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Aliases for C1orf143 Gene

Quality Score for this RNA gene is

3

Aliases for C1orf143 Gene

  • Chromosome 1 Open Reading Frame 143 2 3

External Ids for C1orf143 Gene

Summaries for C1orf143 Gene

GeneCards Summary for C1orf143 Gene

C1orf143 (Chromosome 1 Open Reading Frame 143) is a RNA Gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C1orf143 Gene

Genomics for C1orf143 Gene

Genomic Location for C1orf143 Gene

Start:
218,510,096 bp from pter
End:
218,525,978 bp from pter
Size:
15,883 bases
Orientation:
Plus strand

Genomic View for C1orf143 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C1orf143 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence and Regulatory Elements for C1orf143 Gene

Proteins for C1orf143 Gene

Post-translational modifications for C1orf143 Gene

No Post-translational modifications

No data available for DME Specific Peptides for C1orf143 Gene

Domains for C1orf143 Gene

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for C1orf143 Gene

Function for C1orf143 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C1orf143 Gene

Localization for C1orf143 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C1orf143 Gene COMPARTMENTS Subcellular localization image for C1orf143 gene
Compartment Confidence
cytosol 2
extracellular 2
nucleus 1
plasma membrane 1

No data available for Gene Ontology (GO) - Cellular Components for C1orf143 Gene

Pathways for C1orf143 Gene

SuperPathways for C1orf143 Gene

No Data Available

Interacting Proteins for C1orf143 Gene

Gene Ontology (GO) - Biological Process for C1orf143 Gene

None

No data available for Pathways by source for C1orf143 Gene

Transcripts for C1orf143 Gene

mRNA/cDNA for C1orf143 Gene

(8) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for C1orf143 Gene

No ASD Table

Relevant External Links for C1orf143 Gene

GeneLoc Exon Structure for
C1orf143
ECgene alternative splicing isoforms for
C1orf143

Expression for C1orf143 Gene

mRNA expression in normal human tissues for C1orf143 Gene

mRNA differential expression in normal tissues according to GTEx for C1orf143 Gene

This gene is overexpressed in Brain - Hypothalamus (6.5), Brain - Hippocampus (6.0), Brain - Amygdala (5.9), Brain - Nucleus accumbens (basal ganglia) (5.6), and Brain - Frontal Cortex (BA9) (4.1).
genes like me logo Genes that share expressions with C1orf143: view

Orthologs for C1orf143 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for C1orf143 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C1orf143 37
  • 96 (a)
OneToOne
Species with no ortholog for C1orf143:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C1orf143 Gene

ENSEMBL:
Gene Tree for C1orf143 (if available)
TreeFam:
Gene Tree for C1orf143 (if available)

Paralogs for C1orf143 Gene

genes like me logo Genes that share paralogs with C1orf143: view

No data available for Paralogs for C1orf143 Gene

Variants for C1orf143 Gene

Relevant External Links for C1orf143 Gene

HapMap Linkage Disequilibrium report
C1orf143

No data available for Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for C1orf143 Gene

Disorders for C1orf143 Gene

No disorders were found for C1orf143 Gene.

No data available for UniProtKB/Swiss-Prot for C1orf143 Gene

Publications for C1orf143 Gene

  1. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3
  2. Creation of genome-wide protein expression libraries using random activation of gene expression. (PMID: 11329013) Harrington J.J. … Ducar M. (Nat. Biotechnol. 2001) 3

Products for C1orf143 Gene

Sources for C1orf143 Gene

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