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Aliases for C1orf115 Gene

Aliases for C1orf115 Gene

  • Chromosome 1 Open Reading Frame 115 2 3

External Ids for C1orf115 Gene

Previous GeneCards Identifiers for C1orf115 Gene

  • GC01P217252
  • GC01P218929
  • GC01P220863
  • GC01P191538

Summaries for C1orf115 Gene

GeneCards Summary for C1orf115 Gene

C1orf115 (Chromosome 1 Open Reading Frame 115) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C1orf115 Gene

Genomics for C1orf115 Gene

Regulatory Elements for C1orf115 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for C1orf115 Gene

220,689,845 bp from pter
220,699,157 bp from pter
9,313 bases
Plus strand

Genomic View for C1orf115 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C1orf115 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C1orf115 Gene

Proteins for C1orf115 Gene

  • Protein details for C1orf115 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Uncharacterized protein C1orf115
    Protein Accession:
    Secondary Accessions:
    • B3KRN3
    • D3DTB2

    Protein attributes for C1orf115 Gene

    142 amino acids
    Molecular mass:
    15517 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C1orf115 Gene

Proteomics data for C1orf115 Gene at MOPED

Post-translational modifications for C1orf115 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C1orf115 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C1orf115 Gene

Domains for C1orf115 Gene

Protein Domains for C1orf115 Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C1orf115: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C1orf115 Gene

Function for C1orf115 Gene

Animal Model Products

CRISPR Products

miRNA for C1orf115 Gene

miRTarBase miRNAs that target C1orf115

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for C1orf115

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for C1orf115 Gene

Localization for C1orf115 Gene

Subcellular locations from UniProtKB/Swiss-Prot for C1orf115 Gene

Membrane; Single-pass membrane protein.

Subcellular locations from

Jensen Localization Image for C1orf115 Gene COMPARTMENTS Subcellular localization image for C1orf115 gene
Compartment Confidence
nucleus 3
mitochondrion 2

Gene Ontology (GO) - Cellular Components for C1orf115 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with C1orf115: view

Pathways for C1orf115 Gene

SuperPathways for C1orf115 Gene

No Data Available

Interacting Proteins for C1orf115 Gene

Gene Ontology (GO) - Biological Process for C1orf115 Gene


No data available for Pathways by source for C1orf115 Gene

Transcripts for C1orf115 Gene

mRNA/cDNA for C1orf115 Gene

(144) Selected AceView cDNA sequences:
(5) Additional mRNA sequences :
(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for C1orf115 Gene

Chromosome 1 open reading frame 115:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for C1orf115

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for C1orf115 Gene

No ASD Table

Relevant External Links for C1orf115 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for C1orf115 Gene

mRNA expression in normal human tissues for C1orf115 Gene

mRNA differential expression in normal tissues according to GTEx for C1orf115 Gene

This gene is overexpressed in Brain - Cortex (4.3), Brain - Frontal Cortex (BA9) (4.2), and Liver (4.1).

SOURCE GeneReport for Unigene cluster for C1orf115 Gene Hs.519839

genes like me logo Genes that share expressions with C1orf115: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for C1orf115 Gene

Orthologs for C1orf115 Gene

This gene was present in the common ancestor of mammals.

Orthologs for C1orf115 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia C16H1orf115 35
  • 86.03 (n)
  • 82.35 (a)
C16H1orf115 36
  • 80 (a)
(Mus musculus)
Mammalia C130074G19Rik 35
  • 76.83 (n)
  • 70.21 (a)
C130074G19Rik 16
C130074G19Rik 36
  • 70 (a)
(Pan troglodytes)
Mammalia C1H1orf115 35
  • 99.06 (n)
  • 99.3 (a)
C1orf115 36
  • 99 (a)
(Rattus norvegicus)
Mammalia RGD1310587 35
  • 77.38 (n)
  • 72.14 (a)
(Canis familiaris)
Mammalia C1orf115 36
  • 92 (a)
(Monodelphis domestica)
Mammalia C1orf115 36
  • 52 (a)
(Ornithorhynchus anatinus)
Mammalia C1orf115 36
  • 51 (a)
Species with no ortholog for C1orf115:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C1orf115 Gene

Gene Tree for C1orf115 (if available)
Gene Tree for C1orf115 (if available)

Paralogs for C1orf115 Gene

No data available for Paralogs for C1orf115 Gene

Variants for C1orf115 Gene

Sequence variations from dbSNP and Humsavar for C1orf115 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs14850 -- 220,699,073(-) CAAGC(A/G)AAAGC utr-variant-3-prime
rs337152 -- 220,699,328(-) GGGGT(C/T)TCTCC downstream-variant-500B
rs337153 -- 220,697,978(-) ATGAG(A/G)TCAAA utr-variant-3-prime
rs337154 -- 220,697,781(-) TCCAA(C/T)GTCCT utr-variant-3-prime
rs337155 -- 220,696,553(-) ATTCT(A/G)CCATC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for C1orf115 Gene

Variant ID Type Subtype PubMed ID
nsv468194 CNV Loss 19166990
nsv826742 CNV Loss 20364138

Relevant External Links for C1orf115 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C1orf115 Gene

Disorders for C1orf115 Gene

Relevant External Links for C1orf115

Genetic Association Database (GAD)

No disorders were found for C1orf115 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships and Genatlas for C1orf115 Gene

Publications for C1orf115 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory S.G. … Bentley D.R. (Nature 2006) 3 4
  5. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) OlA!h J. … OvA!di J. (J. Biol. Chem. 2011) 3

Products for C1orf115 Gene

Sources for C1orf115 Gene

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