C1QBP Gene
protein-coding GIFtS : 61
GCID: GC17 M005336
complement component 1, q subcomponent binding protein (Previous symbol: HABP1 )
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Aliasesfor C1QBP gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Complement Component 1, Q Subcomponent Binding Protein 1 2 GC1QBP2 3 HABP11 2 3 5 ASF/SF2-Associated Protein P322 3 SF2p321 2 P331 GC1Q-R1 C1q Globular Domain-Binding Protein2 GC1qR1 Complement Component 1 Q Subcomponent-Binding Protein, Mitochondrial2 P321 Splicing Factor SF2-Associated Protein2 Glycoprotein GC1qBP2 3 C1qBP3 Hyaluronan-Binding Protein 12 3 SF2P323 Mitochondrial Matrix Protein P322 3 GC1q-R Protein3
Export aliases for C1QBP gene to outside databases Previous GC identifers: GC17M005721 GC17M005675 GC17M005280 GC17M005536 GC17M005276 GC17M005226
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Summariesfor C1QBP gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for C1QBP : The human complement subcomponent C1q associates with C1r and C1s in order to yield the first component of the serum complement system. The protein encoded by this gene is known to bind to the globular heads of C1q molecules and inhibit C1 activation. This protein has also been identified as the p32 subunit of pre-mRNA splicing factor SF2, as well as a hyaluronic acid-binding protein. (provided by RefSeq, Jul 2008) UniProtKB/Swiss-Prot: C1QBP_HUMAN, Q07021 Function : Is believed to be a multifunctional and multicompartmental protein involved in inflammation and infectionprocesses, ribosome biogenesis, regulation of apoptosis, transcriptional regulation and pre-mRNA splicing. At the cell surface is thought to act as an endothelial receptor for plasma proteins of the complement and kallikrein-kinin cascades. Putative receptor for C1q; specifically binds to the globular "heads" of C1q thus inhibiting C1; may perform the receptor function through a complex with C1qR/CD93. In complex with cytokeratin-1/KRT1 is a high affinty receptor for kininogen-1/HMWK. Can also bind other plasma proteins, such as coagulation factor XII leading to its autoactivation. May function to bind initially fluid kininogen-1 to the cell membrane. The secreted form may enhance both extrinsic and intrinsic coagulation pathways. It is postulated that the cell surface form requires docking with transmembrane proteins for downstream signaling which might be specific for a cell-type or response. By acting as C1q receptor is involved in chemotaxis of immature dendritic cells and neutrophils and is proposed to signal through CD209/DC-SIGN on immature dendritic cells, through integrin alpha-4/beta-1 during trophoblast invasion of the decidua, and through integrin beta-1 during endothelial cell adhesion and spreading. Signaling involved in inhibition of innate immune response is implicating the PI3K-AKT/PKB pathway. In mitochondrial translation may be involved in formation of functional 55S mitoribosomes; the function seems to involve its RNA-binding activity. May be involved in the nucleolar ribosome maturation process; the function may involve the exchange of FBL for RRP1 in the association with pre-ribosome particles. Involved in regulation of RNA splicing by inhibiting the RNA-binding capacity of SRSF1 and its phosphorylation. Is required for the nuclear translocation of splicing factor U2AF1L4. Involved in regulation of CDKN2A- and HRK-mediated apoptosis. Stabilizes mitochondrial CDKN2A isoform smARF. May be involved in regulation of FOXC1 transcriptional activity and NFY/CCAAT-binding factor complex-mediated transcription. In infection processes acts as an attachment site for microbial proteins, including Listeria monocytogenes internalin B and Staphylococcus aureus protein A. May play a role in antibacterial defense as it can bind to cell surface hyaluronan and inhibit Streptococcus pneumoniae hyaluronate lyase. Involved in replication of Rubella virus. May be involved in modulation of the immune response; ligation by HCV core protein is resulting in suppresion of interleukin-12 production in monocyte-derived dendritic cells. Involved in regulation of antiviral response by inhibiting DDX58- and IFIH1-mediated signaling pathways probably involving its association with MAVS after viral infection. Involved in HIV-1 replication, presumably by contributing to splicing of viral RNA Gene Wiki entry for C1QBP
