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Aliases for C1orf147 Gene

Aliases for C1orf147 Gene

  • Chromosome 1 Open Reading Frame 147 2 3

External Ids for C1orf147 Gene

Previous GeneCards Identifiers for C1orf147 Gene

  • GC01U901149
  • GC01M204731
  • GC01M206664
  • GC01M177363

Summaries for C1orf147 Gene

GeneCards Summary for C1orf147 Gene

C1orf147 (Chromosome 1 Open Reading Frame 147) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C1orf147 Gene

Genomics for C1orf147 Gene

Regulatory Elements for C1orf147 Gene

Transcription factor binding sites by QIAGEN in the C1orf147 gene promoter:

Genomic Location for C1orf147 Gene

Start:
206,491,116 bp from pter
End:
206,497,728 bp from pter
Size:
6,613 bases
Orientation:
Minus strand

Genomic View for C1orf147 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C1orf147 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C1orf147 Gene

Proteins for C1orf147 Gene

  • Protein details for C1orf147 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96MC9-CA147_HUMAN
    Recommended name:
    Uncharacterized protein C1orf147
    Protein Accession:
    Q96MC9
    Secondary Accessions:
    • Q5JTS5

    Protein attributes for C1orf147 Gene

    Size:
    270 amino acids
    Molecular mass:
    29841 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C1orf147 Gene

Proteomics data for C1orf147 Gene at MOPED

Post-translational modifications for C1orf147 Gene

No Post-translational modifications

No data available for DME Specific Peptides for C1orf147 Gene

Domains for C1orf147 Gene

Protein Domains for C1orf147 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C1orf147: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C1orf147 Gene

Function for C1orf147 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C1orf147 Gene

Localization for C1orf147 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C1orf147 Gene COMPARTMENTS Subcellular localization image for C1orf147 gene
Compartment Confidence
cytosol 2
nucleus 2
extracellular 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for C1orf147 Gene

Pathways for C1orf147 Gene

SuperPathways for C1orf147 Gene

No Data Available

Interacting Proteins for C1orf147 Gene

Gene Ontology (GO) - Biological Process for C1orf147 Gene

None

No data available for Pathways by source for C1orf147 Gene

Transcripts for C1orf147 Gene

mRNA/cDNA for C1orf147 Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for C1orf147

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for C1orf147
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for C1orf147 Gene

No ASD Table

Relevant External Links for C1orf147 Gene

GeneLoc Exon Structure for
C1orf147
ECgene alternative splicing isoforms for
C1orf147

Expression for C1orf147 Gene

mRNA expression in normal human tissues for C1orf147 Gene

genes like me logo Genes that share expressions with C1orf147: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for C1orf147 Gene

Orthologs for C1orf147 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for C1orf147 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C1orf147 36
  • 96 (a)
OneToOne
Species with no ortholog for C1orf147:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C1orf147 Gene

ENSEMBL:
Gene Tree for C1orf147 (if available)
TreeFam:
Gene Tree for C1orf147 (if available)

Paralogs for C1orf147 Gene

No data available for Paralogs for C1orf147 Gene

Variants for C1orf147 Gene

Sequence variations from dbSNP and Humsavar for C1orf147 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
VAR_027074 -
VAR_027075 -
VAR_027076 -

Relevant External Links for C1orf147 Gene

HapMap Linkage Disequilibrium report
C1orf147

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for C1orf147 Gene

Disorders for C1orf147 Gene

No disorders were found for C1orf147 Gene.

No data available for UniProtKB/Swiss-Prot for C1orf147 Gene

Publications for C1orf147 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory S.G. … Bentley D.R. (Nature 2006) 3 4

Products for C1orf147 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate C1orf147
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for C1orf147
    • Block miRNA regulation of C1orf147 using miScript Target Protectors

    Sources for C1orf147 Gene

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