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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

C1QBP Gene

protein-coding   GIFtS: 61
GCID: GC17M005336

complement component 1, q subcomponent binding protein


(Previous symbol: HABP1)
 Explore 24 diseases affiliated with
C1QBP via our new
 Human Malady Compendium 
Biological research products
for C1QBP
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Complement Component 1, Q Subcomponent Binding Protein1 2     GC1QBP2 3
HABP11 2 3 5     ASF/SF2-Associated Protein P322 3
SF2p321 2     P331
GC1Q-R1     C1q Globular Domain-Binding Protein2
GC1qR1     Complement Component 1 Q Subcomponent-Binding Protein, Mitochondrial2
P321     Splicing Factor SF2-Associated Protein2
Glycoprotein GC1qBP2 3     C1qBP3
Hyaluronan-Binding Protein 12 3     SF2P323
Mitochondrial Matrix Protein P322 3     GC1q-R Protein3

External Ids:    HGNC: 12431   Entrez Gene: 7082   Ensembl: ENSG000001085617   OMIM: 6012695   UniProtKB: Q070213   

Export aliases for C1QBP gene to outside databases

Previous GC identifers: GC17M005721 GC17M005675 GC17M005280 GC17M005536 GC17M005276 GC17M005226


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for C1QBP:
The human complement subcomponent C1q associates with C1r and C1s in order to yield the first component of the serum
complement system. The protein encoded by this gene is known to bind to the globular heads of C1q molecules and
inhibit C1 activation. This protein has also been identified as the p32 subunit of pre-mRNA splicing factor SF2, as
well as a hyaluronic acid-binding protein. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: C1QBP_HUMAN, Q07021
Function: Is believed to be a multifunctional and multicompartmental protein involved in inflammation and infection
processes, ribosome biogenesis, regulation of apoptosis, transcriptional regulation and pre-mRNA splicing. At the cell
surface is thought to act as an endothelial receptor for plasma proteins of the complement and kallikrein-kinin
cascades. Putative receptor for C1q; specifically binds to the globular "heads" of C1q thus inhibiting C1; may perform
the receptor function through a complex with C1qR/CD93. In complex with cytokeratin-1/KRT1 is a high affinty receptor
for kininogen-1/HMWK. Can also bind other plasma proteins, such as coagulation factor XII leading to its
autoactivation. May function to bind initially fluid kininogen-1 to the cell membrane. The secreted form may enhance
both extrinsic and intrinsic coagulation pathways. It is postulated that the cell surface form requires docking with
transmembrane proteins for downstream signaling which might be specific for a cell-type or response. By acting as C1q
receptor is involved in chemotaxis of immature dendritic cells and neutrophils and is proposed to signal through
CD209/DC-SIGN on immature dendritic cells, through integrin alpha-4/beta-1 during trophoblast invasion of the decidua,
and through integrin beta-1 during endothelial cell adhesion and spreading. Signaling involved in inhibition of innate
immune response is implicating the PI3K-AKT/PKB pathway. In mitochondrial translation may be involved in formation of
functional 55S mitoribosomes; the function seems to involve its RNA-binding activity. May be involved in the nucleolar
ribosome maturation process; the function may involve the exchange of FBL for RRP1 in the association with
pre-ribosome particles. Involved in regulation of RNA splicing by inhibiting the RNA-binding capacity of SRSF1 and its
phosphorylation. Is required for the nuclear translocation of splicing factor U2AF1L4. Involved in regulation of
CDKN2A- and HRK-mediated apoptosis. Stabilizes mitochondrial CDKN2A isoform smARF. May be involved in regulation of
FOXC1 transcriptional activity and NFY/CCAAT-binding factor complex-mediated transcription. In infection processes
acts as an attachment site for microbial proteins, including Listeria monocytogenes internalin B and Staphylococcus
aureus protein A. May play a role in antibacterial defense as it can bind to cell surface hyaluronan and inhibit
Streptococcus pneumoniae hyaluronate lyase. Involved in replication of Rubella virus. May be involved in modulation of
the immune response; ligation by HCV core protein is resulting in suppresion of interleukin-12 production in
monocyte-derived dendritic cells. Involved in regulation of antiviral response by inhibiting DDX58- and IFIH1-mediated
signaling pathways probably involving its association with MAVS after viral infection. Involved in HIV-1 replication,
presumably by contributing to splicing of viral RNA

