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Aliases for C19orf33 Gene

Aliases for C19orf33 Gene

  • Chromosome 19 Open Reading Frame 33 2 3 5
  • Hepatocyte Growth Factor Activator Inhibitor Type 2-Related Small Protein 2 3 4
  • Immortalization-Upregulated Protein 2 3
  • HAI-2 Related Small Protein 2 3
  • HAI-2-Related Small Protein 3 4
  • H2RSP 3 4
  • IMUP 3 4
  • IMUP-1 3
  • IMUP-2 3

External Ids for C19orf33 Gene

Previous GeneCards Identifiers for C19orf33 Gene

  • GC19P043489
  • GC19P043490
  • GC19P038794
  • GC19P035242

Summaries for C19orf33 Gene

Entrez Gene Summary for C19orf33 Gene

  • The protein encoded by this gene has been shown to be upregulated in SV40-immortalized fibroblasts as well as in endometrial carcinoma cells. The encoded protein is found primarily in the nucleus. This protein may play a role in placental development and diseases such as pre-eclampsia. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Dec 2015]

GeneCards Summary for C19orf33 Gene

C19orf33 (Chromosome 19 Open Reading Frame 33) is a Protein Coding gene. Diseases associated with C19orf33 include pre-eclampsia and eclampsia. GO annotations related to this gene include double-stranded DNA binding and single-stranded DNA binding.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C19orf33 Gene

Genomics for C19orf33 Gene

Regulatory Elements for C19orf33 Gene

Promoters for C19orf33 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around C19orf33 on UCSC Golden Path with GeneCards custom track

Genomic Location for C19orf33 Gene

Chromosome:
19
Start:
38,304,161 bp from pter
End:
38,305,009 bp from pter
Size:
849 bases
Orientation:
Plus strand

Genomic View for C19orf33 Gene

Genes around C19orf33 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C19orf33 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C19orf33 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C19orf33 Gene

Proteins for C19orf33 Gene

  • Protein details for C19orf33 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9GZP8-IMUP_HUMAN
    Recommended name:
    Immortalization up-regulated protein
    Protein Accession:
    Q9GZP8
    Secondary Accessions:
    • Q0P6G2
    • Q96H58
    • Q9HCR4

    Protein attributes for C19orf33 Gene

    Size:
    106 amino acids
    Molecular mass:
    10897 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for C19orf33 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for C19orf33 Gene

Proteomics data for C19orf33 Gene at MOPED

Post-translational modifications for C19orf33 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C19orf33 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C19orf33 Gene

Domains & Families for C19orf33 Gene

Protein Domains for C19orf33 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for C19orf33 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C19orf33: view

No data available for Gene Families and UniProtKB/Swiss-Prot for C19orf33 Gene

Function for C19orf33 Gene

Gene Ontology (GO) - Molecular Function for C19orf33 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003690 NOT double-stranded DNA binding IDA 11080599
genes like me logo Genes that share ontologies with C19orf33: view
genes like me logo Genes that share phenotypes with C19orf33: view

Animal Model Products

CRISPR Products

miRNA Products

Inhibitory RNA Products

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C19orf33 Gene

Localization for C19orf33 Gene

Subcellular locations from UniProtKB/Swiss-Prot for C19orf33 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C19orf33 Gene COMPARTMENTS Subcellular localization image for C19orf33 gene
Compartment Confidence
nucleus 5
cytosol 1
extracellular 1

No data available for Gene Ontology (GO) - Cellular Components for C19orf33 Gene

Pathways & Interactions for C19orf33 Gene

SuperPathways for C19orf33 Gene

No Data Available

Interacting Proteins for C19orf33 Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000301246%0d%0a9606.ENSP00000347858%0d%0a
Selected Interacting proteins: ENSP00000301246 for C19orf33 Gene via STRING

Symbol External ID(s) Details
XIAP

Gene Ontology (GO) - Biological Process for C19orf33 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for C19orf33 Gene

Drugs & Compounds for C19orf33 Gene

No Compound Related Data Available

Transcripts for C19orf33 Gene

Unigene Clusters for C19orf33 Gene

Chromosome 19 open reading frame 33:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for C19orf33 Gene

No ASD Table

Relevant External Links for C19orf33 Gene

GeneLoc Exon Structure for
C19orf33
ECgene alternative splicing isoforms for
C19orf33

Expression for C19orf33 Gene

mRNA expression in normal human tissues for C19orf33 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for C19orf33 Gene

This gene is overexpressed in Esophagus - Mucosa (x10.5).

