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Aliases for C19orf33 Gene

Aliases for C19orf33 Gene

  • Chromosome 19 Open Reading Frame 33 2 3
  • Hepatocyte Growth Factor Activator Inhibitor Type 2-Related Small Protein 2 3 4
  • Immortalization-Upregulated Protein 2 3
  • HAI-2 Related Small Protein 2 3
  • HAI-2-Related Small Protein 3 4
  • H2RSP 3 4
  • IMUP 3 4
  • Immortalization Up-Regulated Protein 3
  • IMUP-1 3
  • IMUP-2 3

External Ids for C19orf33 Gene

Summaries for C19orf33 Gene

GeneCards Summary for C19orf33 Gene

C19orf33 (Chromosome 19 Open Reading Frame 33) is a Protein Coding gene. GO annotations related to this gene include double-stranded DNA binding and single-stranded DNA binding. An important paralog of this gene is ENSG00000267748.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C19orf33 Gene

Genomics for C19orf33 Gene

Genomic Location for C19orf33 Gene

Start:
38,304,161 bp from pter
End:
38,305,009 bp from pter
Size:
849 bases
Orientation:
Plus strand

Genomic View for C19orf33 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C19orf33 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C19orf33 Gene

Regulatory Elements for C19orf33 Gene

Proteins for C19orf33 Gene

  • Protein details for C19orf33 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9GZP8-IMUP_HUMAN
    Recommended name:
    Immortalization up-regulated protein
    Protein Accession:
    Q9GZP8
    Secondary Accessions:
    • Q0P6G2
    • Q96H58
    • Q9HCR4

    Protein attributes for C19orf33 Gene

    Size:
    106 amino acids
    Molecular mass:
    10897 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for C19orf33 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for C19orf33 Gene

Proteomics data for C19orf33 Gene at MOPED

Post-translational modifications for C19orf33 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C19orf33 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C19orf33 Gene

Domains for C19orf33 Gene

Protein Domains for C19orf33 Gene

InterPro:
ProtoNet:
genes like me logo Genes that share domains with C19orf33: view

No data available for Gene Families and UniProtKB/Swiss-Prot for C19orf33 Gene

Function for C19orf33 Gene

Gene Ontology (GO) - Molecular Function for C19orf33 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003690 NOT double-stranded DNA binding IDA 11080599
GO:0003697 NOT single-stranded DNA binding IDA 11080599
genes like me logo Genes that share ontologies with C19orf33: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C19orf33 Gene

Localization for C19orf33 Gene

Subcellular locations from UniProtKB/Swiss-Prot for C19orf33 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C19orf33 Gene COMPARTMENTS Subcellular localization image for C19orf33 gene
Compartment Confidence
nucleus 5
cytosol 1
extracellular 1

Gene Ontology (GO) - Cellular Components for C19orf33 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IDA 11080599
genes like me logo Genes that share ontologies with C19orf33: view

Pathways for C19orf33 Gene

SuperPathways for C19orf33 Gene

No Data Available

Interacting Proteins for C19orf33 Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000301246%0d%0a9606.ENSP00000347858%0d%0a
Selected Interacting proteins: ENSP00000301246 for C19orf33 Gene via STRING

Symbol External ID(s) Details
XIAP

Gene Ontology (GO) - Biological Process for C19orf33 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0008150 biological_process ND --
genes like me logo Genes that share ontologies with C19orf33: view

No data available for Pathways by source for C19orf33 Gene

Transcripts for C19orf33 Gene

Unigene Clusters for C19orf33 Gene

Chromosome 19 open reading frame 33:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C19orf33 Gene

No ASD Table

Relevant External Links for C19orf33 Gene

GeneLoc Exon Structure for
C19orf33
ECgene alternative splicing isoforms for
C19orf33

Expression for C19orf33 Gene

mRNA expression in normal human tissues for C19orf33 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for C19orf33 Gene

This gene is overexpressed in Esophagus - Mucosa (10.5).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for C19orf33 Gene

SOURCE GeneReport for Unigene cluster for C19orf33 Gene Hs.631544

genes like me logo Genes that share expressions with C19orf33: view

Orthologs for C19orf33 Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for C19orf33 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C19ORF33 37
  • 98 (a)
OneToMany
mouse
(Mus musculus)
Mammalia 2200002D01Rik 16
Species with no ortholog for C19orf33:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C19orf33 Gene

ENSEMBL:
Gene Tree for C19orf33 (if available)
TreeFam:
Gene Tree for C19orf33 (if available)

Paralogs for C19orf33 Gene

Paralogs for C19orf33 Gene

genes like me logo Genes that share paralogs with C19orf33: view

Variants for C19orf33 Gene

Sequence variations from dbSNP and Humsavar for C19orf33 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs4802326 -- 38,302,587(+) TGGGC(C/T)CAAGT upstream-variant-2KB
rs4802327 -- 38,302,679(+) CCCTC(A/G)TCTTC upstream-variant-2KB
rs11672219 -- 38,302,956(+) ctcct(C/G)acact upstream-variant-2KB
rs73037343 -- 38,302,745(+) TGAAT(A/G)TTTGT upstream-variant-2KB
rs75349505 -- 38,302,433(+) GCTTA(C/G)TGCAG upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for C19orf33 Gene

Variant ID Type Subtype PubMed ID
nsv833822 CNV Loss 17160897
nsv911658 CNV Loss 21882294

Relevant External Links for C19orf33 Gene

HapMap Linkage Disequilibrium report
C19orf33

Disorders for C19orf33 Gene

(1) Novoseek inferred disease relationships for C19orf33 Gene

Disease -log(P) Hits PubMed IDs
cancer 0 1
genes like me logo Genes that share disorders with C19orf33: view

No data available for UniProtKB/Swiss-Prot for C19orf33 Gene

Publications for C19orf33 Gene

  1. Identification of cDNAs encoding two novel nuclear proteins, IMUP-1 and IMUP-2, upregulated in SV40-immortalized human fibroblasts. (PMID: 11080599) Kim J.K. … Kato S. (Gene 2000) 2 3 4 23
  2. Identification of hepatocyte growth factor activator inhibitor type 2 (HAI-2)-related small peptide (H2RSP): its nuclear localization and generation of chimeric mRNA transcribed from both HAI-2 and H2RSP genes. (PMID: 11606055) Itoh H.K. … Koono M.R. (Biochem. Biophys. Res. Commun. 2001) 3 4 23
  3. IMUP-1 and IMUP-2 genes are up-regulated in human ovarian epithelial tumors. (PMID: 14981917) Kim J.K. … Cha K.Y. (Anticancer Res. 2003) 3 23
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  5. Imup-1 and imup-2 overexpression in endometrial carcinoma in Korean and Japanese populations. (PMID: 18507030) Kim S.J. … Kim J.K. (Anticancer Res. 2008) 3 23

Products for C19orf33 Gene

Sources for C19orf33 Gene

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