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Aliases for C1RL-AS1 Gene

Subcategory (RNA class) for C1RL-AS1 Gene


Quality Score for this RNA gene is


Aliases for C1RL-AS1 Gene

  • C1RL Antisense RNA 1 2 3
  • C1RL Antisense RNA 1 (Non-Protein Coding) 2 3
  • ABC12-49244600F4.3 3
  • MATL2963 3

External Ids for C1RL-AS1 Gene

ORGUL Members for C1RL-AS1 Gene

Previous GeneCards Identifiers for C1RL-AS1 Gene

  • GC12P007262

Summaries for C1RL-AS1 Gene

GeneCards Summary for C1RL-AS1 Gene

C1RL-AS1 (C1RL Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C1RL-AS1 Gene

Genomics for C1RL-AS1 Gene

Genomic Location for C1RL-AS1 Gene

7,108,052 bp from pter
7,122,501 bp from pter
14,450 bases
Plus strand

Genomic View for C1RL-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C1RL-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C1RL-AS1 Gene

No data available for Regulatory Elements for C1RL-AS1 Gene

Proteins for C1RL-AS1 Gene

Post-translational modifications for C1RL-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for C1RL-AS1 Gene

Domains for C1RL-AS1 Gene

Gene Families for C1RL-AS1 Gene

  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C1RL-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C1RL-AS1 Gene

Function for C1RL-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C1RL-AS1 Gene

Localization for C1RL-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for C1RL-AS1 Gene

Pathways for C1RL-AS1 Gene

SuperPathways for C1RL-AS1 Gene

No Data Available

Interacting Proteins for C1RL-AS1 Gene

Gene Ontology (GO) - Biological Process for C1RL-AS1 Gene


No data available for Pathways by source for C1RL-AS1 Gene

Transcripts for C1RL-AS1 Gene

mRNA/cDNA for C1RL-AS1 Gene

(4) Additional mRNA sequences :
(7) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for C1RL-AS1 Gene

C1RL antisense RNA 1:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for C1RL-AS1

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for C1RL-AS1 Gene

No ASD Table

Relevant External Links for C1RL-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for C1RL-AS1 Gene

mRNA expression in normal human tissues for C1RL-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for C1RL-AS1 Gene

This gene is overexpressed in Liver (4.4).

SOURCE GeneReport for Unigene cluster for C1RL-AS1 Gene Hs.744212

genes like me logo Genes that share expressions with C1RL-AS1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for C1RL-AS1 Gene

Orthologs for C1RL-AS1 Gene

Evolution for C1RL-AS1 Gene

Gene Tree for C1RL-AS1 (if available)
Gene Tree for C1RL-AS1 (if available)

No data available for Orthologs for C1RL-AS1 Gene

Paralogs for C1RL-AS1 Gene

No data available for Paralogs for C1RL-AS1 Gene

Variants for C1RL-AS1 Gene

Sequence variations from dbSNP and Humsavar for C1RL-AS1 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type MAF
rs968 -- 7,116,083(+) GCTGG(C/T)ATCCT nc-transcript-variant
rs1027 -- 7,116,080(+) tcaGC(C/T)GGTAT nc-transcript-variant
rs730165 -- 7,118,208(-) CCTCA(C/T)TGGAG nc-transcript-variant
rs2290240 -- 7,121,977(-) CAAGA(A/T)GTGAG downstream-variant-500B
rs2305340 -- 7,113,370(-) TTATA(C/G/T)GCAAG intron-variant

Relevant External Links for C1RL-AS1 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for C1RL-AS1 Gene

Disorders for C1RL-AS1 Gene

No disorders were found for C1RL-AS1 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for C1RL-AS1 Gene

Publications for C1RL-AS1 Gene

  1. The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PMID: 12975309) Clark H.F. … Gray A.M. (Genome Res. 2003) 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for C1RL-AS1 Gene

Sources for C1RL-AS1 Gene

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