Protein differential expression in normal tissues from HIPED for C19orf33 Gene

This gene is overexpressed in Peripheral blood mononuclear cells (20.7), Cervix (19.4), and Amniocyte (9.1).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MOPED, and MaxQB for C19orf33 Gene



SOURCE GeneReport for Unigene cluster for C19orf33 Gene Hs.631544

genes like me logo Genes that share expression patterns with C19orf33: view

Primer Products

In Situ Assay Products

No data available for mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for C19orf33 Gene

Orthologs for C19orf33 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for C19orf33 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C19ORF33 36
  • 98 (a)
OneToMany
Species with no ortholog for C19orf33:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C19orf33 Gene

ENSEMBL:
Gene Tree for C19orf33 (if available)
TreeFam:
Gene Tree for C19orf33 (if available)

Paralogs for C19orf33 Gene

No data available for Paralogs for C19orf33 Gene

Variants for C19orf33 Gene

Sequence variations from dbSNP and Humsavar for C19orf33 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs4802326 -- 38,302,587(+) TGGGC(C/T)CAAGT upstream-variant-2KB
rs4802327 -- 38,302,679(+) CCCTC(A/G)TCTTC upstream-variant-2KB
rs11672219 -- 38,302,956(+) ctcct(C/G)acact upstream-variant-2KB
rs79245275 -- 38,302,817(+) GGTCA(G/T)CAGGT upstream-variant-2KB
rs118014654 -- 38,302,496(+) GGAAC(C/T)ACAGG upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for C19orf33 Gene

Variant ID Type Subtype PubMed ID
nsv833822 CNV Loss 17160897
nsv911658 CNV Loss 21882294

Variation tolerance for C19orf33 Gene

Residual Variation Intolerance Score: 47.7% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 9.09; 87.67% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for C19orf33 Gene

HapMap Linkage Disequilibrium report
C19orf33

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C19orf33 Gene

Disorders for C19orf33 Gene

MalaCards: The human disease database

(2) MalaCards diseases for C19orf33 Gene - From: DISEASES and GeneCards

Disorder Aliases PubMed IDs
pre-eclampsia
  • preeclampsia
eclampsia
  • eclampsia in puerperium
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for C19orf33

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
C19orf33
genes like me logo Genes that share disorders with C19orf33: view

No data available for UniProtKB/Swiss-Prot and Genatlas for C19orf33 Gene

Publications for C19orf33 Gene

  1. Identification of cDNAs encoding two novel nuclear proteins, IMUP-1 and IMUP-2, upregulated in SV40-immortalized human fibroblasts. (PMID: 11080599) Kim J.K. … Kato S. (Gene 2000) 2 3 4 23 67
  2. Increased immortalization-upregulated protein 2 (IMUP-2) by hypoxia induces apoptosis of the trophoblast and pre-eclampsia. (PMID: 20432246) Jeon S.Y. … Kim G.J. (J. Cell. Biochem. 2010) 3 23
  3. Imup-1 and imup-2 overexpression in endometrial carcinoma in Korean and Japanese populations. (PMID: 18507030) Kim S.J. … Kim J.K. (Anticancer Res. 2008) 3 23
  4. Enhanced expression of hepatocyte growth factor activator inhibitor type 2-related small peptide at the invasive front of colon cancers. (PMID: 16809422) Uchiyama S. … Kataoka H. (Gut 2007) 3 23
  5. IMUP-1 and IMUP-2 genes are up-regulated in human ovarian epithelial tumors. (PMID: 14981917) Kim J.K. … Cha K.Y. (Anticancer Res. 2003) 3 23

Products for C19orf33 Gene

Sources for C19orf33 Gene

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