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Aliases for C1QTNF7 Gene

Aliases for C1QTNF7 Gene

  • C1q And Tumor Necrosis Factor Related Protein 7 2 3
  • CTRP7 3 4
  • Complement C1q Tumor Necrosis Factor-Related Protein 7 3
  • Complement-C1q Tumor Necrosis Factor-Related Protein 7 3
  • ZACRP7 3

External Ids for C1QTNF7 Gene

Previous GeneCards Identifiers for C1QTNF7 Gene

  • GC04P015156
  • GC04P015029
  • GC04P015092
  • GC04P015017
  • GC04P014691

Summaries for C1QTNF7 Gene

GeneCards Summary for C1QTNF7 Gene

C1QTNF7 (C1q And Tumor Necrosis Factor Related Protein 7) is a Protein Coding gene. An important paralog of this gene is COL8A1.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C1QTNF7 Gene

Genomics for C1QTNF7 Gene

Regulatory Elements for C1QTNF7 Gene

Genomic Location for C1QTNF7 Gene

Start:
15,339,818 bp from pter
End:
15,446,167 bp from pter
Size:
106,350 bases
Orientation:
Plus strand

Genomic View for C1QTNF7 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C1QTNF7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C1QTNF7 Gene

Proteins for C1QTNF7 Gene

  • Protein details for C1QTNF7 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9BXJ2-C1QT7_HUMAN
    Recommended name:
    Complement C1q tumor necrosis factor-related protein 7
    Protein Accession:
    Q9BXJ2
    Secondary Accessions:
    • B2RBT3
    • J3KPW3

    Protein attributes for C1QTNF7 Gene

    Size:
    289 amino acids
    Molecular mass:
    30683 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for C1QTNF7 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for C1QTNF7 Gene

Proteomics data for C1QTNF7 Gene at MOPED

Post-translational modifications for C1QTNF7 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C1QTNF7 Gene

No data available for DME Specific Peptides for C1QTNF7 Gene

Domains for C1QTNF7 Gene

Protein Domains for C1QTNF7 Gene

Suggested Antigen Peptide Sequences for C1QTNF7 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9BXJ2

UniProtKB/Swiss-Prot:

C1QT7_HUMAN :
  • Q9BXJ2
Domain:
  • Contains 1 C1q domain.
  • Contains 1 collagen-like domain.
genes like me logo Genes that share domains with C1QTNF7: view

No data available for Gene Families for C1QTNF7 Gene

Function for C1QTNF7 Gene

Gene Ontology (GO) - Molecular Function for C1QTNF7 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding --
genes like me logo Genes that share ontologies with C1QTNF7: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C1QTNF7 Gene

Localization for C1QTNF7 Gene

Subcellular locations from UniProtKB/Swiss-Prot for C1QTNF7 Gene

Secreted.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C1QTNF7 Gene COMPARTMENTS Subcellular localization image for C1QTNF7 gene
Compartment Confidence
extracellular 3
endoplasmic reticulum 1
lysosome 1
mitochondrion 1

Gene Ontology (GO) - Cellular Components for C1QTNF7 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005581 collagen trimer IEA --
GO:0005615 extracellular space IEA --
genes like me logo Genes that share ontologies with C1QTNF7: view

Pathways for C1QTNF7 Gene

SuperPathways for C1QTNF7 Gene

No Data Available

Interacting Proteins for C1QTNF7 Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000295297%0d%0a9606.ENSP00000358081%0d%0a
Selected Interacting proteins: ENSP00000295297 for C1QTNF7 Gene via STRING

Symbol External ID(s) Details
BAG3

Gene Ontology (GO) - Biological Process for C1QTNF7 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0051260 protein homooligomerization IEA --
genes like me logo Genes that share ontologies with C1QTNF7: view

No data available for Pathways by source for C1QTNF7 Gene

Transcripts for C1QTNF7 Gene

Unigene Clusters for C1QTNF7 Gene

C1q and tumor necrosis factor related protein 7:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C1QTNF7 Gene

ExUns: 1 ^ 2a · 2b · 2c · 2d ^ 3 ^ 4 ^ 5 ^ 6 ^ 7a · 7b ^ 8a · 8b · 8c · 8d
SP1: - - - - - - -
SP2: - - - -
SP3: - - -
SP4: - -
SP5:
SP6:

