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C1GALT1P3 Gene(Pseudogene)

Core 1 Synthase, Glycoprotein-N-Acetylgalactosamine 3-Beta-Galactosyltransferase 1 Pseudogene 3

GCID:
GC08M061910
GIFtS:
8

Aliases for C1GALT1P3 Gene

Aliases for C1GALT1P3 Gene

  • Core 1 Synthase, Glycoprotein-N-Acetylgalactosamine 3-Beta-Galactosyltransferase 1 Pseudogene 3 2 3 5

External Ids for C1GALT1P3 Gene

Previous GeneCards Identifiers for C1GALT1P3 Gene

  • GC00U936371

Summaries for C1GALT1P3 Gene

GeneCards Summary for C1GALT1P3 Gene

C1GALT1P3 (Core 1 Synthase, Glycoprotein-N-Acetylgalactosamine 3-Beta-Galactosyltransferase 1 Pseudogene 3) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C1GALT1P3 Gene

Genomics for C1GALT1P3 Gene

Regulatory Elements for C1GALT1P3 Gene

Enhancers for C1GALT1P3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08G061912 0.7 ENCODE 0.7 -2.4 -2412 1.0 MAX CEBPG RAD21 RFX5 IRF9 GATA3 GATA2 EZH2 NFE2L2 TCF7L2 C1GALT1P3 NARSP2
GH08G061946 0.5 dbSUPER 0.3 -36.4 -36361 2.1 JUND SMARCA4 EED C1GALT1P3 NARSP2
GH08G061980 0.5 ENCODE 0.2 -69.4 -69415 0.1 FOXA2 NRF1 FOXA1 C1GALT1P3 NARSP2
GH08G062010 0.9 FANTOM5 ENCODE 0.1 -100.5 -100545 1.3 JUND JUN CEBPB NR3C1 FOS EP300 MAFK NKAIN3 NARSP2 C1GALT1P3
GH08G062062 0.4 ENCODE 0.1 -152.3 -152315 0.7 CTCF RAD21 NARSP2 C1GALT1P3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around C1GALT1P3 on UCSC Golden Path with GeneCards custom track

Genomic Location for C1GALT1P3 Gene

Chromosome:
8
Start:
61,909,984 bp from pter
End:
61,910,802 bp from pter
Size:
819 bases
Orientation:
Minus strand

Genomic View for C1GALT1P3 Gene

Genes around C1GALT1P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C1GALT1P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C1GALT1P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C1GALT1P3 Gene

Proteins for C1GALT1P3 Gene

Post-translational modifications for C1GALT1P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for C1GALT1P3 Gene

Domains & Families for C1GALT1P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C1GALT1P3 Gene

Function for C1GALT1P3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C1GALT1P3 Gene

Localization for C1GALT1P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for C1GALT1P3 Gene

Pathways & Interactions for C1GALT1P3 Gene

SuperPathways for C1GALT1P3 Gene

No Data Available

Interacting Proteins for C1GALT1P3 Gene

Gene Ontology (GO) - Biological Process for C1GALT1P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for C1GALT1P3 Gene

Drugs & Compounds for C1GALT1P3 Gene

No Compound Related Data Available

Transcripts for C1GALT1P3 Gene

mRNA/cDNA for C1GALT1P3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for C1GALT1P3 Gene

No ASD Table

Relevant External Links for C1GALT1P3 Gene

GeneLoc Exon Structure for
C1GALT1P3
ECgene alternative splicing isoforms for
C1GALT1P3

Expression for C1GALT1P3 Gene

NURSA nuclear receptor signaling pathways regulating expression of C1GALT1P3 Gene:

C1GALT1P3
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for C1GALT1P3 Gene

Orthologs for C1GALT1P3 Gene

Evolution for C1GALT1P3 Gene

ENSEMBL:
Gene Tree for C1GALT1P3 (if available)
TreeFam:
Gene Tree for C1GALT1P3 (if available)

No data available for Orthologs for C1GALT1P3 Gene

Paralogs for C1GALT1P3 Gene

No data available for Paralogs for C1GALT1P3 Gene

Variants for C1GALT1P3 Gene

Relevant External Links for C1GALT1P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
C1GALT1P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for C1GALT1P3 Gene

Disorders for C1GALT1P3 Gene

No disorders were found for C1GALT1P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for C1GALT1P3 Gene

Publications for C1GALT1P3 Gene

No publications were found for C1GALT1P3 Gene.

Products for C1GALT1P3 Gene

Sources for C1GALT1P3 Gene

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