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Aliases for C1orf116 Gene

Aliases for C1orf116 Gene

  • Chromosome 1 Open Reading Frame 116 2 3
  • SARG 3 4
  • Specifically Androgen-Regulated Gene Protein 3
  • Specifically Androgen-Regulated Protein 3
  • Specifically Androgen-Regulated Gene 2
  • SARG, 6

External Ids for C1orf116 Gene

Summaries for C1orf116 Gene

GeneCards Summary for C1orf116 Gene

C1orf116 (Chromosome 1 Open Reading Frame 116) is a Protein Coding gene.

UniProtKB/Swiss-Prot for C1orf116 Gene

  • Putative androgen-specific receptor.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C1orf116 Gene

Genomics for C1orf116 Gene

Genomic Location for C1orf116 Gene

Start:
207,018,521 bp from pter
End:
207,032,761 bp from pter
Size:
14,241 bases
Orientation:
Minus strand

Genomic View for C1orf116 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C1orf116 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C1orf116 Gene

Regulatory Elements for C1orf116 Gene

Proteins for C1orf116 Gene

  • Protein details for C1orf116 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9BW04-SARG_HUMAN
    Recommended name:
    Specifically androgen-regulated gene protein
    Protein Accession:
    Q9BW04
    Secondary Accessions:
    • C9JV41
    • Q658X3

    Protein attributes for C1orf116 Gene

    Size:
    601 amino acids
    Molecular mass:
    63964 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for C1orf116 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for C1orf116 Gene

Proteomics data for C1orf116 Gene at MOPED

Post-translational modifications for C1orf116 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C1orf116 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C1orf116 Gene

Domains for C1orf116 Gene

Protein Domains for C1orf116 Gene

InterPro:
ProtoNet:

UniProtKB/Swiss-Prot:

SARG_HUMAN
Family:
  • Belongs to the SARG family.:
    • Q9BW04
genes like me logo Genes that share domains with C1orf116: view

No data available for Gene Families for C1orf116 Gene

Function for C1orf116 Gene

Molecular function for C1orf116 Gene

UniProtKB/Swiss-Prot Function: Putative androgen-specific receptor.
UniProtKB/Swiss-Prot Induction: Expression is up-regulated by androgen, but not by glucocorticoids

Gene Ontology (GO) - Molecular Function for C1orf116 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003674 molecular_function ND --
GO:0005515 protein binding IPI 19447967
genes like me logo Genes that share ontologies with C1orf116: view

Phenotypes for C1orf116 Gene

GenomeRNAi human phenotypes for C1orf116:
genes like me logo Genes that share phenotypes with C1orf116: view

No data available for Enzyme Numbers (IUBMB) , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C1orf116 Gene

Localization for C1orf116 Gene

Subcellular locations from UniProtKB/Swiss-Prot for C1orf116 Gene

Cytoplasm.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C1orf116 Gene COMPARTMENTS Subcellular localization image for C1orf116 gene
Compartment Confidence
cytosol 4
plasma membrane 4
nucleus 3

Gene Ontology (GO) - Cellular Components for C1orf116 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IDA 15525603
GO:0070062 extracellular exosome IDA 19056867
genes like me logo Genes that share ontologies with C1orf116: view

Pathways for C1orf116 Gene

SuperPathways for C1orf116 Gene

No Data Available

Interacting Proteins for C1orf116 Gene

Gene Ontology (GO) - Biological Process for C1orf116 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0008150 biological_process ND --
genes like me logo Genes that share ontologies with C1orf116: view

No data available for Pathways by source for C1orf116 Gene

Compounds for C1orf116 Gene

(1) Novoseek inferred chemical compound relationships for C1orf116 Gene

Compound -log(P) Hits PubMed IDs
testosterone 46.1 4
genes like me logo Genes that share compounds with C1orf116: view

Transcripts for C1orf116 Gene

Unigene Clusters for C1orf116 Gene

Chromosome 1 open reading frame 116:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C1orf116 Gene

ExUns: 1a · 1b ^ 2 ^ 3a · 3b ^ 4a · 4b ^ 5a · 5b · 5c · 5d
SP1: - -
SP2: -
SP3: - -
SP4: - - -
SP5: - - - -
SP6:

Relevant External Links for C1orf116 Gene

GeneLoc Exon Structure for
C1orf116
ECgene alternative splicing isoforms for
C1orf116