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Genomic Viewsfor C1QBP gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000017.10 NC_018928.1 NT_010718.16 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the C1QBP gene promoter: SRF E2F-4 E2F-3a E2F-5 E2F-1 E2F SRF (504 AA) E2F-2 Other transcription factors Search SABiosciences Chromatin IP Primers for C1QBP Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat C1QBP
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 17p13.3 Ensembl cytogenetic band: 17p13.2 HGNC cytogenetic band: 17p13.3 C1QBP Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 17 GeneLoc Exon Structure
GeneLoc location for GC17M005336: view genomic region
(about GC identifiers )
Start:
5,336,097 bp from pter
End:
5,352,150 bp from pter
Size:
16,054 bases
Orientation:
minus strand
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Proteinsfor C1QBP gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: C1QBP_HUMAN, Q07021 (See
protein sequence )Recommended Name: Complement component 1 Q subcomponent-binding protein, mitochondrial precursor Size : 282 amino acids; 31362 Da
Subunit : Homotrimer; three monomers form a donut-shaped structure with an unusually asymmetric charge distribution onthe surface. Interacts with CDK13, HRK, VTN, NFYB, ADRA1B, FOXC1, DDX21, DDX50, NCL, SRSF1, SRSF9 and CDKN2A isoform smARF. Interacts with CD93; the association may represent a cell surface C1q receptor. Interacts with KRT1; the association represents a cell surface kininogen receptor. Interacts with CD209; the interaction is indicative for a C1q:C1QBP:CD209 signaling complex. Interacts with FBL and RRP1; the respective interactions with C1QBP are competetive. Probably associates with the mitoribosome. Interacts with MAVS; the interaction occurs upon viral tansfection. Interacts with PPIF. Interacts with Rubella virus capsid protein; the interaction occurs in mitochondria. Interacts with Rubella virus protease p150, Staphylococcus aureus protein A/spa, HIV-1 Tat and HCV core protein
Subcellular location : Mitochondrion matrix. Nucleus. Cell membrane; Peripheral membrane protein; Extracellular side.Secreted. Cytoplasm. Nucleus, nucleolus. Note=Seems to be predominantly localized to mitochondria. Secreted by activated lymphocytes
Caution : The subcellular location has been matter of debate. After being reported to be exclusively localized tomitochondria, demonstrations of promiscuous associations and locations have been rather considered as artifactual due to the extremely acidic character and the use of different tagged versions of the protein (PubMed:9305894, PubMed:11493647). However, by now the location to multiple compartments linked to diverse functions is accepted. The N-termini of the surface and secreted forms are identical to the reported processed mitochonddrial form
2 PDB 3D structures from and Proteopedia for C1QBP :1P32 (3D)
  3RPX (3D)
 
Secondary accessions : Q2HXR8 Q9NNY8Explore the universe of human proteins at neXtProt for C1QBP: NX_Q07021 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_Q07021 C1QBP Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins: NP_001203.1 ENSEMBL proteins: ENSP00000225698 ENSP00000460308 ENSP00000460638 ENSP00000458624 Reactome Protein details: Q07021 Human Recombinant Protein Products: Gene Ontology (GO): 5/10 cellular component terms (GO ID links to tree view) (see all 10 ): About this table
C1QBP for ontologies About GeneDecksing C1QBP Antibody Products: Assay Products for C1QBP:
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Protein
Domains / Familiesfor C1QBP gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
C1QBP for domains About GeneDecksing 1 InterPro domain/family :
Graphical View of Domain Structure for InterPro Entry Q07021 ProtoNet protein and cluster: Q07021
1 Blocks protein family : IPB003428 Mitochondrial glycoprotein UniProtKB/Swiss-Prot: C1QBP_HUMAN, Q07021 Similarity : Belongs to the MAM33 family
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Functionfor C1QBP gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: C1QBP_HUMAN, Q07021 Function : Is believed to be a multifunctional and multicompartmental protein involved in inflammation and infectionprocesses, ribosome biogenesis, regulation of apoptosis, transcriptional regulation and pre-mRNA splicing. At the cell surface is thought to act as an endothelial receptor for plasma proteins of the complement and kallikrein-kinin cascades. Putative receptor for C1q; specifically binds to the globular "heads" of C1q thus inhibiting C1; may perform the receptor function through a complex with C1qR/CD93. In complex with cytokeratin-1/KRT1 is a high affinty receptor for