 (a)
lizard
(Anolis carolinensis)
Reptilia C1orf194 36
  • 43 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia LOC100487688 35
  • 50.93 (n)
  • 46.4 (a)
zebrafish
(Danio rerio)
Actinopterygii C8H1orf194 36
  • 39 (a)
OneToOne
si:ch211-163l21.7 35
  • 53.99 (n)
  • 45.77 (a)
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 35 (a)
OneToOne
Species with no ortholog for C1orf194:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for C1orf194 Gene

ENSEMBL:
Gene Tree for C1orf194 (if available)
TreeFam:
Gene Tree for C1orf194 (if available)

Paralogs for C1orf194 Gene

No data available for Paralogs for C1orf194 Gene

Variants for C1orf194 Gene

Sequence variations from dbSNP and Humsavar for C1orf194 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs471609 -- 109,108,342(+) ttcac(C/T)atgtt intron-variant
rs504815 -- 109,107,059(-) CATTC(A/G)AGAAC reference, missense, intron-variant
rs533212 -- 109,106,248(-) TATAA(C/G)TACCT intron-variant, downstream-variant-500B
rs535642 -- 109,110,306(+) ACTAT(C/T)TCTAC intron-variant
rs579993 -- 109,108,579(+) GGTGT(A/G)GAGTG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for C1orf194 Gene

Variant ID Type Subtype PubMed ID
nsv831026 CNV Loss 17160897

Relevant External Links for C1orf194 Gene

HapMap Linkage Disequilibrium report
C1orf194

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C1orf194 Gene

Disorders for C1orf194 Gene

No disorders were found for C1orf194 Gene.

No data available for UniProtKB/Swiss-Prot for C1orf194 Gene

Publications for C1orf194 Gene

  1. Creation of genome-wide protein expression libraries using random activation of gene expression. (PMID: 11329013) Harrington J.J. … Ducar M. (Nat. Biotechnol. 2001) 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 4
  4. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory S.G. … Bentley D.R. (Nature 2006) 4

Products for C1orf194 Gene

Sources for C1orf194 Gene

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