Relevant External Links for C1QTNF7 Gene

GeneLoc Exon Structure for
C1QTNF7
ECgene alternative splicing isoforms for
C1QTNF7

Expression for C1QTNF7 Gene

mRNA expression in normal human tissues for C1QTNF7 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for C1QTNF7 Gene

This gene is overexpressed in Artery - Tibial (5.6).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for C1QTNF7 Gene

SOURCE GeneReport for Unigene cluster for C1QTNF7 Gene Hs.153714

genes like me logo Genes that share expressions with C1QTNF7: view

No data available for mRNA Expression by UniProt/SwissProt for C1QTNF7 Gene

Orthologs for C1QTNF7 Gene

This gene was present in the common ancestor of chordates.

Orthologs for C1QTNF7 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C1QTNF7 35
  • 99.77 (n)
  • 100 (a)
C1QTNF7 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia C1QTNF7 35
  • 91.93 (n)
  • 97.23 (a)
C1QTNF7 36
  • 98 (a)
OneToOne
dog
(Canis familiaris)
Mammalia C1QTNF7 35
  • 92.45 (n)
  • 95.95 (a)
C1QTNF7 36
  • 97 (a)
OneToOne
mouse
(Mus musculus)
Mammalia C1qtnf7 35
  • 87.95 (n)
  • 95.95 (a)
C1qtnf7 16
C1qtnf7 36
  • 96 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia C1QTNF7 36
  • 85 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia C1qtnf7 35
  • 89.39 (n)
  • 96.89 (a)
chicken
(Gallus gallus)
Aves C1QTNF7 35
  • 80.16 (n)
  • 86.85 (a)
C1QTNF7 36
  • 87 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia C1QTNF7 36
  • 81 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia c1qtnf7 35
  • 73.08 (n)
  • 79.02 (a)
zebrafish
(Danio rerio)
Actinopterygii CABZ01048675.1 36
  • 67 (a)
OneToOne
LOC564609 35
  • 64.79 (n)
  • 66.9 (a)
Species with no ortholog for C1QTNF7:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for C1QTNF7 Gene

ENSEMBL:
Gene Tree for C1QTNF7 (if available)
TreeFam:
Gene Tree for C1QTNF7 (if available)

Paralogs for C1QTNF7 Gene

Selected SIMAP similar genes for C1QTNF7 Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with C1QTNF7: view

Variants for C1QTNF7 Gene

Sequence variations from dbSNP and Humsavar for C1QTNF7 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type MAF
rs733388 -- 15,406,765(+) ATATA(A/G/T)AGTAA intron-variant
rs765747 -- 15,391,936(+) GGTCT(C/T)ATGAA intron-variant
rs765748 -- 15,391,946(+) ATACA(C/G)ACAGG intron-variant
rs768031 -- 15,443,409(-) CACTA(G/T)CCCAT utr-variant-3-prime
rs768032 -- 15,443,448(-) CTGCT(C/T)ATCAC utr-variant-3-prime

Structural Variations from Database of Genomic Variants (DGV) for C1QTNF7 Gene

Variant ID Type Subtype PubMed ID
esv2623009 CNV Insertion 19546169
dgv1586e1 CNV Complex 17122850

Relevant External Links for C1QTNF7 Gene

HapMap Linkage Disequilibrium report
C1QTNF7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C1QTNF7 Gene

Disorders for C1QTNF7 Gene

(1) University of Copenhagen DISEASES for C1QTNF7 Gene

Relevant External Links for C1QTNF7

Genetic Association Database (GAD)
C1QTNF7
Human Genome Epidemiology (HuGE) Navigator
C1QTNF7
genes like me logo Genes that share disorders with C1QTNF7: view

No data available for UniProtKB/Swiss-Prot for C1QTNF7 Gene

Publications for C1QTNF7 Gene

  1. Risk of non-Hodgkin lymphoma in association with germline variation in complement genes. (PMID: 19344414) Cerhan J.R. … Slager S.L. (Br. J. Haematol. 2009) 3 48
  2. Genome-wide association study of conduct disorder symptomatology. (PMID: 20585324) Dick D.M. … Bierut L. (Mol. Psychiatry 2011) 3 48
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for C1QTNF7 Gene

Sources for C1QTNF7 Gene

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