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Aliases for C19orf24 Gene

Aliases for C19orf24 Gene

  • Chromosome 19 Open Reading Frame 24 2 3 5

External Ids for C19orf24 Gene

Previous GeneCards Identifiers for C19orf24 Gene

  • GC19P001228
  • GC19P001229
  • GC19P001049
  • GC19P001276
  • GC19P001278
  • GC19P001282
  • GC19P001289
  • GC19P001292
  • GC19P001294
  • GC19P001302
  • GC19P001304

Summaries for C19orf24 Gene

GeneCards Summary for C19orf24 Gene

C19orf24 (Chromosome 19 Open Reading Frame 24) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C19orf24 Gene

Genomics for C19orf24 Gene

Regulatory Elements for C19orf24 Gene

Enhancers for C19orf24 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19F001236 1.6 FANTOM5 ENCODE 37.9 -18.6 -18580 41.1 MLX CREB3L1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF416 ZNF143 ZNF263 SF3A2 TMEM259 LOC100288123 C19orf24 MIER2 ENSG00000267317 MIDN CIRBP MUM1 RPS15
GH19F000995 1.6 FANTOM5 Ensembl ENCODE 12.9 -279.2 -279229 1.5 ATF1 GLI4 ZNF2 GLIS2 ZNF416 KLF7 FOS PAF1 SP3 YY2 WDR18 MIER2 GZMM LOC100288123 ENSG00000267317 TMEM259 C19orf24 SCAMP4 GRIN3B ARHGAP45
GH19F001744 1.6 FANTOM5 Ensembl ENCODE 12.9 +472.4 472402 7.1 HDGF PKNOX1 ARNT ZNF2 YY1 ZNF766 CBX5 FOS KLF13 ZNF263 SCAMP4 CIRBP ENSG00000266990 LINC01775 C19orf24 ATP8B3 MIR1909 REXO1 TMEM259 TCF3
GH19F002079 1.6 FANTOM5 ENCODE 12.9 +813.4 813415 18.9 MLX CREB3L1 DMAP1 YBX1 SLC30A9 ZNF143 ZNF263 SP3 NFYC TBX21 SF3A2 CIRBP MKNK2 LINC01775 ENSG00000267063 ZNF77 C19orf24 BTBD2 SCAMP4 RPS15
GH19F001025 1.5 FANTOM5 ENCODE 12.9 -247.1 -247058 5.8 PKNOX1 ARNT CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF143 SP3 NFYC ABCA7 CNN2 C19orf24 ARHGAP45 SCAMP4 GRIN3B SBNO2 GZMM R3HDM4 RNU6-2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around C19orf24 on UCSC Golden Path with GeneCards custom track

Promoters for C19orf24 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001815143 262 1801 HDGF PKNOX1 CREB3L1 ARID4B SIN3A DMAP1 ZNF2 ZNF207 ZNF143 FOS

Genomic Location for C19orf24 Gene

Chromosome:
19
Start:
1,275,438 bp from pter
End:
1,279,249 bp from pter
Size:
3,812 bases
Orientation:
Plus strand

Genomic View for C19orf24 Gene

Genes around C19orf24 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C19orf24 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C19orf24 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C19orf24 Gene

Proteins for C19orf24 Gene

  • Protein details for C19orf24 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9BVV8-CS024_HUMAN
    Recommended name:
    Uncharacterized membrane protein C19orf24
    Protein Accession:
    Q9BVV8
    Secondary Accessions:
    • Q9NWS2

    Protein attributes for C19orf24 Gene

    Size:
    132 amino acids
    Molecular mass:
    14249 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAA91305.1; Type=Miscellaneous discrepancy; Evidence={ECO:0000305};

neXtProt entry for C19orf24 Gene

Post-translational modifications for C19orf24 Gene

  • Glycosylation at Asn 47
  • Modification sites at PhosphoSitePlus

Other Protein References for C19orf24 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C19orf24 Gene

Domains & Families for C19orf24 Gene

Protein Domains for C19orf24 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for C19orf24 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C19orf24: view

No data available for Gene Families and UniProtKB/Swiss-Prot for C19orf24 Gene

Function for C19orf24 Gene

genes like me logo Genes that share phenotypes with C19orf24: view

Animal Model Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for C19orf24 Gene

Localization for C19orf24 Gene

Subcellular locations from UniProtKB/Swiss-Prot for C19orf24 Gene

Membrane; Single-pass type I membrane protein.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for C19orf24 gene
Compartment Confidence
extracellular 5
nucleus 3
golgi apparatus 3
cytosol 2
plasma membrane 1

Gene Ontology (GO) - Cellular Components for C19orf24 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region IDA 16847563
GO:0005737 cytoplasm IDA 16847563
GO:0016020 membrane IEA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with C19orf24: view

