Aliases for C19orf38 Gene
Aliases for C19orf38 Gene
External Ids for C19orf38 Gene
- HGNC: 34073
- Entrez Gene: 255809
- Ensembl: ENSG00000214212
- UniProtKB: A8MVS5
Previous GeneCards Identifiers for C19orf38 Gene
- GC19P010821
- GC19P010961
- GC19P010537
- GC19P010947
Summaries for C19orf38 Gene
GeneCards Summary for C19orf38 Gene
C19orf38 (Chromosome 19 Open Reading Frame 38) is a Protein Coding gene.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C19orf38 Gene
Genomics for C19orf38 Gene
Regulatory Elements for C19orf38 Gene
Enhancers for C19orf38 Gene
- Elite enhancer and/or Elite enhancer-gene association
Download GeneHancer data dump
Enhancers around C19orf38 on UCSC Golden Path with GeneCards custom track
- Transcription factor binding sites by QIAGEN in the C19orf38 gene promoter:
Regulatory Element Products
Genomic Location for C19orf38 Gene
- Chromosome:
- 19
- Start:
- 10,836,575 bp from pter
- End:
- 10,869,791 bp from pter
- Size:
- 33,217 bases
- Orientation:
- Plus strand
Genomic View for C19orf38 Gene
Genes around C19orf38 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 19p13.2 by Ensembl
- 19p13.2 by Entrez Gene
- 19p13.2 by HGNC
C19orf38 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for C19orf38 Gene
Proteins for C19orf38 Gene
-
Protein details for C19orf38 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- A8MVS5-HIDE1_HUMAN
- Recommended name:
- Protein HIDE1
- Protein Accession:
- A8MVS5
- B2RXI3
Protein attributes for C19orf38 Gene
- Size:
- 230 amino acids
- Molecular mass:
- 24753 Da
- Quaternary structure:
- No Data Available
Protein Expression for C19orf38 Gene
Post-translational modifications for C19orf38 Gene
Other Protein References for C19orf38 Gene
- ENSEMBL proteins:
- REFSEQ proteins:
Antibody Products
-
Custom Antibody ServicesOriGene Antibodies for C19orf38
- Search GeneTex for Antibodies for C19orf38
Protein Products
-
OriGene Purified Proteins for C19orf38
- Search Origene for MassSpec and Protein Over-expression Lysates for C19orf38
- Origene Custom Protein Services for C19orf38
- Search GeneTex for Proteins for C19orf38
Assay Products
No data available for DME Specific Peptides for C19orf38 Gene
Domains & Families for C19orf38 Gene
Protein Domains for C19orf38 Gene
- InterPro:
- ProtoNet:
Suggested Antigen Peptide Sequences for C19orf38 Gene
- GenScript: Design optimal peptide antigens:
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families and UniProtKB/Swiss-Prot for C19orf38 Gene
Function for C19orf38 Gene
Phenotypes for C19orf38 Gene
- MGI mutant phenotypes for C19orf38:
- inferred from 1 alleles
Animal Models for C19orf38 Gene
- MGI Knock Outs for C19orf38:
-
- AB124611 tm1.1(KOMP)Vlcg
Animal Model Products
-
Taconic Biosciences Mouse Models for C19orf38
- Cyagen custom Knockout/knockin (KOKI) mouse models for C19orf38
-
-
ViGene Biosciences lentiviral particle packaged cDNA for C19orf38 gene
-
ViGene Biosciences ready-to-package AAV shRNAs for C19orf38 gene
- Search ViGene Biosciences for C19orf38
CRISPR Products
-
OriGene CRISPR knockouts for C19orf38
-
Santa Cruz Biotechnology (SCBT) CRISPR for C19orf38
- GenScript: Design CRISPR guide RNA sequences for C19orf38
miRNA Products
- Search ViGene Biosciences for C19orf38
Inhibitory RNA Products
- Origene shRNA, siRNA, and RNAi products in human, mouse, rat for C19orf38
- Browse OriGene Inhibitory RNA Products For C19orf38
-
ViGene Biosciences ready-to-package AAV shRNAs for C19orf38 gene
Clone Products
-
OriGene ORF clones in human for C19orf38
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat
- VectorBuilder custom plasmid, inducible vectors for C19orf38
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for C19orf38
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Cell Line Products
-
Horizon Cell Lines for C19orf38
-
ViGene Biosciences adenoviral particle packaged cDNA for C19orf38 gene
-
ViGene Biosciences lentiviral particle packaged cDNA for C19orf38 gene
-
ViGene Biosciences ready-to-package AAV shRNAs for C19orf38 gene
Flow Cytometry Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , miRNA , Transcription Factor Targets and HOMER Transcription for C19orf38 Gene
Localization for C19orf38 Gene
Subcellular locations from UniProtKB/Swiss-Prot for C19orf38 Gene
- Membrane; Single-pass type I membrane protein.
