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Aliases for C1orf147 Gene

Aliases for C1orf147 Gene

  • Chromosome 1 Open Reading Frame 147 2 3 5

External Ids for C1orf147 Gene

Previous GeneCards Identifiers for C1orf147 Gene

  • GC01U901149
  • GC01M204731
  • GC01M206664
  • GC01M177363

Summaries for C1orf147 Gene

GeneCards Summary for C1orf147 Gene

C1orf147 (Chromosome 1 Open Reading Frame 147) is a Protein Coding gene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C1orf147 Gene

Genomics for C1orf147 Gene

Regulatory Elements for C1orf147 Gene

Enhancers for C1orf147 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G206573 2 FANTOM5 Ensembl ENCODE dbSUPER 11.8 -81.0 -81034 11.1 HDGF PKNOX1 CREB3L1 ARNT ZNF2 YY1 ZNF766 ZNF143 ZNF207 FOS RASSF5 MAPKAPK2 EIF2D IKBKE C1orf147 DYRK3 IL19 FCMR PIR41610 ENSG00000279946
GH01G206586 1.7 FANTOM5 Ensembl ENCODE dbSUPER 12.2 -91.5 -91549 6.4 CBX3 ATF1 ARNT RAD21 ZNF366 SCRT2 FOS RCOR1 CBFB ZHX2 RASSF5 EIF2D MAPKAPK2 C1orf147 IKBKE PIR41610 ENSG00000279946
GH01G206657 1.8 FANTOM5 Ensembl ENCODE dbSUPER 10.4 -161.1 -161092 3.4 HDGF ARNT YY1 TCF12 GLIS2 GATA2 ZNF143 NCOA1 REST SMARCB1 DYRK3 IKBKE MAPKAPK2 EIF2D C1orf147 RASSF5 PIR60472 LOC105372875
GH01G206554 1.6 Ensembl ENCODE dbSUPER 11.5 -65.2 -65181 16.8 HDGF PKNOX1 FOXA2 MLX CREB3L1 ARNT ZFP64 WRNIP1 ARID4B SIN3A EIF2D RASSF5 C1orf147 IKBKE MAPKAPK2 ENSG00000279946 PIR41610
GH01G206550 1.5 FANTOM5 ENCODE dbSUPER 11 -54.2 -54184 2.1 HDAC1 HDGF CBX3 PKNOX1 RB1 SIN3A ZNF2 RAD21 YY1 TCF12 RASSF5 EIF2D MAPKAPK2 IKBKE C1orf147 FCMR ENSG00000279946 PIR41610
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around C1orf147 on UCSC Golden Path with GeneCards custom track

Transcription factor binding sites by QIAGEN in the C1orf147 gene promoter:

Genomic Location for C1orf147 Gene

Chromosome:
1
Start:
206,491,116 bp from pter
End:
206,497,728 bp from pter
Size:
6,613 bases
Orientation:
Minus strand

Genomic View for C1orf147 Gene

Genes around C1orf147 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C1orf147 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C1orf147 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for C1orf147 Gene

Proteins for C1orf147 Gene

  • Protein details for C1orf147 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96MC9-CA147_HUMAN
    Recommended name:
    Uncharacterized protein C1orf147
    Protein Accession:
    Q96MC9
    Secondary Accessions:
    • Q5JTS5

    Protein attributes for C1orf147 Gene

    Size:
    270 amino acids
    Molecular mass:
    29841 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C1orf147 Gene

Post-translational modifications for C1orf147 Gene

No Post-translational modifications

No data available for DME Specific Peptides for C1orf147 Gene

Domains & Families for C1orf147 Gene

Protein Domains for C1orf147 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C1orf147: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C1orf147 Gene

Function for C1orf147 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for C1orf147 Gene

Localization for C1orf147 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for C1orf147 gene
Compartment Confidence
nucleus 2
cytosol 2
extracellular 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for C1orf147 Gene

Pathways & Interactions for C1orf147 Gene

SuperPathways for C1orf147 Gene

No Data Available

Interacting Proteins for C1orf147 Gene

Gene Ontology (GO) - Biological Process for C1orf147 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for C1orf147 Gene

Drugs & Compounds for C1orf147 Gene

No Compound Related Data Available

Transcripts for C1orf147 Gene

mRNA/cDNA for C1orf147 Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for C1orf147 Gene

No ASD Table

Relevant External Links for C1orf147 Gene

GeneLoc Exon Structure for
C1orf147
ECgene alternative splicing isoforms for
C1orf147

Expression for C1orf147 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for C1orf147 Gene

NURSA nuclear receptor signaling pathways regulating expression of C1orf147 Gene:

C1orf147
genes like me logo Genes that share expression patterns with C1orf147: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for C1orf147 Gene

Orthologs for C1orf147 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for C1orf147 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C1orf147 35
  • 96 (a)
OneToOne
Species where no ortholog for C1orf147 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C1orf147 Gene

ENSEMBL:
Gene Tree for C1orf147 (if available)
TreeFam:
Gene Tree for C1orf147 (if available)

Paralogs for C1orf147 Gene

No data available for Paralogs for C1orf147 Gene

Variants for C1orf147 Gene

Sequence variations from dbSNP and Humsavar for C1orf147 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs11118256 --
rs17024805 --
rs2336940 --

Variation tolerance for C1orf147 Gene

Gene Damage Index Score: 5.26; 70.23% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for C1orf147 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
C1orf147

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for C1orf147 Gene

Disorders for C1orf147 Gene

Relevant External Links for C1orf147

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
C1orf147

No disorders were found for C1orf147 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C1orf147 Gene

Publications for C1orf147 Gene

  1. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory S.G. … Bentley D.R. (Nature 2006) 3 4 64
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64

Products for C1orf147 Gene

Sources for C1orf147 Gene

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