Gene Wiki entry for C1QBP


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000017.10  NC_018928.1  NT_010718.16  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the C1QBP gene promoter:
         SRF   E2F-4   E2F-3a   E2F-5   E2F-1   E2F   SRF (504 AA)   E2F-2   
         Other transcription factors

Browse SwitchGear Promoter luciferase reporter plasmids
   Search SABiosciences Chromatin IP Primers for C1QBP

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat C1QBP


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 17p13.3   Ensembl cytogenetic band:  17p13.2   HGNC cytogenetic band: 17p13.3

C1QBP Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
C1QBP gene location

GeneLoc information about chromosome 17         GeneLoc Exon Structure

GeneLoc location for GC17M005336:  view genomic region     (about GC identifiers)

Start:
5,336,097 bp from pter      End:
5,352,150 bp from pter
Size:
16,054 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: C1QBP_HUMAN, Q07021 (See protein sequence)
Recommended Name: Complement component 1 Q subcomponent-binding protein, mitochondrial precursor  
Size: 282 amino acids; 31362 Da
Subunit: Homotrimer; three monomers form a donut-shaped structure with an unusually asymmetric charge distribution on
the surface. Interacts with CDK13, HRK, VTN, NFYB, ADRA1B, FOXC1, DDX21, DDX50, NCL, SRSF1, SRSF9 and CDKN2A isoform
smARF. Interacts with CD93; the association may represent a cell surface C1q receptor. Interacts with KRT1; the
association represents a cell surface kininogen receptor. Interacts with CD209; the interaction is indicative for a
C1q:C1QBP:CD209 signaling complex. Interacts with FBL and RRP1; the respective interactions with C1QBP are
competetive. Probably associates with the mitoribosome. Interacts with MAVS; the interaction occurs upon viral
tansfection. Interacts with PPIF. Interacts with Rubella virus capsid protein; the interaction occurs in mitochondria.
Interacts with Rubella virus protease p150, Staphylococcus aureus protein A/spa, HIV-1 Tat and HCV core protein
Subcellular location: Mitochondrion matrix. Nucleus. Cell membrane; Peripheral membrane protein; Extracellular side.
Secreted. Cytoplasm. Nucleus, nucleolus. Note=Seems to be predominantly localized to mitochondria. Secreted by
activated lymphocytes
Caution: The subcellular location has been matter of debate. After being reported to be exclusively localized to
mitochondria, demonstrations of promiscuous associations and locations have been rather considered as artifactual due
to the extremely acidic character and the use of different tagged versions of the protein (PubMed:9305894,
PubMed:11493647). However, by now the location to multiple compartments linked to diverse functions is accepted. The
N-termini of the surface and secreted forms are identical to the reported processed mitochonddrial form
2 PDB 3D structures from and Proteopedia for C1QBP:
1P32 (3D)        3RPX (3D)    
Secondary accessions: Q2HXR8 Q9NNY8

Explore the universe of human proteins at neXtProt for C1QBP: NX_Q07021

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q07021

  • C1QBP Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_001203.1  
    ENSEMBL proteins: 
     ENSP00000225698   ENSP00000460308   ENSP00000460638   ENSP00000458624  
    Reactome Protein details: Q07021
    Human Recombinant Protein Products: 
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    R&D Systems Recombinant & Natural Proteins for C1QBP (HABP1/C1QBP)
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    Browse OriGene Protein Over-expression Lysates
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    Novus Biologicals C1QBP Proteins
    Novus Biologicals C1QBP Lysates
    Browse Sino Biological Recombinant Proteins
    ProSpec Recombinant Protein for C1QBP
    Uscn Proteins for C1QBP

