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Aliases for C1orf167 Gene

Aliases for C1orf167 Gene

  • Chromosome 1 Open Reading Frame 167 2 3

External Ids for C1orf167 Gene

Summaries for C1orf167 Gene

GeneCards Summary for C1orf167 Gene

C1orf167 (Chromosome 1 Open Reading Frame 167) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C1orf167 Gene

Genomics for C1orf167 Gene

Genomic Location for C1orf167 Gene

Start:
11,761,787 bp from pter
End:
11,789,585 bp from pter
Size:
27,799 bases
Orientation:
Plus strand

Genomic View for C1orf167 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C1orf167 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C1orf167 Gene

Regulatory Elements for C1orf167 Gene

Proteins for C1orf167 Gene

  • Protein details for C1orf167 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q5SNV9-CA167_HUMAN
    Recommended name:
    Uncharacterized protein C1orf167
    Protein Accession:
    Q5SNV9
    Secondary Accessions:
    • Q8NDA9
    • Q8NDF3

    Protein attributes for C1orf167 Gene

    Size:
    1468 amino acids
    Molecular mass:
    162423 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=CAI15881.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};

    Alternative splice isoforms for C1orf167 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for C1orf167 Gene

Proteomics data for C1orf167 Gene at MOPED

Post-translational modifications for C1orf167 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C1orf167 Gene

No data available for DME Specific Peptides for C1orf167 Gene

Domains for C1orf167 Gene

Protein Domains for C1orf167 Gene

ProtoNet:
genes like me logo Genes that share domains with C1orf167: view

No data available for Gene Families and UniProtKB/Swiss-Prot for C1orf167 Gene

Function for C1orf167 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C1orf167 Gene

Localization for C1orf167 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C1orf167 Gene COMPARTMENTS Subcellular localization image for C1orf167 gene
Compartment Confidence
nucleus 2
cytosol 1
mitochondrion 1
plasma membrane 1

No data available for Gene Ontology (GO) - Cellular Components for C1orf167 Gene

Pathways for C1orf167 Gene

SuperPathways for C1orf167 Gene

No Data Available

Interacting Proteins for C1orf167 Gene

Gene Ontology (GO) - Biological Process for C1orf167 Gene

None

No data available for Pathways by source for C1orf167 Gene

Transcripts for C1orf167 Gene

mRNA/cDNA for C1orf167 Gene

Unigene Clusters for C1orf167 Gene

Chromosome 1 open reading frame 167:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C1orf167 Gene

No ASD Table

Relevant External Links for C1orf167 Gene

GeneLoc Exon Structure for
C1orf167
ECgene alternative splicing isoforms for
C1orf167

Expression for C1orf167 Gene

mRNA expression in normal human tissues for C1orf167 Gene

mRNA differential expression in normal tissues according to GTEx for C1orf167 Gene

This gene is overexpressed in Testis (50.8).

Integrated Proteomics: protein expression from ProteomicsDB, MOPED, and MaxQB for C1orf167 Gene

SOURCE GeneReport for Unigene cluster for C1orf167 Gene Hs.585415

genes like me logo Genes that share expressions with C1orf167: view

Orthologs for C1orf167 Gene

This gene was present in the common ancestor of mammals.

Orthologs for C1orf167 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C1orf167 37
  • 96 (a)
OneToOne
LOC737382 36
  • 98.04 (n)
  • 96.49 (a)
cow
(Bos Taurus)
Mammalia C1orf167 37
  • 54 (a)
OneToOne
dog
(Canis familiaris)
Mammalia C1orf167 37
  • 28 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia C1orf167 37
  • 30 (a)
OneToOne
Species with no ortholog for C1orf167:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C1orf167 Gene

ENSEMBL:
Gene Tree for C1orf167 (if available)
TreeFam:
Gene Tree for C1orf167 (if available)

Paralogs for C1orf167 Gene

Selected SIMAP similar genes for C1orf167 Gene using alignment to 7 proteins:

genes like me logo Genes that share paralogs with C1orf167: view

No data available for Paralogs for C1orf167 Gene

Variants for C1orf167 Gene

Sequence variations from dbSNP and Humsavar for C1orf167 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs4845875 -- 11,764,076(+) TGTTC(A/C)GACCT intron-variant
rs4845876 -- 11,764,185(+) GAGCC(A/C)CTGAG intron-variant
rs4845877 -- 11,764,246(+) GCAGC(C/T)AGGAG intron-variant
rs4845878 -- 11,764,289(+) GGGGT(A/G)GGGTT intron-variant
rs4845879 -- 11,764,499(+) TGGGC(A/G)GTTAC intron-variant

Relevant External Links for C1orf167 Gene

HapMap Linkage Disequilibrium report
C1orf167

No data available for Structural Variations from Database of Genomic Variants (DGV) for C1orf167 Gene

Disorders for C1orf167 Gene

Relevant External Links for C1orf167

Human Genome Epidemiology (HuGE) Navigator
C1orf167
genes like me logo Genes that share disorders with C1orf167: view

No data available for UniProtKB/Swiss-Prot for C1orf167 Gene

Publications for C1orf167 Gene

  1. Multiple transcription start sites and alternative splicing in the methylenetetrahydrofolate reductase gene result in two enzyme isoforms. (PMID: 12370778) Tran P. … Rozen R. (Mamm. Genome 2002) 2 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. Candidate gene polymorphisms for ischemic stroke. (PMID: 19729601) Matarin M. … Meschia J.F. (Stroke 2009) 3
  4. Gene-centric association signals for lipids and apolipoproteins identified via the HumanCVD BeadChip. (PMID: 19913121) Talmud P.J. … . (Am. J. Hum. Genet. 2009) 3
  5. Identification of type 2 diabetes-associated combination of SNPs using support vector machine. (PMID: 20416077) Ban H.J. … Park K.J. (BMC Genet. 2010) 3

Products for C1orf167 Gene

Sources for C1orf167 Gene

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