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Aliases for C1orf131 Gene

Aliases for C1orf131 Gene

  • Chromosome 1 Open Reading Frame 131 2 3 5
  • CPERP-A 4

External Ids for C1orf131 Gene

Previous GeneCards Identifiers for C1orf131 Gene

  • GC01M227667
  • GC01M229429
  • GC01M231359
  • GC01M201842

Summaries for C1orf131 Gene

GeneCards Summary for C1orf131 Gene

C1orf131 (Chromosome 1 Open Reading Frame 131) is a Protein Coding gene. GO annotations related to this gene include poly(A) RNA binding.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C1orf131 Gene

Genomics for C1orf131 Gene

Regulatory Elements for C1orf131 Gene

Enhancers for C1orf131 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G230820 1.4 Ensembl ENCODE dbSUPER 27.2 +416.5 416493 8.2 TBP PKNOX1 ZNF23 ZNF766 ZNF548 FOS RELB CEBPB JUNB ZNF623 C1orf131 C1orf198 LOC101927604 CAPN9 COG2 ENSG00000244137 ENSG00000225656 RNA5SP79
GH01G231625 1.1 ENCODE 24.6 -386.4 -386390 3.3 HNRNPUL1 PKNOX1 FOXA2 AGO1 ARID4B SIN3A FEZF1 ZNF548 FOS ZNF263 C1orf131 DISC1 ARV1 COG2 RNU5A-5P
GH01G230862 1.9 FANTOM5 Ensembl ENCODE dbSUPER 12.6 +374.5 374548 7.6 CREB3L1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 KLF13 SP3 LOC101927604 C1orf198 C1orf131 FAM89A ENSG00000225656
GH01G231733 0.8 FANTOM5 24.4 -492.2 -492232 0.8 ZNF792 ZNF133 ZNF175 ZNF140 ZNF514 ZNF157 ZNF169 ZNF239 ZNF548 ZNF680 C1orf131 GC01P231693 ENSG00000274121
GH01G231210 1.6 FANTOM5 Ensembl ENCODE 11.1 +29.3 29251 2.0 ARID4B SIN3A ZNF2 ZNF48 GLIS2 ELK1 ZNF143 ZNF263 SP3 REST GNPAT C1orf131 FAM89A LOC644006 MIR1182 LOC101927604 C1orf198 COG2 SPRTN LOC149373
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around C1orf131 on UCSC Golden Path with GeneCards custom track

Promoters for C1orf131 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000021699 -213 2401 PKNOX1 CREB3L1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9

Genomic Location for C1orf131 Gene

Chromosome:
1
Start:
231,223,763 bp from pter
End:
231,241,187 bp from pter
Size:
17,425 bases
Orientation:
Minus strand

Genomic View for C1orf131 Gene

Genes around C1orf131 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C1orf131 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C1orf131 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C1orf131 Gene

Proteins for C1orf131 Gene

  • Protein details for C1orf131 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8NDD1-CA131_HUMAN
    Recommended name:
    Uncharacterized protein C1orf131
    Protein Accession:
    Q8NDD1
    Secondary Accessions:
    • Q5TBI0
    • Q5TBI1
    • Q6P6B4
    • Q7Z6H5
    • Q8N432
    • Q96NM6

    Protein attributes for C1orf131 Gene

    Size:
    294 amino acids
    Molecular mass:
    32766 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for C1orf131 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for C1orf131 Gene

Post-translational modifications for C1orf131 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C1orf131 Gene

No data available for DME Specific Peptides for C1orf131 Gene

Domains & Families for C1orf131 Gene

Protein Domains for C1orf131 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for C1orf131 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C1orf131: view

No data available for Gene Families and UniProtKB/Swiss-Prot for C1orf131 Gene

Function for C1orf131 Gene

Gene Ontology (GO) - Molecular Function for C1orf131 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003723 RNA binding IDA 22658674
genes like me logo Genes that share ontologies with C1orf131: view

Phenotypes for C1orf131 Gene

MGI mutant phenotypes for C1orf131:
inferred from 1 alleles
GenomeRNAi human phenotypes for C1orf131:
genes like me logo Genes that share phenotypes with C1orf131: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C1orf131 Gene

Localization for C1orf131 Gene

Subcellular locations from UniProtKB/Swiss-Prot for C1orf131 Gene

Chromosome.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for C1orf131 gene
Compartment Confidence
nucleus 4
cytosol 3
plasma membrane 1
cytoskeleton 1
mitochondrion 1
endoplasmic reticulum 1

Gene Ontology (GO) - Cellular Components for C1orf131 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005694 chromosome IDA,IEA 20813266
genes like me logo Genes that share ontologies with C1orf131: view

Pathways & Interactions for C1orf131 Gene

SuperPathways for C1orf131 Gene

No Data Available

Interacting Proteins for C1orf131 Gene

STRING Interaction Network Preview (showing 5 interactants - click image to see 6)
http://version10.5.string-db.org/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000355609%0d%0a9606.ENSP00000256078%0d%0a9606.ENSP00000395772%0d%0a9606.ENSP00000386458%0d%0a9606.ENSP00000325074%0d%0a9606.ENSP00000364794%0d%0a
Selected Interacting proteins: ENSP00000355609 Q8NDD1-CA131_HUMAN for C1orf131 Gene via STRING IID