    Gene Ontology (GO): 5/10 cellular component terms (GO ID links to tree view) (see all 10):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005615extracellular space IEA--
    GO:0005634nucleus IDA15243141
    GO:0005730nucleolus IEA--
    GO:0005737cytoplasm ISS--
    GO:0005739mitochondrion IDA19164550


    C1QBP for ontologies           About GeneDecksing



    C1QBP Antibody Products: 
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    Abcam antibodies for C1QBP 
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    Assay Products for C1QBP: 
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    Uscn ELISAs and CLIAs for C1QBP


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    C1QBP for domains           About GeneDecksing

    1 InterPro domain/family:
     IPR003428 MAM33

    Graphical View of Domain Structure for InterPro Entry Q07021

    ProtoNet protein and cluster: Q07021

    1 Blocks protein family: IPB003428 Mitochondrial glycoprotein

    UniProtKB/Swiss-Prot: C1QBP_HUMAN, Q07021
    Similarity: Belongs to the MAM33 family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: C1QBP_HUMAN, Q07021
    Function: Is believed to be a multifunctional and multicompartmental protein involved in inflammation and infection
    processes, ribosome biogenesis, regulation of apoptosis, transcriptional regulation and pre-mRNA splicing. At the cell
    surface is thought to act as an endothelial receptor for plasma proteins of the complement and kallikrein-kinin
    cascades. Putative receptor for C1q; specifically binds to the globular "heads" of C1q thus inhibiting C1; may perform
    the receptor function through a complex with C1qR/CD93. In complex with cytokeratin-1/KRT1 is a high affinty receptor
    for kininogen-1/HMWK. Can also bind other plasma proteins, such as coagulation factor XII leading to its
    autoactivation. May function to bind initially fluid kininogen-1 to the cell membrane. The secreted form may enhance
    both extrinsic and intrinsic coagulation pathways. It is postulated that the cell surface form requires docking with
    transmembrane proteins for downstream signaling which might be specific for a cell-type or response. By acting as C1q
    receptor is involved in chemotaxis of immature dendritic cells and neutrophils and is proposed to signal through
    CD209/DC-SIGN on immature dendritic cells, through integrin alpha-4/beta-1 during trophoblast invasion of the decidua,
    and through integrin beta-1 during endothelial cell adhesion and spreading. Signaling involved in inhibition of innate
    immune response is implicating the PI3K-AKT/PKB pathway. In mitochondrial translation may be involved in formation of
    functional 55S mitoribosomes; the function seems to involve its RNA-binding activity. May be involved in the nucleolar
    ribosome maturation process; the function may involve the exchange of FBL for RRP1 in the association with
    pre-ribosome particles. Involved in regulation of RNA splicing by inhibiting the RNA-binding capacity of SRSF1 and its
    phosphorylation. Is required for the nuclear translocation of splicing factor U2AF1L4. Involved in regulation of
    CDKN2A- and HRK-mediated apoptosis. Stabilizes mitochondrial CDKN2A isoform smARF. May be involved in regulation of
    FOXC1 transcriptional activity and NFY/CCAAT-binding factor complex-mediated transcription. In infection processes
    acts as an attachment site for microbial proteins, including Listeria monocytogenes internalin B and Staphylococcus
    aureus protein A. May play a role in antibacterial defense as it can bind to cell surface hyaluronan and inhibit
    Streptococcus pneumoniae hyaluronate lyase. Involved in replication of Rubella virus. May be involved in modulation of
    the immune response; ligation by HCV core protein is resulting in suppresion of interleukin-12 production in
    monocyte-derived dendritic cells. Involved in regulation of antiviral response by inhibiting DDX58- and IFIH1-mediated
    signaling pathways probably involving its association with MAVS after viral infection. Involved in HIV-1 replication,
    presumably by contributing to splicing of viral RNA
    Induction: Enhanced cell surface expression upon platelet and monocyte activation