kininogen-1/HMWK. Can also bind other plasma proteins, such as coagulation factor XII leading to its autoactivation. May function to bind initially fluid kininogen-1 to the cell membrane. The secreted form may enhance both extrinsic and intrinsic coagulation pathways. It is postulated that the cell surface form requires docking with transmembrane proteins for downstream signaling which might be specific for a cell-type or response. By acting as C1q receptor is involved in chemotaxis of immature dendritic cells and neutrophils and is proposed to signal through CD209/DC-SIGN on immature dendritic cells, through integrin alpha-4/beta-1 during trophoblast invasion of the decidua, and through integrin beta-1 during endothelial cell adhesion and spreading. Signaling involved in inhibition of innate immune response is implicating the PI3K-AKT/PKB pathway. In mitochondrial translation may be involved in formation of functional 55S mitoribosomes; the function seems to involve its RNA-binding activity. May be involved in the nucleolar ribosome maturation process; the function may involve the exchange of FBL for RRP1 in the association with pre-ribosome particles. Involved in regulation of RNA splicing by inhibiting the RNA-binding capacity of SRSF1 and its phosphorylation. Is required for the nuclear translocation of splicing factor U2AF1L4. Involved in regulation of CDKN2A- and HRK-mediated apoptosis. Stabilizes mitochondrial CDKN2A isoform smARF. May be involved in regulation of FOXC1 transcriptional activity and NFY/CCAAT-binding factor complex-mediated transcription. In infection processes acts as an attachment site for microbial proteins, including Listeria monocytogenes internalin B and Staphylococcus aureus protein A. May play a role in antibacterial defense as it can bind to cell surface hyaluronan and inhibit Streptococcus pneumoniae hyaluronate lyase. Involved in replication of Rubella virus. May be involved in modulation of the immune response; ligation by HCV core protein is resulting in suppresion of interleukin-12 production in monocyte-derived dendritic cells. Involved in regulation of antiviral response by inhibiting DDX58- and IFIH1-mediated signaling pathways probably involving its association with MAVS after viral infection. Involved in HIV-1 replication, presumably by contributing to splicing of viral RNA Induction : Enhanced cell surface expression upon platelet and monocyte activation
Genatlas biochemistry entry for C1QBP : multifunctional protein,C1q globular binding protein,33kDa,cell surface hyaluronic acid-binding protein 1,hyaladherin family,pre-mRNA splicing factor SP2 p32 subunit,localized predominantly in mitochondrial matrix,putatively involved in nucleus-mitochondrion interactions,see C1Q@ Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for C1QBP (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for C1QBPOriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: C1QBP (NM_001212 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for C1QBP Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat C1QBP
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for C1QBP
Gene Ontology (GO): 5/10 molecular function terms (GO ID links to tree view) (see all 10 ): About this table
C1QBP for ontologies About GeneDecksing Animal Models: 4 MGI mutant phenotypes (inferred from 1 allele ) (MGI details for C1qbp) :
C1QBP for phenotypes About GeneDecksing
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Pathways & Interactionsfor C1QBP gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways   About this table See pathways by source Super-pathway contained gene-specific pathways 1 Formation of Fibrin Clot (Clotting Cascade) 2 Lymphocyte Signaling 3 Glucose / Energy Metabolism 4 Platelet activation, signaling and aggregation 5 CCR3 Pathway in Eosinophils
Pathway sources See GeneCards unified pathways Show all pathways 1 Downloadable PowerPoint Slide of QIAGEN Pathway Central Maps for C1QBP 2
Cell Signaling Technology (CST) Pathways for C1QBP 3
Reactome Pathways for C1QBP
C1QBP for pathways About GeneDecksing Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for C1QBP STRING Interaction
Network Preview (showing 5 interactants - click image to see 25)5/417 Interacting proteins for C1QBP (Q07021 1 , 2 , 3 ENSP00000225698 4 ) via UniProtKB, MINT, STRING , and/or I2D (see all 417 )Interactant Interaction Details GeneCard External ID(s) HABP4 Q5JVS0 2 , 3 , ENSP00000364398 4 MINT-7041074 I2D:
score=3 STRING: ENSP00000364398 PRKD1 Q15139 1 , 3 , ENSP00000333568 4 EBI-347528,EBI-1181072 I2D:
score=3 STRING: ENSP00000333568 YWHAG P61981 2 , 3 , ENSP00000306330 4 MINT-50804 I2D:
score=3 STRING: ENSP00000306330 FBXO33 Q7Z6M2 2 , 3 , ENSP00000298097 4 MINT-2831634 I2D:
score=1 STRING: ENSP00000298097 IKBKB O14920 2 , 3 MINT-48074 I2D:
score=2
About this table Gene Ontology (GO): 5/29 biological process terms (GO ID links to tree view) (see all 29 ): About this table
C1QBP for ontologies About GeneDecksing
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Drugs & Compoundsfor C1QBP gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section
C1QBP for compounds About GeneDecksing Browse Tocris compounds for C1QBP 10/11 Novoseek chemical compound relationships for C1QBP gene (see all 11 ) About this table
Compound
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
kininogen
90.6
21
15467913 (2), 10596854 (1), 10614982 (1), 11204562 (1) (see all 18 )
sulfosuccinimidyl 6-(biotinamido)hexanoate
74.6
3
11414365 (1), 9777408 (1)
biotin
36.7
5
11414365 (1), 9777408 (1), 14691569 (1)
zinc
32.1
15
12213329 (5), 8710908 (2), 10596854 (1), 11307009 (1) (see all 5 )
mannose
25.1
5
7706463 (1), 11784324 (1), 11568477 (1)
heparan sulfate
18
3
15060982 (1), 14629481 (1)
glutaraldehyde
15
2
9777408 (1), 11784324 (1)
fibrinogen
6.94
15
10075865 (8)
calcium
0
1
7706463 (1)
gold
0
2
11083468 (1)
Search CenterWatch for drugs/clinical trials and news about C1QBP
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Transcriptsfor C1QBP gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for C1QBP gene: NM_001212.3 Unigene Cluster for C1QBP:
Complement component 1, q subcomponent binding protein Hs.555866 [show with all ESTs ] Unigene Representative Sequence: BF972145 7 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000225698 (uc002gby.1 ) ENST00000574444 ENST00000570805 ENST00000573204 ENST00000573421 ENST00000573406 ENST00000576122 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for C1QBP (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for C1QBPOriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: C1QBP (NM_001212 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for C1QBP Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat C1QBP
Additional cDNA sequence: AF275902.1 AJ297362.1 AK291516.1 BC000435.2 BC013731.1 BT019898.1 BT019899.1 L04636.1 X75913.1
24/33 DOTS entries (see all 33 ): DT.95085802 DT.100880016
DT.219474 DT.100880034 DT.100880026 DT.100880014 DT.120977882 DT.95085780 DT.120977766 DT.95085777 DT.100039340 DT.100880025 DT.100880029 DT.100880035 DT.100880037 DT.97864145 DT.100880015 DT.100880019 DT.101985486 DT.120977769 DT.92460853 DT.95085723 DT.95085776 DT.95085778 24/690 AceView cDNA sequences (see all 690 ):
BM708688 BM754610 CR610424 CB149420 CR590289 NM_001212 BQ688094 BQ924861 BU628610 R64407 BQ690524 X75913 BX440166 AA954623 BM712283 CR608216 BP353021 BM423854 BG742615 BQ651415 CR591881 AI304534 AA680089 BM449955 GeneLoc Exon Structure 5/6 Alternative Splicing Database (ASD) splice patterns (SP) for C1QBP (see all 6 ) About this scheme ExUns: 1a · 1b · 1c ^ 2a · 2b · 2c ^ 3a · 3b ^ 4a · 4b · 4c ^ 5 ^ 6 ^ 7a · 7b · 7c SP1 :       -   -   -           -             SP2 :           -           -             SP3 :       -   -   -           -   -           SP4 :       -   -   -       -     -             SP5 :       -   -   -                      
ECgene alternative splicing isoforms for C1QBP
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Expression for C1QBP gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section C1QBP expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: ATAGACATAA
About this image C1QBP expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table See C1QBP Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for C1QBP SOURCE GeneReport for Unigene cluster: Hs.555866 UniProtKB/Swiss-Prot: C1QBP_HUMAN, Q07021 Tissue specificity : Expressed on cell surface of peripheral blood cells (at protein level); Surface expression isreported for macrophages and monocyte-derived dendritic cells SABiosciences Custom PCR Arrays for C1QBP Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for C1QBPBrowse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat C1QBP QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat C1QBP QIAGEN QuantiFast Probe-based Assays in human , mouse , rat C1QBP In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for C1QBP
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Orthologsfor C1QBP gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of animals.
