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Aliases for C1orf105 Gene

Aliases for C1orf105 Gene

  • Chromosome 1 Open Reading Frame 105 2 3

External Ids for C1orf105 Gene

Summaries for C1orf105 Gene

GeneCards Summary for C1orf105 Gene

C1orf105 (Chromosome 1 Open Reading Frame 105) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C1orf105 Gene

Genomics for C1orf105 Gene

Genomic Location for C1orf105 Gene

Start:
172,420,688 bp from pter
End:
172,468,831 bp from pter
Size:
48,144 bases
Orientation:
Plus strand

Genomic View for C1orf105 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C1orf105 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C1orf105 Gene

Regulatory Elements for C1orf105 Gene

Proteins for C1orf105 Gene

  • Protein details for C1orf105 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    O95561-CA105_HUMAN
    Recommended name:
    Uncharacterized protein C1orf105
    Protein Accession:
    O95561
    Secondary Accessions:
    • Q8IY02

    Protein attributes for C1orf105 Gene

    Size:
    183 amino acids
    Molecular mass:
    21209 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C1orf105 Gene

Proteomics data for C1orf105 Gene at MOPED

Post-translational modifications for C1orf105 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C1orf105 Gene

No data available for DME Specific Peptides for C1orf105 Gene

Domains for C1orf105 Gene

Protein Domains for C1orf105 Gene

InterPro:
ProtoNet:
genes like me logo Genes that share domains with C1orf105: view

No data available for Gene Families and UniProtKB/Swiss-Prot for C1orf105 Gene

Function for C1orf105 Gene

Gene Ontology (GO) - Molecular Function for C1orf105 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with C1orf105: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C1orf105 Gene

Localization for C1orf105 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C1orf105 Gene COMPARTMENTS Subcellular localization image for C1orf105 gene
Compartment Confidence
nucleus 2
cytosol 1
extracellular 1
mitochondrion 1

No data available for Gene Ontology (GO) - Cellular Components for C1orf105 Gene

Pathways for C1orf105 Gene

SuperPathways for C1orf105 Gene

No Data Available

Interacting Proteins for C1orf105 Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000356700%0d%0a9606.ENSP00000216455%0d%0a
Selected Interacting proteins: ENSP00000356700 O95561-CA105_HUMAN for C1orf105 Gene via STRING UniProtKB

Gene Ontology (GO) - Biological Process for C1orf105 Gene

None

No data available for Pathways by source for C1orf105 Gene

Transcripts for C1orf105 Gene

Unigene Clusters for C1orf105 Gene

Chromosome 1 open reading frame 105:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C1orf105 Gene

No ASD Table

Relevant External Links for C1orf105 Gene

GeneLoc Exon Structure for
C1orf105
ECgene alternative splicing isoforms for
C1orf105

Expression for C1orf105 Gene

mRNA expression in normal human tissues for C1orf105 Gene

mRNA differential expression in normal tissues according to GTEx for C1orf105 Gene

This gene is overexpressed in Testis (19.7), Heart - Left Ventricle (14.4), and Heart - Atrial Appendage (14.1).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for C1orf105 Gene

SOURCE GeneReport for Unigene cluster for C1orf105 Gene Hs.517991

genes like me logo Genes that share expressions with C1orf105: view

Orthologs for C1orf105 Gene

This gene was present in the common ancestor of mammals.

Orthologs for C1orf105 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C1H1orf105 36
  • 98.91 (n)
  • 97.81 (a)
C1orf105 37
  • 97 (a)
OneToOne
cow
(Bos Taurus)
Mammalia C16H1orf105 36
  • 83.06 (n)
  • 71.04 (a)
dog
(Canis familiaris)
Mammalia -- 37
  • 68 (a)
OneToMany
-- 37
  • 80 (a)
OneToMany
C7H1orf105 36
  • 84.88 (n)
  • 73.77 (a)
mouse
(Mus musculus)
Mammalia 4930558K02Rik 36
  • 72.1 (n)
  • 60.11 (a)
4930558K02Rik 16
4930558K02Rik 37
  • 58 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia RGD1309106 36
  • 75 (n)
  • 60.8 (a)
Species with no ortholog for C1orf105:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C1orf105 Gene

ENSEMBL:
Gene Tree for C1orf105 (if available)
TreeFam:
Gene Tree for C1orf105 (if available)

Paralogs for C1orf105 Gene

No data available for Paralogs for C1orf105 Gene

Variants for C1orf105 Gene

Sequence variations from dbSNP and Humsavar for C1orf105 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs387988 -- 172,434,310(-) tggtg(C/T)tgaaa intron-variant
rs404514 -- 172,434,030(-) TTGAT(A/C)CCTTT intron-variant
rs739249 -- 172,450,820(-) CCTCT(C/T)CCTGT intron-variant, upstream-variant-2KB
rs743948 -- 172,456,637(+) GTCCT(A/G)GGAGC intron-variant
rs763130 -- 172,457,430(-) ACTGG(A/G)CCTAA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for C1orf105 Gene

Variant ID Type Subtype PubMed ID
esv2669467 CNV Deletion 23128226

Relevant External Links for C1orf105 Gene

HapMap Linkage Disequilibrium report
C1orf105

Disorders for C1orf105 Gene

Relevant External Links for C1orf105

Human Genome Epidemiology (HuGE) Navigator
C1orf105
genes like me logo Genes that share disorders with C1orf105: view

No data available for UniProtKB/Swiss-Prot for C1orf105 Gene

Publications for C1orf105 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory S.G. … Bentley D.R. (Nature 2006) 3 4
  4. Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PMID: 17081983) Olsen J.V. … Mann M. (Cell 2006) 3
  5. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3

Products for C1orf105 Gene

Sources for C1orf105 Gene

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