         Genatlas biochemistry entry for C1QBP:
    multifunctional protein,C1q globular binding protein,33kDa,cell surface hyaluronic acid-binding protein 1,hyaladherin
    family,pre-mRNA splicing factor SP2 p32 subunit,localized predominantly in mitochondrial matrix,putatively involved in
    nucleus-mitochondrion interactions,see C1Q@

    miRNA
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    hsa-miR-3926 hsa-miR-330-3p
    SwitchGear 3'UTR luciferase reporter plasmidC1QBP 3' UTR sequence
    Inhib. RNA
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    Gene Editing
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    Clone
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for C1QBP

    Gene Ontology (GO): 5/10 molecular function terms (GO ID links to tree view) (see all 10):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001849complement component C1q binding IDA8195709
    GO:0003714transcription corepressor activity IDA15243141
    GO:0003729mRNA binding ISS--
    GO:0005080protein kinase C binding IEA--
    GO:0005515protein binding IPI--


    C1QBP for ontologies           About GeneDecksing


    Animal Models:
         4 MGI mutant phenotypes (inferred from 1 allele(MGI details for C1qbp):
     behavior/neurological  hematopoietic system  homeostasis/metabolism  immune system 

    C1QBP for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Formation of Fibrin Clot (Clotting Cascade)
    Formation of Fibrin Clot (Clotting Cascade)1.00
    Intrinsic Pathway0.59
    2Lymphocyte Signaling
    Lymphocyte Signaling1.00
    3Glucose / Energy Metabolism
    Glucose / Energy Metabolism1.00
    4Platelet activation, signaling and aggregation
    Hemostasis0.43
    5CCR3 Pathway in Eosinophils
    Internalin Pathway0.19

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 Downloadable PowerPoint Slide of QIAGEN Pathway Central Maps for C1QBP
        Internalin Pathway

    2 Cell Signaling Technology (CST) Pathways for C1QBP
        Lymphocyte Signaling
    Glucose / Energy Metabolism

    3        Reactome Pathways for C1QBP
        Hemostasis
    Formation of Fibrin Clot (Clotting Cascade)
    Intrinsic Pathway



    C1QBP for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for C1QBP

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/417 Interacting proteins for C1QBP (Q070211, 2, 3 ENSP000002256984) via UniProtKB, MINT, STRING, and/or I2D (see all 417)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    HABP4Q5JVS02, 3, ENSP000003643984MINT-7041074 I2D: score=3 STRING: ENSP00000364398
    PRKD1Q151391, 3, ENSP000003335684EBI-347528,EBI-1181072 I2D: score=3 STRING: ENSP00000333568
    YWHAGP619812, 3, ENSP000003063304MINT-50804 I2D: score=3 STRING: ENSP00000306330
    FBXO33Q7Z6M22, 3, ENSP000002980974MINT-2831634 I2D: score=1 STRING: ENSP00000298097
    IKBKBO149202, 3MINT-48074 I2D: score=2 
    About this table

    Gene Ontology (GO): 5/29 biological process terms (GO ID links to tree view) (see all 29):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000122negative regulation of transcription from RNA polymerase II promoter IDA15243141
    GO:0006351transcription, DNA-dependent IEA--
    GO:0006397mRNA processing IEA--
    GO:0006915apoptotic process IEA--
    GO:0006955immune response TAS8195709