Orthologs for C1QBP gene from 7/21 species (see all 21 ) About this table
Organism
Taxonomic classification
Gene
Description
Human Similarity
Orthology Type
Details
mouse (Mus musculus)
Mammalia
C1qbp1 , 5
complement component 1, q subcomponent binding protein1, 5
84.83(n) 1 86.74(a) 1
 
11 (43.21 cM) 5 12261 1 NM_007573.2 1 NP_031599.2 1 70977836 5
chicken (Gallus gallus)
Aves
C1QBP1
complement component 1, q subcomponent binding protein
72.96(n) 79.72(a)
 
395538 XM_415748.3 XP_415748.3
lizard (Anolis carolinensis)
Reptilia
C1QBP6
--
65(a)
1 ↔ 1
GL344715.1(15096-19248)
African clawed frog (Xenopus laevis)
Amphibia
LOC3984322
similar to complement component 1, q subcomponent binding more
76.22(n)
 
BC056846.1
zebrafish (Danio rerio)
Actinopterygii
sbcb7852
sbcb785
75.92(n)
 
378739 57088855
fruit fly (Drosophila melanogaster)
Insecta
CG64591
CG6459
52.59(n) 40.78(a)
 
37006 NM_137399.3 NP_611243.1
worm (Caenorhabditis elegans)
Secernentea
cri-31
Protein CRI-3
40.54(n) 28.11(a)
 
175441 NM_065300.3 NP_497701.1
ENSEMBL Gene Tree for C1QBP (if available)TreeFam Gene Tree for C1QBP (if available)
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Paralogsfor C1QBP gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for C1QBP gene
C1QBP for paralogs About GeneDecksing 3 Pseudogenes.org Pseudogenes for C1QBP PGOHUM00000242332 PGOHUM00000247078 PGOHUM00000239044
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Genomic Variantsfor C1QBP gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 17 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for C1QBP (5336097 - 5352150 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for C1QBP: --
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing C1QBP
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Disorders
/ Diseasesfor C1QBP gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database , Novoseek ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
C1QBP for disorders About GeneDecksing
OMIM gene information: 601269
OMIM disorders : --20/24 diseases for C1QBP (see all 24 ): About MalaCards ceroid lipofuscinosis neuronal ceroid-lipofuscinosis metastasis efficiency chikungunya hepatitis c endocarditis cryoglobulinemia rubella thrombosis cervical cancer alzheimer's disease cervicitis hepatitis meningioma immunodeficiency breast cancer ataxia pneumonia neuronitis melanoma 2 diseases from the University of Copenhagen DISEASES database for C1QBP :Neuronal ceroid lipofuscinosis Cancer 10 Novoseek disease relationships for C1QBP gene About this table
Disease
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
hepatitis c
39
4
15163734 (2), 16306613 (1), 11673541 (1)
inflammation
8.06
12
15234555 (2), 16893067 (2), 15467913 (2), 12574814 (1) (see all 5 )
endocarditis
6.35
1
17544818 (1)
virus infection
5.64
1
11318594 (1)
cancer
5.22
3
18757437 (1)
necrosis
0
2
11810192 (1)
thrombosis
0
7
15234555 (2), 12574814 (1), 10722602 (1)
atherosclerosis
0
3
15234555 (1), 16893067 (1)
tumors
0
28
18757437 (4), 19565630 (2), 12220632 (1), 11773076 (1) (see all 6 )
immunodeficiency
0
4
9305894 (2), 8189522 (1), 8626563 (1)
Human Genome Epidemiology (HuGE) Navigator: C1QBP (8 documents) Export disorders for C1QBP gene to outside databases
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Publicationsfor C1QBP gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for C1QBP gene, integrated from 9 sources (see all 196 ): (articles sorted by number of sources associating them with C1QBP) Utopia : connect your pdf to the dynamic world of online information
