Free for academic non-profit institutions. Other users need a Commercial license

Aliases for C19orf44 Gene

Aliases for C19orf44 Gene

  • Chromosome 19 Open Reading Frame 44 2 3

External Ids for C19orf44 Gene

Summaries for C19orf44 Gene

GeneCards Summary for C19orf44 Gene

C19orf44 (Chromosome 19 Open Reading Frame 44) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C19orf44 Gene

Genomics for C19orf44 Gene

Genomic Location for C19orf44 Gene

Start:
16,496,311 bp from pter
End:
16,521,369 bp from pter
Size:
25,059 bases
Orientation:
Plus strand

Genomic View for C19orf44 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C19orf44 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C19orf44 Gene

Regulatory Elements for C19orf44 Gene

Proteins for C19orf44 Gene

  • Protein details for C19orf44 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9H6X5-CS044_HUMAN
    Recommended name:
    Uncharacterized protein C19orf44
    Protein Accession:
    Q9H6X5
    Secondary Accessions:
    • Q8N6Y7

    Protein attributes for C19orf44 Gene

    Size:
    657 amino acids
    Molecular mass:
    71343 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for C19orf44 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for C19orf44 Gene

Proteomics data for C19orf44 Gene at MOPED

Post-translational modifications for C19orf44 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for C19orf44 Gene

Domains for C19orf44 Gene

Protein Domains for C19orf44 Gene

InterPro:
ProtoNet:
genes like me logo Genes that share domains with C19orf44: view

No data available for Gene Families and UniProtKB/Swiss-Prot for C19orf44 Gene

Function for C19orf44 Gene

Gene Ontology (GO) - Molecular Function for C19orf44 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with C19orf44: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C19orf44 Gene

Localization for C19orf44 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C19orf44 Gene COMPARTMENTS Subcellular localization image for C19orf44 gene
Compartment Confidence
cytosol 2
nucleus 2

No data available for Gene Ontology (GO) - Cellular Components for C19orf44 Gene

Pathways for C19orf44 Gene

SuperPathways for C19orf44 Gene

No Data Available

Interacting Proteins for C19orf44 Gene

Gene Ontology (GO) - Biological Process for C19orf44 Gene

None

No data available for Pathways by source for C19orf44 Gene

Transcripts for C19orf44 Gene

Unigene Clusters for C19orf44 Gene

Chromosome 19 open reading frame 44:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C19orf44 Gene

ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5 ^ 6a · 6b ^ 7a · 7b · 7c ^ 8 ^ 9a · 9b ^ 10
SP1:
SP2:
SP3: -
SP4: - -
SP5:

Relevant External Links for C19orf44 Gene

GeneLoc Exon Structure for
C19orf44
ECgene alternative splicing isoforms for
C19orf44

Expression for C19orf44 Gene

mRNA expression in normal human tissues for C19orf44 Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for C19orf44 Gene

SOURCE GeneReport for Unigene cluster for C19orf44 Gene Hs.631627

genes like me logo Genes that share expressions with C19orf44: view

Orthologs for C19orf44 Gene

This gene was present in the common ancestor of chordates.

Orthologs for C19orf44 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C19H19orf44 36
  • 99.31 (n)
  • 99.36 (a)
C19orf44 37
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia C19orf44 37
  • 59 (a)
OneToOne
C7H19orf44 36
  • 73.98 (n)
  • 62.3 (a)
dog
(Canis familiaris)
Mammalia C19orf44 37
  • 59 (a)
OneToOne
C20H19orf44 36
  • 73.77 (n)
  • 61.69 (a)
mouse
(Mus musculus)
Mammalia 1700030K09Rik 36
  • 66.56 (n)
  • 54.84 (a)
1700030K09Rik 16
1700030K09Rik 37
  • 49 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia C19orf44 37
  • 44 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia C19orf44 37
  • 39 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia RGD1311847 36
  • 66.84 (n)
  • 55.57 (a)
chicken
(Gallus gallus)
Aves C19orf44 37
  • 29 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia C19orf44 37
  • 32 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii C22H19orf44 37
  • 27 (a)
OneToOne
sea squirt
(Ciona savignyi)
Ascidiacea -- 37
  • 33 (a)
OneToOne
Species with no ortholog for C19orf44:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for C19orf44 Gene

ENSEMBL:
Gene Tree for C19orf44 (if available)
TreeFam:
Gene Tree for C19orf44 (if available)

Paralogs for C19orf44 Gene

No data available for Paralogs for C19orf44 Gene

Variants for C19orf44 Gene

Sequence variations from dbSNP and Humsavar for C19orf44 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs728116 -- 16,501,167(+) GATGC(C/T)GGTCT synonymous-codon, reference
rs728117 -- 16,501,200(+) CTCTC(C/T)GGGGG synonymous-codon, reference
rs3826726 -- 16,509,517(+) AGAGA(C/T)AAAAA reference, stop-gained
rs3833225 -- 16,514,801(+) TCACC(-/TCT/TTC)TGTCC intron-variant
rs4528697 -- 16,500,267(+) ATTTT(C/T)TGGGG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for C19orf44 Gene

Variant ID Type Subtype PubMed ID
nsv911167 CNV Loss 21882294

Relevant External Links for C19orf44 Gene

HapMap Linkage Disequilibrium report
C19orf44

Disorders for C19orf44 Gene

No disorders were found for C19orf44 Gene.

No data available for UniProtKB/Swiss-Prot for C19orf44 Gene

Publications for C19orf44 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Large-scale analysis of the human ubiquitin-related proteome. (PMID: 16196087) Matsumoto M. … Nakayama K.I. (Proteomics 2005) 3
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  4. Multiple loci are associated with white blood cell phenotypes. (PMID: 21738480) Nalls M.A. … Ganesh S.K. (PLoS Genet. 2011) 3
  5. A directed protein interaction network for investigating intracellular signal transduction. (PMID: 21900206) Vinayagam A. … Wanker E.E. (Sci Signal 2011) 3

Products for C19orf44 Gene

Sources for C19orf44 Gene

Back to Top

Content