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Aliases for C1RL-AS1 Gene

Subcategory (RNA class) for C1RL-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for C1RL-AS1 Gene

  • C1RL Antisense RNA 1 2 3 5
  • C1RL Antisense RNA 1 (Non-Protein Coding) 2 3
  • ABC12-49244600F4.3 3
  • MATL2963 3

External Ids for C1RL-AS1 Gene

Previous GeneCards Identifiers for C1RL-AS1 Gene

  • GC12P007262
  • GC12P007128
  • GC12P007208

Summaries for C1RL-AS1 Gene

GeneCards Summary for C1RL-AS1 Gene

C1RL-AS1 (C1RL Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C1RL-AS1 Gene

Genomics for C1RL-AS1 Gene

Regulatory Elements for C1RL-AS1 Gene

Enhancers for C1RL-AS1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around C1RL-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for C1RL-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around C1RL-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for C1RL-AS1 Gene

7,108,052 bp from pter
7,122,501 bp from pter
14,450 bases
Plus strand

Genomic View for C1RL-AS1 Gene

Genes around C1RL-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C1RL-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C1RL-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C1RL-AS1 Gene

Proteins for C1RL-AS1 Gene

Post-translational modifications for C1RL-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for C1RL-AS1 Gene

Domains & Families for C1RL-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C1RL-AS1 Gene

Function for C1RL-AS1 Gene

Phenotypes for C1RL-AS1 Gene

GenomeRNAi human phenotypes for C1RL-AS1:
genes like me logo Genes that share phenotypes with C1RL-AS1: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C1RL-AS1 Gene

Localization for C1RL-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for C1RL-AS1 Gene

Pathways & Interactions for C1RL-AS1 Gene

SuperPathways for C1RL-AS1 Gene

No Data Available

Interacting Proteins for C1RL-AS1 Gene

Gene Ontology (GO) - Biological Process for C1RL-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for C1RL-AS1 Gene

Drugs & Compounds for C1RL-AS1 Gene

No Compound Related Data Available

Transcripts for C1RL-AS1 Gene

mRNA/cDNA for C1RL-AS1 Gene

(4) Additional mRNA sequences :
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for C1RL-AS1 Gene

C1RL antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C1RL-AS1 Gene

No ASD Table

Relevant External Links for C1RL-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for C1RL-AS1 Gene

mRNA expression in normal human tissues for C1RL-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for C1RL-AS1 Gene

This gene is overexpressed in Liver (x4.4).

SOURCE GeneReport for Unigene cluster for C1RL-AS1 Gene Hs.744212

genes like me logo Genes that share expression patterns with C1RL-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for C1RL-AS1 Gene

Orthologs for C1RL-AS1 Gene

Evolution for C1RL-AS1 Gene

Gene Tree for C1RL-AS1 (if available)
Gene Tree for C1RL-AS1 (if available)

No data available for Orthologs for C1RL-AS1 Gene

Paralogs for C1RL-AS1 Gene

No data available for Paralogs for C1RL-AS1 Gene

Variants for C1RL-AS1 Gene

Sequence variations from dbSNP and Humsavar for C1RL-AS1 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type
rs968 -- 7,116,083(+) GCTGG(C/T)ATCCT nc-transcript-variant
rs1027 -- 7,116,080(+) tcaGC(C/T)GGTAT nc-transcript-variant
rs10845008 -- 7,117,093(+) CCAGA(C/T)GGTCA nc-transcript-variant
rs7294478 -- 7,114,209(+) CTCGC(A/G)TGTGT intron-variant
rs7297327 -- 7,113,984(+) CCCAA(C/T)GGAGT intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for C1RL-AS1 Gene

Disorders for C1RL-AS1 Gene

Relevant External Links for C1RL-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for C1RL-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C1RL-AS1 Gene

Publications for C1RL-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 67
  2. The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PMID: 12975309) Clark H.F. … Gray A.M. (Genome Res. 2003) 3

Products for C1RL-AS1 Gene

Sources for C1RL-AS1 Gene