    C1QBP for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    C1QBP for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for C1QBP
    10/11 Novoseek chemical compound relationships for C1QBP gene (see all 11)    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    kininogen 90.6 21 15467913 (2), 10596854 (1), 10614982 (1), 11204562 (1) (see all 18)
    sulfosuccinimidyl 6-(biotinamido)hexanoate 74.6 3 11414365 (1), 9777408 (1)
    biotin 36.7 5 11414365 (1), 9777408 (1), 14691569 (1)
    zinc 32.1 15 12213329 (5), 8710908 (2), 10596854 (1), 11307009 (1) (see all 5)
    mannose 25.1 5 7706463 (1), 11784324 (1), 11568477 (1)
    heparan sulfate 18 3 15060982 (1), 14629481 (1)
    glutaraldehyde 15 2 9777408 (1), 11784324 (1)
    fibrinogen 6.94 15 10075865 (8)
    calcium 0 1 7706463 (1)
    gold 0 2 11083468 (1)

    Search CenterWatch for drugs/clinical trials and news about C1QBP 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
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    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for C1QBP gene: 
    NM_001212.3  

    Unigene Cluster for C1QBP:

    Complement component 1, q subcomponent binding protein
    Hs.555866  [show with all ESTs]
    Unigene Representative Sequence: BF972145
    7 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000225698(uc002gby.1) ENST00000574444 ENST00000570805 ENST00000573204
    ENST00000573421 ENST00000573406 ENST00000576122

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    SwitchGear 3'UTR luciferase reporter plasmidC1QBP 3' UTR sequence
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      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat C1QBP
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat C1QBP

    Additional cDNA sequence: 

    AF275902.1 AJ297362.1 AK291516.1 BC000435.2 BC013731.1 BT019898.1 BT019899.1 L04636.1 
    X75913.1 

    24/33 DOTS entries (see all 33):

    DT.95085802  DT.100880016  DT.219474  DT.100880034  DT.100880026  DT.100880014  DT.120977882  DT.95085780 
    DT.120977766  DT.95085777  DT.100039340  DT.100880025  DT.100880029  DT.100880035  DT.100880037  DT.97864145 
    DT.100880015  DT.100880019  DT.101985486  DT.120977769  DT.92460853  DT.95085723  DT.95085776  DT.95085778 

    24/690 AceView cDNA sequences (see all 690):

    BM708688 BM754610 CR610424 CB149420 CR590289 NM_001212 BQ688094 BQ924861 
    BU628610 R64407 BQ690524 X75913 BX440166 AA954623 BM712283 CR608216 
    BP353021 BM423854 BG742615 BQ651415 CR591881 AI304534 AA680089 BM449955 

    GeneLoc Exon Structure

    5/6 Alternative Splicing Database (ASD) splice patterns (SP) for C1QBP (see all 6)    About this scheme

    ExUns: 1a · 1b · 1c ^ 2a · 2b · 2c ^ 3a · 3b ^ 4a · 4b · 4c ^ 5 ^ 6 ^ 7a · 7b · 7c
    SP1:                    -     -     -                             -                                 
    SP2:                                -                             -                                 
    SP3:                    -     -     -                             -     -                           
    SP4:                    -     -     -                 -           -                                 
    SP5:                    -     -     -                                                               


    ECgene alternative splicing isoforms for C1QBP

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    C1QBP expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: ATAGACATAA

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    C1QBP expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    2 LifeMap In Vivo Development Anatomical Compartments/Cells 
    Tissue Anatomical Compartment CellCategory (developmental path)
    KidneyProximal TubuleProximal Tubule CellsKidney
    KidneyProximal TubuleKidney
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See C1QBP Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for C1QBP

    SOURCE GeneReport for Unigene cluster: Hs.555866

    UniProtKB/Swiss-Prot: C1QBP_HUMAN, Q07021
    Tissue specificity: Expressed on cell surface of peripheral blood cells (at protein level); Surface expression is
    reported for macrophages and monocyte-derived dendritic cells