Molecular cloning of human fibroblast hyaluronic acid-binding protein confirms its identity with P-32, a protein co-purified with splicing factor SF2. Hyaluronic acid-binding protein as P-32 protein, co- purified with splicing factor SF2. (PubMed id 8567680) 1 , 2 , 3, 9 Deb T.B. and Datta K. (1996) Isolation, cDNA cloning, and overexpression of a 33-kD cell surface glycoprotein that binds to the globular 'heads' of C1q. (PubMed id 8195709) 1 , 2 , 3 Ghebrehiwet B.... Reid K.B. (1994) Inhibition of RIG-I and MDA5-dependent antiviral response by gC1qR at mitochondria. (PubMed id 19164550) 1 , 2 , 9 Xu L....Gu J. (2009) Human p32, interacts with B subunit of the CCAAT-binding factor, CBF/NF-Y, and inhibits CBF-mediated transcription activation in vitro. (PubMed id 15243141) 1 , 2 , 9 Chattopadhyay C....Maity S.N. (2004) Activation-dependent surface expression of gC1qR/p33 on human blood platelets. (PubMed id 12574814) 1 , 2 , 9 Peerschke E.I....Ghebrehiwet B. (2003) The splicing factor-associated protein, p32, regulates RNA splicing by inhibiting ASF/SF2 RNA binding and phosphorylation. (PubMed id 10022843) 1 , 2 , 9 Petersen-Mahrt S.K....Akusjarvi G. (1999) Crystal structure of human p32, a doughnut-shaped acidic mitochondrial matrix protein. (PubMed id 10097078) 1 , 2 , 9 Jiang J.... Xu R.-M. (1999) Evidence for inhibitory interaction of hyaluronan-binding protein 1 (HABP1/p32/gC1qR) with Streptococcus pneumoniae hyaluronidase. (PubMed id 19004836) 1 , 2 , 9 Yadav G....Datta K. (2009) HCV core protein interaction with gC1q receptor inhibits Th1 differentiation of CD4+ T cells via suppression of dendritic cell IL-12 production. (PubMed id 17881511) 1 , 2 , 9 Waggoner S.N....Hahn Y.S. (2007) gC1q receptor ligation selectively down-regulates human IL-12 production through activation of the phosphoinositide 3-kinase pathway. (PubMed id 16177118) 1 , 2 , 9 Waggoner S.N....Hahn Y.S. (2005)
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External Searches for C1QBP gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing C1QBP gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing C1QBP gene
(According to HUGE )
About This Section --
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Specialized Databases showing C1QBP gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for C1QBP Pharmacogenomics, SNPs, Pathways SeattleSNPs http://pga.gs.washington.edu/data/c1qbp/
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About This Section Patent Information for C1QBP gene: Search GeneIP for patents involving C1QBP GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor C1QBP gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
OriGene Antibodies for C1QBP OriGene shRNA RFP for C1QBP OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for C1QBP OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for C1QBP Browse OriGene Protein Over-expression Lysates Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for C1QBP OriGene 3'-UTR Clone for C1QBP OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for C1QBP OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for C1QBP Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs Browse OriGene full length recombinant human proteins expressed in human HEK293 cells OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for C1QBP OriGene Custom Protein Services for C1QBP OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat C1QBP QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing C1QBP QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat C1QBP QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat C1QBP QIAGEN QuantiFast Probe-based Assays in human , mouse , rat C1QBP QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat C1QBP
Antibodies & Assays for C1QBP  
Search Tocris compounds for C1QBP
Recombinant Protein for C1QBP
C1QBP Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for C1QBP
ThermoFisher Antibodies for C1QBP
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat C1QBP
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