| Compartment | Confidence |
|---|---|
| plasma membrane | 3 |
| extracellular | 3 |
| mitochondrion | 1 |
| lysosome | 1 |
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0016021 | integral component of membrane | IEA | -- |
Transcripts for C19orf38 Gene
mRNA/cDNA for C19orf38 Gene
- (3) REFSEQ mRNAs :
- (3) Additional mRNA sequences :
- (15) Selected AceView cDNA sequences:
- (3) Ensembl transcripts including schematic representations, and UCSC links where relevant :
Unigene Clusters for C19orf38 Gene
CRISPR Products
-
OriGene CRISPR knockouts for C19orf38
-
Santa Cruz Biotechnology (SCBT) CRISPR for C19orf38
- GenScript: Design CRISPR guide RNA sequences for C19orf38
miRNA Products
- Search ViGene Biosciences for C19orf38
Inhibitory RNA Products
- Origene shRNA, siRNA, and RNAi products in human, mouse, rat for C19orf38
- Browse OriGene Inhibitory RNA Products For C19orf38
-
ViGene Biosciences ready-to-package AAV shRNAs for C19orf38 gene
Clone Products
-
OriGene ORF clones in human for C19orf38
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat
- VectorBuilder custom plasmid, inducible vectors for C19orf38
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for C19orf38
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Flow Cytometry Products
Expression for C19orf38 Gene
mRNA expression in embryonic tissues and stem cells from LifeMap Discovery
-
Lateral Plate Mesoderm (Gastrulation Derivatives)
- Hematopoietic Stem Cells Aorta-Gonad-Mesonephros
-
Blood (Cardiovascular System)
- Hematopoietic Stem Cells Aorta-Gonad-Mesonephros
mRNA differential expression in normal tissues according to GTEx for C19orf38 Gene
This gene is overexpressed in Whole Blood (x41.7).
This gene is overexpressed in Monocytes (35.9), Testis (19.9), and Peripheral blood mononuclear cells (8.1).
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for C19orf38 Gene
- Elite partner
NURSA nuclear receptor signaling pathways regulating expression of C19orf38 Gene:
C19orf38SOURCE GeneReport for Unigene cluster for C19orf38 Gene:
Hs.440535Primer Products
No data available for mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for C19orf38 Gene
Orthologs for C19orf38 Gene
This gene was present in the common ancestor of mammals.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| chimpanzee (Pan troglodytes) |
Mammalia | C19orf38 35 |
|
OneToOne | |
| C19H19orf38 34 |
|
||||
| dog (Canis familiaris) |
Mammalia | C20H19orf38 34 |
|
||
| C19orf38 35 |
|
OneToOne | |||
| cow (Bos Taurus) |
Mammalia | C7H19orf38 34 |
|
||
| C19orf38 35 |
|
OneToOne | |||
| mouse (Mus musculus) |
Mammalia | AB124611 34 16 35 |
|
||
| rat (Rattus norvegicus) |
Mammalia | LOC691141 34 |
|
||
| oppossum (Monodelphis domestica) |
Mammalia | C19orf38 35 |
|
OneToOne | |
| platypus (Ornithorhynchus anatinus) |
Mammalia | C19orf38 35 |
|
OneToOne |
- Species where no ortholog for C19orf38 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- chicken (Gallus gallus)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- fruit fly (Drosophila melanogaster)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- lizard (Anolis carolinensis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- rainbow trout (Oncorhynchus mykiss)
- rice (Oryza sativa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea squirt (Ciona intestinalis)
- sea squirt (Ciona savignyi)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- tropical clawed frog (Silurana tropicalis)
- wheat (Triticum aestivum)
- worm (Caenorhabditis elegans)
- zebrafish (Danio rerio)
Paralogs for C19orf38 Gene
No data available for Paralogs for C19orf38 Gene
Variants for C19orf38 Gene
| SNP ID | Clin | Chr 19 pos | Sequence Context | AA Info | Type |
|---|---|---|---|---|---|
| rs1000004983 | -- | 10,841,966(+) | CTTCA(A/G)AATTT | intron-variant | |
| rs1000066619 | -- | 10,843,273(+) | TTCTC(C/T)GTCCA | intron-variant | |