        SABiosciences Custom PCR Arrays for C1QBP
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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for C1QBP gene from 7/21 species (see all 21)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia C1qbp1 , 5 complement component 1, q subcomponent binding protein1, 5 84.83(n)1
    86.74(a)1
      11 (43.21 cM)5
    122611  NM_007573.21  NP_031599.21 
     709778365 
    chicken
    (Gallus gallus)
    Aves C1QBP1 complement component 1, q subcomponent binding protein 72.96(n)
    79.72(a)
      395538  XM_415748.3  XP_415748.3 
    lizard
    (Anolis carolinensis)
    Reptilia C1QBP6
    --
    65(a)
    1 ↔ 1
    GL344715.1(15096-19248)
    African clawed frog
    (Xenopus laevis)
    Amphibia LOC3984322 similar to complement component 1, q subcomponent binding more 76.22(n)    BC056846.1 
    zebrafish
    (Danio rerio)
    Actinopterygii sbcb7852 sbcb785 75.92(n)   378739  57088855 
    fruit fly
    (Drosophila melanogaster)
    Insecta CG64591 CG6459 52.59(n)
    40.78(a)
      37006  NM_137399.3  NP_611243.1 
    worm
    (Caenorhabditis elegans)
    Secernentea cri-31 Protein CRI-3 40.54(n)
    28.11(a)
      175441  NM_065300.3  NP_497701.1 


    ENSEMBL Gene Tree for C1QBP (if available)
    TreeFam Gene Tree for C1QBP (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for C1QBP gene

    C1QBP for paralogs           About GeneDecksing


    3 Pseudogenes.org Pseudogenes for C1QBP
    PGOHUM00000242332 PGOHUM00000247078 PGOHUM00000239044


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/211 NCBI SNPs in C1QBP are shown (see all 211    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 17 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs80723631,2
    C,F,A,H,--5335752(+) CTGGAC/TTCAGG 9 -- int1 ds500124Minor allele frequency- T:0.35NS EA NA CSA WA 2769
    rs2004590181,2
    --5335825(+) TAGAAC/TACAAT 9 -- ds5001 int10--------
    rs1458200111,2
    C,--5335831(+) ACAATG/TTAAGC 9 -- int1 ds50010--------
    rs10503901,2
    C,F,O,A,H,--5336058(+) GTGACG/ACAGGT 9 -- ds5001 ut31 nc-transcript-variantese325Minor allele frequency- A:0.33MN NA NS EA CSA WA 2739
    rs1866212171,2
    --5336081(+) AATAGA/GAAAAG 9 -- ds5001 ut31 nc-transcript-variant0--------
    rs10504561,2
    C,F,A,H,--5336188(+) TGAGAA/GCACAA 9 -- nc-transcript-variantut3112Minor allele frequency- G:0.33NA NS CSA WA EA 584
    rs10504611,2
    C,F,A,--5336210(+) TAAATT/CTGGTA 9 -- ut31 nc-transcript-variant8Minor allele frequency- C:0.28NA NS CSA WA EA 457
    rs413079581,2
    C,F,--5336214(-) AAAAA-/ATACCA 9 -- ut31 nc-transcript-variant2Minor allele frequency- A:0.02NS 94
    rs2002139301,2
    --5336403(+) GGCTGC/TGCTGA 10 T A mis1 ds50010--------
    rs1996683951,2
    --5336429(+) CTGCAA/GAAGTG 10 S F mis1 ds50010--------

    HapMap Linkage Disequilibrium report for C1QBP (5336097 - 5352150 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for C1QBP: --

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    C1QBP for disorders           About GeneDecksing

    OMIM gene information: 601269    OMIM disorders: --

    20/24 diseases for C1QBP (see all 24):    About MalaCards
    ceroid lipofuscinosis    neuronal ceroid-lipofuscinosis    metastasis efficiency    chikungunya
    hepatitis c    endocarditis    cryoglobulinemia    rubella
    thrombosis    cervical cancer    alzheimer's disease    cervicitis
    hepatitis    meningioma    immunodeficiency    breast cancer
    ataxia    pneumonia    neuronitis    melanoma

    2 diseases from the University of Copenhagen DISEASES database for C1QBP:
    Neuronal ceroid lipofuscinosis     Cancer