Pathways & Interactions for C19orf24 Gene

SuperPathways for C19orf24 Gene

No Data Available

Interacting Proteins for C19orf24 Gene

Gene Ontology (GO) - Biological Process for C19orf24 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for C19orf24 Gene

Transcripts for C19orf24 Gene

Unigene Clusters for C19orf24 Gene

Chromosome 19 open reading frame 24:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for C19orf24 Gene

No ASD Table

Relevant External Links for C19orf24 Gene

GeneLoc Exon Structure for
C19orf24
ECgene alternative splicing isoforms for
C19orf24

Expression for C19orf24 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for C19orf24 Gene

NURSA nuclear receptor signaling pathways regulating expression of C19orf24 Gene:

C19orf24

SOURCE GeneReport for Unigene cluster for C19orf24 Gene:

Hs.591383
genes like me logo Genes that share expression patterns with C19orf24: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for C19orf24 Gene

Orthologs for C19orf24 Gene

This gene was present in the common ancestor of mammals.

Orthologs for C19orf24 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C19orf24 35
  • 98 (a)
OneToOne
C19H19orf24 34
  • 95.2 (n)
dog
(Canis familiaris)
Mammalia C19orf24 35
  • 88 (a)
OneToOne
cow
(Bos Taurus)
Mammalia C7H19orf24 34 35
  • 81.13 (n)
mouse
(Mus musculus)
Mammalia 1600002K03Rik 34 16 35
  • 69.18 (n)
rat
(Rattus norvegicus)
Mammalia RGD1562114 34
  • 66.67 (n)
Species where no ortholog for C19orf24 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C19orf24 Gene

ENSEMBL:
Gene Tree for C19orf24 (if available)
TreeFam:
Gene Tree for C19orf24 (if available)

Paralogs for C19orf24 Gene

No data available for Paralogs for C19orf24 Gene

Variants for C19orf24 Gene

Sequence variations from dbSNP and Humsavar for C19orf24 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs1046275 -- 1,279,136(+) GCCCA(A/G)AGCCA utr-variant-3-prime
rs1054695 -- 1,274,602(+) GTCCC(C/T)CGCCT intron-variant, upstream-variant-2KB, utr-variant-3-prime
rs111343011 -- 1,273,893(+) GTGCA(A/G)CCAGG intron-variant, nc-transcript-variant, upstream-variant-2KB, utr-variant-3-prime
rs111537791 -- 1,273,804(+) TTTTT(G/T)TTTTT intron-variant, nc-transcript-variant, upstream-variant-2KB, utr-variant-3-prime
rs112110958 -- 1,279,044(+) GGAGG(A/G)ACCCC utr-variant-3-prime

Structural Variations from Database of Genomic Variants (DGV) for C19orf24 Gene

Variant ID Type Subtype PubMed ID
nsv9662 CNV gain 18304495
nsv953941 CNV deletion 24416366
nsv470104 CNV loss 18288195
nsv470103 CNV gain 18288195
nsv138017 CNV insertion 16902084
nsv1160555 CNV deletion 26073780
nsv1143898 CNV deletion 24896259
nsv1060536 CNV gain 25217958
nsv1058677 CNV loss 25217958
nsv1055164 CNV gain 25217958
esv990677 CNV insertion 20482838
esv3643391 CNV gain 21293372
esv3643390 CNV loss 21293372
esv3643389 CNV gain 21293372
esv3395739 CNV insertion 20981092
esv3368458 CNV duplication 20981092
esv2758743 CNV gain+loss 17122850
esv1779341 CNV insertion 17803354
dgv136n111 CNV deletion 26073780

Variation tolerance for C19orf24 Gene

Gene Damage Index Score: 0.57; 12.22% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for C19orf24 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
C19orf24

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C19orf24 Gene

Disorders for C19orf24 Gene

Relevant External Links for C19orf24

Genetic Association Database (GAD)
C19orf24
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
C19orf24

No disorders were found for C19orf24 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C19orf24 Gene

Publications for C19orf24 Gene

  1. A novel recently evolved gene C19orf24 encodes a non-classical secreted protein. (PMID: 16847563) Wang X.R. … Han Z.G. (Cell. Mol. Biol. Lett. 2006) 2 3 64
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 64
  4. Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis. (PMID: 20068231) Olsen J.V. … Mann M. (Sci. Signal. 2010) 4 64
  5. A quantitative atlas of mitotic phosphorylation. (PMID: 18669648) Dephoure N. … Gygi S.P. (Proc. Natl. Acad. Sci. U.S.A. 2008) 4 64

Products for C19orf24 Gene

Sources for C19orf24 Gene

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