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Aliases for C19orf18 Gene

Aliases for C19orf18 Gene

  • Chromosome 19 Open Reading Frame 18 2 3

External Ids for C19orf18 Gene

Previous GeneCards Identifiers for C19orf18 Gene

  • GC19M063162
  • GC19M063163
  • GC19M058469
  • GC19M054780

Summaries for C19orf18 Gene

GeneCards Summary for C19orf18 Gene

C19orf18 (Chromosome 19 Open Reading Frame 18) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C19orf18 Gene

Genomics for C19orf18 Gene

Regulatory Elements for C19orf18 Gene

Genomic Location for C19orf18 Gene

Start:
57,958,437 bp from pter
End:
57,974,534 bp from pter
Size:
16,098 bases
Orientation:
Minus strand

Genomic View for C19orf18 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C19orf18 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C19orf18 Gene

Proteins for C19orf18 Gene

  • Protein details for C19orf18 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8NEA5-CS018_HUMAN
    Recommended name:
    Uncharacterized protein C19orf18
    Protein Accession:
    Q8NEA5
    Secondary Accessions:

    Protein attributes for C19orf18 Gene

    Size:
    215 amino acids
    Molecular mass:
    24151 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C19orf18 Gene

Proteomics data for C19orf18 Gene at MOPED

Post-translational modifications for C19orf18 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C19orf18 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C19orf18 Gene

Domains for C19orf18 Gene

Protein Domains for C19orf18 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C19orf18: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C19orf18 Gene

Function for C19orf18 Gene

Gene Ontology (GO) - Molecular Function for C19orf18 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003674 molecular_function ND --
genes like me logo Genes that share ontologies with C19orf18: view

Animal Model Products

CRISPR Products

miRNA for C19orf18 Gene

miRTarBase miRNAs that target C19orf18

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for C19orf18

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for C19orf18 Gene

Localization for C19orf18 Gene

Subcellular locations from UniProtKB/Swiss-Prot for C19orf18 Gene

Membrane; Single-pass type I membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C19orf18 Gene COMPARTMENTS Subcellular localization image for C19orf18 gene
Compartment Confidence
extracellular 2
cytosol 1
endoplasmic reticulum 1
golgi apparatus 1
mitochondrion 1
peroxisome 1
plasma membrane 1

Gene Ontology (GO) - Cellular Components for C19orf18 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
GO:0070062 extracellular exosome IDA 19056867
genes like me logo Genes that share ontologies with C19orf18: view

Pathways for C19orf18 Gene

SuperPathways for C19orf18 Gene

No Data Available

Interacting Proteins for C19orf18 Gene

Gene Ontology (GO) - Biological Process for C19orf18 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0008150 biological_process ND --
genes like me logo Genes that share ontologies with C19orf18: view

No data available for Pathways by source for C19orf18 Gene

Transcripts for C19orf18 Gene

mRNA/cDNA for C19orf18 Gene

(113) Selected AceView cDNA sequences:
(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for C19orf18 Gene

Chromosome 19 open reading frame 18:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for C19orf18

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for C19orf18 Gene

No ASD Table

Relevant External Links for C19orf18 Gene

GeneLoc Exon Structure for
C19orf18
ECgene alternative splicing isoforms for
C19orf18

Expression for C19orf18 Gene

mRNA expression in normal human tissues for C19orf18 Gene

mRNA differential expression in normal tissues according to GTEx for C19orf18 Gene

This gene is overexpressed in Testis (6.1).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for C19orf18 Gene

SOURCE GeneReport for Unigene cluster for C19orf18 Gene Hs.134209

genes like me logo Genes that share expressions with C19orf18: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for C19orf18 Gene

Orthologs for C19orf18 Gene

This gene was present in the common ancestor of mammals.

Orthologs for C19orf18 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C19H19orf18 35
  • 99.53 (n)
  • 98.6 (a)
C19orf18 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia C18H19orf18 35
  • 70.43 (n)
  • 57.44 (a)
dog
(Canis familiaris)
Mammalia C19orf18 36
  • 71 (a)
OneToOne
C1H19orf18 35
  • 62.91 (n)
  • 52.11 (a)
mouse
(Mus musculus)
Mammalia 2900092C05Rik 35
  • 63.41 (n)
  • 45.11 (a)
2900092C05Rik 16
2900092C05Rik 36
  • 46 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia LOC691722 35
  • 62.56 (n)
  • 44.83 (a)
Species with no ortholog for C19orf18:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C19orf18 Gene

ENSEMBL:
Gene Tree for C19orf18 (if available)
TreeFam:
Gene Tree for C19orf18 (if available)

Paralogs for C19orf18 Gene

No data available for Paralogs for C19orf18 Gene

Variants for C19orf18 Gene

Sequence variations from dbSNP and Humsavar for C19orf18 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs257669 -- 57,961,179(+) GCAGT(A/G)AGCAG intron-variant
rs257670 -- 57,962,116(+) gctgc(A/C)aactc intron-variant
rs257671 -- 57,965,153(+) atttg(A/C)gacag intron-variant
rs257672 -- 57,966,847(+) ctcac(C/T)gcaac intron-variant
rs257673 -- 57,967,128(+) gggat(C/T)gggca intron-variant

Structural Variations from Database of Genomic Variants (DGV) for C19orf18 Gene

Variant ID Type Subtype PubMed ID
nsv525611 CNV Loss 19592680

Relevant External Links for C19orf18 Gene

HapMap Linkage Disequilibrium report
C19orf18
Human Gene Mutation Database (HGMD)
C19orf18

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C19orf18 Gene

Disorders for C19orf18 Gene

No disorders were found for C19orf18 Gene.

No data available for UniProtKB/Swiss-Prot for C19orf18 Gene

Publications for C19orf18 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. Large-scale proteomics and phosphoproteomics of urinary exosomes. (PMID: 19056867) Gonzales P.A. … Knepper M.A. (J. Am. Soc. Nephrol. 2009) 3
  4. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) OlA!h J. … OvA!di J. (J. Biol. Chem. 2011) 3
  5. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie A.G. … Butte N.F. (PLoS ONE 2012) 3

Products for C19orf18 Gene

Sources for C19orf18 Gene

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