    10 Novoseek disease relationships for C1QBP gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    hepatitis c 39 4 15163734 (2), 16306613 (1), 11673541 (1)
    inflammation 8.06 12 15234555 (2), 16893067 (2), 15467913 (2), 12574814 (1) (see all 5)
    endocarditis 6.35 1 17544818 (1)
    virus infection 5.64 1 11318594 (1)
    cancer 5.22 3 18757437 (1)
    necrosis 0 2 11810192 (1)
    thrombosis 0 7 15234555 (2), 12574814 (1), 10722602 (1)
    atherosclerosis 0 3 15234555 (1), 16893067 (1)
    tumors 0 28 18757437 (4), 19565630 (2), 12220632 (1), 11773076 (1) (see all 6)
    immunodeficiency 0 4 9305894 (2), 8189522 (1), 8626563 (1)

    Human Genome Epidemiology (HuGE) Navigator: C1QBP (8 documents)

    Export disorders for C1QBP gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for C1QBP gene, integrated from 9 sources (see all 196):
    (articles sorted by number of sources associating them with C1QBP)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Molecular cloning of human fibroblast hyaluronic acid-binding protein confirms its identity with P-32, a protein co-purified with splicing factor SF2. Hyaluronic acid-binding protein as P-32 protein, co- purified with splicing factor SF2. (PubMed id 8567680)1, 2, 3, 9 Deb T.B. and Datta K. (1996)
    2. Isolation, cDNA cloning, and overexpression of a 33-kD cell surface glycoprotein that binds to the globular 'heads' of C1q. (PubMed id 8195709)1, 2, 3 Ghebrehiwet B.... Reid K.B. (1994)
    3. Inhibition of RIG-I and MDA5-dependent antiviral response by gC1qR at mitochondria. (PubMed id 19164550)1, 2, 9 Xu L....Gu J. (2009)
    4. Human p32, interacts with B subunit of the CCAAT-binding factor, CBF/NF-Y, and inhibits CBF-mediated transcription activation in vitro. (PubMed id 15243141)1, 2, 9 Chattopadhyay C....Maity S.N. (2004)
    5. Activation-dependent surface expression of gC1qR/p33 on human blood platelets. (PubMed id 12574814)1, 2, 9 Peerschke E.I....Ghebrehiwet B. (2003)
    6. The splicing factor-associated protein, p32, regulates RNA splicing by inhibiting ASF/SF2 RNA binding and phosphorylation. (PubMed id 10022843)1, 2, 9 Petersen-Mahrt S.K....Akusjarvi G. (1999)
    7. Crystal structure of human p32, a doughnut-shaped acidic mitochondrial matrix protein. (PubMed id 10097078)1, 2, 9 Jiang J.... Xu R.-M. (1999)
    8. Evidence for inhibitory interaction of hyaluronan-binding protein 1 (HABP1/p32/gC1qR) with Streptococcus pneumoniae hyaluronidase. (PubMed id 19004836)1, 2, 9 Yadav G....Datta K. (2009)
    9. HCV core protein interaction with gC1q receptor inhibits Th1 differentiation of CD4+ T cells via suppression of dendritic cell IL-12 production. (PubMed id 17881511)1, 2, 9 Waggoner S.N....Hahn Y.S. (2007)
    10. gC1q receptor ligation selectively down-regulates human IL-12 production through activation of the phosphoinositide 3-kinase pathway. (PubMed id 16177118)1, 2, 9 Waggoner S.N....Hahn Y.S. (2005)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 708 HGNC: 1243 AceView: C1QBPandDHX33 Ensembl:ENSG00000108561 euGenes: HUgn708
    ECgene: C1QBP H-InvDB: C1QBP

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for C1QBP Pharmacogenomics, SNPs, Pathways
    SeattleSNPshttp://pga.gs.washington.edu/data/c1qbp/

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for C1QBP gene:
    Search GeneIP for patents involving C1QBP

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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