Gene Ontology (GO) - Biological Process for C1orf131 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for C1orf131 Gene

Drugs & Compounds for C1orf131 Gene

No Compound Related Data Available

Transcripts for C1orf131 Gene

Unigene Clusters for C1orf131 Gene

Chromosome 1 open reading frame 131:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for C1orf131 Gene

ExUns: 1 ^ 2a · 2b ^ 3 ^ 4 ^ 5a · 5b ^ 6a · 6b ^ 7a · 7b
SP1: - - -
SP2: - - -
SP3:
SP4:
SP5:

Relevant External Links for C1orf131 Gene

GeneLoc Exon Structure for
C1orf131
ECgene alternative splicing isoforms for
C1orf131

Expression for C1orf131 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for C1orf131 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Protein differential expression in normal tissues from HIPED for C1orf131 Gene

This gene is overexpressed in Platelet (54.6) and Blymphocyte (9.3).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MaxQB, and MOPED for C1orf131 Gene



Protein tissue co-expression partners for C1orf131 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of C1orf131 Gene:

C1orf131

SOURCE GeneReport for Unigene cluster for C1orf131 Gene:

Hs.743464

Evidence on tissue expression from TISSUES for C1orf131 Gene

  • Nervous system(4.6)
  • Eye(4)
  • Pancreas(2.4)
genes like me logo Genes that share expression patterns with C1orf131: view

Primer Products

No data available for mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for C1orf131 Gene

Orthologs for C1orf131 Gene

This gene was present in the common ancestor of chordates.

Orthologs for C1orf131 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C1H1orf131 34
  • 98.98 (n)
C1orf131 35
  • 98 (a)
OneToOne
dog
(Canis familiaris)
Mammalia C4H1orf131 34
  • 82.69 (n)
C1orf131 35
  • 75 (a)
OneToOne
cow
(Bos Taurus)
Mammalia LOC514234 34
  • 80.26 (n)
C1orf131 35
  • 69 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia RGD1562218 34
  • 76.21 (n)
mouse
(Mus musculus)
Mammalia 2810004N23Rik 34 16 35
  • 74.58 (n)
oppossum
(Monodelphis domestica)
Mammalia C1orf131 35
  • 61 (a)
OneToOne
chicken
(Gallus gallus)
Aves C1ORF131 34
  • 57.54 (n)
C1orf131 35
  • 34 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia C1orf131 35
  • 41 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia c1orf131 34
  • 53.69 (n)
zebrafish
(Danio rerio)
Actinopterygii zgc:194224 34
  • 54.55 (n)
C20H1orf131 35
  • 35 (a)
OneToOne
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.1442 34
Species where no ortholog for C1orf131 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for C1orf131 Gene

ENSEMBL:
Gene Tree for C1orf131 (if available)
TreeFam:
Gene Tree for C1orf131 (if available)

Paralogs for C1orf131 Gene

No data available for Paralogs for C1orf131 Gene

Variants for C1orf131 Gene

Sequence variations from dbSNP and Humsavar for C1orf131 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs112452735 Likely benign 231,241,295(+) CCGTC(C/G/T)TGAGC upstream-variant-2KB, utr-variant-5-prime
rs113480953 Likely benign 231,241,404(+) TAACT(C/T)TTATT upstream-variant-2KB, reference, missense, utr-variant-5-prime
rs113752547 Uncertain significance 231,241,234(+) GCGGC(A/C/G)CCCGG upstream-variant-2KB, utr-variant-5-prime
rs199844062 Uncertain significance 231,241,435(+) CCCAG(C/T)GCTGT upstream-variant-2KB, reference, synonymous-codon, utr-variant-5-prime
rs201907247 Uncertain significance 231,241,332(+) CACCA(A/C/T)GGCTT upstream-variant-2KB, utr-variant-5-prime

Structural Variations from Database of Genomic Variants (DGV) for C1orf131 Gene

Variant ID Type Subtype PubMed ID
esv3589093 CNV gain 21293372
esv3589106 CNV gain 21293372
nsv1000488 CNV gain 25217958
nsv1011066 CNV gain 25217958

Variation tolerance for C1orf131 Gene

Residual Variation Intolerance Score: 63.5% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 4.32; 62.98% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for C1orf131 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
C1orf131

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C1orf131 Gene

Disorders for C1orf131 Gene

Relevant External Links for C1orf131

Genetic Association Database (GAD)
C1orf131
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
C1orf131

No disorders were found for C1orf131 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C1orf131 Gene

Publications for C1orf131 Gene

  1. The protein composition of mitotic chromosomes determined using multiclassifier combinatorial proteomics. (PMID: 20813266) Ohta S. … Rappsilber J. (Cell 2010) 3 4 64
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64
  3. The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PMID: 12975309) Clark H.F. … Gray A.M. (Genome Res. 2003) 2 3 64
  4. Gene essentiality and synthetic lethality in haploid human cells. (PMID: 26472760) Blomen V.A. … Brummelkamp T.R. (Science 2015) 3 64
  5. A human interactome in three quantitative dimensions organized by stoichiometries and abundances. (PMID: 26496610) Hein M.Y. … Mann M. (Cell 2015) 3 64

Products for C1orf131 Gene

Sources for C1orf131 Gene

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