Expression for C1orf116 Gene

mRNA expression in normal human tissues for C1orf116 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for C1orf116 Gene

This gene is overexpressed in Esophagus - Mucosa (13.8), Lung (5.4), Skin - Sun Exposed (Lower leg) (5.0), Stomach (4.7), Minor Salivary Gland (4.5), and Skin - Not Sun Exposed (Suprapubic) (4.3).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for C1orf116 Gene

SOURCE GeneReport for Unigene cluster for C1orf116 Gene Hs.32417

mRNA Expression by UniProt/SwissProt for C1orf116 Gene

Q9BW04-SARG_HUMAN
Tissue specificity: Highly expressed in prostate.
genes like me logo Genes that share expressions with C1orf116: view

Orthologs for C1orf116 Gene

This gene was present in the common ancestor of chordates.

Orthologs for C1orf116 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C1H1orf116 36
  • 98.89 (n)
  • 98 (a)
C1orf116 37
  • 97 (a)
OneToOne
cow
(Bos Taurus)
Mammalia C16H1orf116 36
  • 77.29 (n)
  • 70.3 (a)
SARG 37
  • 70 (a)
OneToOne
dog
(Canis familiaris)
Mammalia C1orf116 37
  • 54 (a)
OneToOne
mouse
(Mus musculus)
Mammalia AA986860 36
  • 73.27 (n)
  • 62.92 (a)
AA986860 16
AA986860 37
  • 62 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia C1orf116 37
  • 53 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia C1orf116 37
  • 48 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia LOC498222 36
  • 72.7 (n)
  • 62.48 (a)
chicken
(Gallus gallus)
Aves C1ORF116 36
  • 55.42 (n)
  • 49.63 (a)
C1orf116 37
  • 38 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia C1orf116 37
  • 36 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia c1orf116 36
  • 49.02 (n)
  • 43.93 (a)
zebrafish
(Danio rerio)
Actinopterygii C11H1orf116 (1 of 2) 37
  • 24 (a)
OneToMany
C23H1orf116 (2 of 2) 37
  • 33 (a)
OneToMany
Species with no ortholog for C1orf116:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for C1orf116 Gene

ENSEMBL:
Gene Tree for C1orf116 (if available)
TreeFam:
Gene Tree for C1orf116 (if available)

Paralogs for C1orf116 Gene

No data available for Paralogs for C1orf116 Gene

Variants for C1orf116 Gene

Sequence variations from dbSNP and Humsavar for C1orf116 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs3020 -- 207,018,591(+) ACTTA(G/T)TTATC utr-variant-3-prime
rs10877 -- 207,018,835(+) CTCTC(C/T)TCTAG utr-variant-3-prime
rs706846 -- 207,024,911(-) CACTG(C/T)CCATA utr-variant-5-prime, reference, missense, intron-variant
rs901107 -- 207,019,832(+) TTGTC(A/G)TGTGT utr-variant-3-prime
rs1340234 -- 207,029,039(-) GAGGC(C/T)AAGAG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for C1orf116 Gene

Variant ID Type Subtype PubMed ID
nsv832426 CNV Gain 17160897

Relevant External Links for C1orf116 Gene

HapMap Linkage Disequilibrium report
C1orf116

Disorders for C1orf116 Gene

(1) Novoseek inferred disease relationships for C1orf116 Gene

Disease -log(P) Hits PubMed IDs
prostate cancer 43.9 2
genes like me logo Genes that share disorders with C1orf116: view

No data available for UniProtKB/Swiss-Prot for C1orf116 Gene

Publications for C1orf116 Gene

  1. A bioinformatics-based functional analysis shows that the specifically androgen-regulated gene SARG contains an active direct repeat androgen response element in the first intron. (PMID: 15525603) Steketee K. … Trapman J. (J. Mol. Endocrinol. 2004) 2 3 4 23
  2. Both androgen receptor and glucocorticoid receptor are able to induce prostate-specific antigen expression, but differ in their growth-stimulating properties of LNCaP cells. (PMID: 9389513) Cleutjens C.B. … Trapman J. (Endocrinology 1997) 2 3
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  4. Towards a proteome-scale map of the human protein-protein interaction network. (PMID: 16189514) Rual J.F. … Vidal M. (Nature 2005) 3
  5. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for C1orf116 Gene

Sources for C1orf116 Gene

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