| rs1000223483 | -- | 10,838,873(+) | GGGGT(C/G)TCTAC | intron-variant | |
| rs1000271041 | -- | 10,853,048(+) | TCTAC(A/C)AAAAA | intron-variant | |
| rs1000446867 | -- | 10,846,181(+) | GTCTC(-/A)AAAAA | intron-variant |
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| esv3583244 | CNV | loss | 25503493 |
| esv3643659 | CNV | loss | 21293372 |
| nsv1123220 | CNV | deletion | 24896259 |
| nsv1160584 | CNV | deletion | 26073780 |
| nsv2416 | CNV | insertion | 18451855 |
| nsv833748 | CNV | loss | 17160897 |
Gene Damage Index Score:
4.05;
60.64% of all genes are more intolerant (likely to be disease-causing)
Relevant External Links for C19orf38 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- C19orf38
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C19orf38 Gene
Disorders for C19orf38 Gene
Relevant External Links for C19orf38
No disorders were found for C19orf38 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C19orf38 Gene
Publications for C19orf38 Gene
- The DNA sequence and biology of human chromosome 19. (PMID: 15057824) Grimwood J. … Lucas S.M. (Nature 2004) 3 4 64
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4 64
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64
Products for C19orf38 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Custom Antibody ServicesOriGene Antibodies for C19orf38
- Browse OriGene ELISA Kits
- Custom Assay Services
- OriGene Purified Proteins for C19orf38
- Search Origene for MassSpec and Protein Over-expression Lysates for C19orf38
- Origene Custom Protein Services for C19orf38
- Origene shRNA, siRNA, and RNAi products in human, mouse, rat for C19orf38
- Browse OriGene Inhibitory RNA Products For C19orf38
- Browse OriGene qPCR primer pairs and template standards
- OriGene CRISPR knockouts for C19orf38
- OriGene ORF clones in human for C19orf38
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For C19orf38
- GenScript: Next-day shipping cDNA ORF clone for C19orf38 in any vector
- GenScript Custom Purified and Recombinant Proteins Services for C19orf38
- GenScript Custom Assay Services for C19orf38
- GenScript Custom overexpressing Cell Line Services for C19orf38
- GenScript: Design CRISPR guide RNA sequences for C19orf38
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for C19orf38
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Proteins
- Sino Biological Antibodies
- Sino Biological ELISA Kits and Pair Sets
- Sino Biological Cell Lysates
- Sino Biological qPCR Primers
- Sino Biological CRO Services for Proteins, Antibodies and Genes
- Sino Biological Transfection Reagents
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Taconic Biosciences Mouse Models for C19orf38
- Find your next knockout model in the Taconic Knockout Repository
- Genetically Engineered Models Available Immediately
- Humanized Mice
- Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat
- ViGene Biosciences adenoviral particle packaged cDNA for C19orf38 gene
- ViGene Biosciences lentiviral particle packaged cDNA for C19orf38 gene
- ViGene Biosciences ready-to-package AAV shRNAs for C19orf38 gene
- Search ViGene Biosciences for C19orf38
- Horizon Cell Lines for C19orf38
- Cyagen custom Knockout/knockin (KOKI) mouse models for C19orf38
- VectorBuilder custom plasmid, inducible vectors for C19orf38
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for C19orf38
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for C19orf38 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
- (117) DGIdb
- (118) ClinicalTrials
- (119) FDA Approved Drugs
- (120) RVIS
- (121) SIGNOR
- (122) diseasecard
- (123) NIH Rare Diseases
- (124) Orphanet
- (125) UMLS
- (126) GTR
- (127) Disease Ontology
- (128) Genetics Home Reference
- (129) MeSH
- (130) MedlinePlus
- (131) CDC
- (132) NINDS
- (133) NCBI Bookshelf
- (134) ClinVar
- (135) Gene Damage Index
- (136) ViGene Biosciences
- (137) HPO
- (138) UDN
- (139) VISTA
- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer