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Aliases for C18orf61 Gene

Subcategory (RNA class) for C18orf61 Gene


Quality Score for this RNA gene is


Aliases for C18orf61 Gene

  • Uncharacterized LOC497259 3

External Ids for C18orf61 Gene

Previous GeneCards Identifiers for C18orf61 Gene

  • GC18U900216
  • GC18P012202
  • GC18P012204
  • GC18P012267

Summaries for C18orf61 Gene

GeneCards Summary for C18orf61 Gene

C18orf61 (Uncharacterized LOC497259) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C18orf61 Gene

Genomics for C18orf61 Gene

Regulatory Elements for C18orf61 Gene

Enhancers for C18orf61 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH18F012199 0.9 Ensembl ENCODE 0.8 -0.5 -479 1.0 FOSL1 EED CREM SMARCE1 RNF2 MTA2 NRF1 JUNB DPF2 ARID1B ENSG00000267733 ENSG00000279285 ENSG00000267643 C18orf61
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around C18orf61 on UCSC Golden Path with GeneCards custom track

Genomic Location for C18orf61 Gene

12,200,779 bp from pter
12,224,711 bp from pter
23,933 bases
Plus strand

Genomic View for C18orf61 Gene

Genes around C18orf61 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C18orf61 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C18orf61 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C18orf61 Gene

Proteins for C18orf61 Gene

Post-translational modifications for C18orf61 Gene

No Post-translational modifications

No data available for DME Specific Peptides for C18orf61 Gene

Domains & Families for C18orf61 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C18orf61 Gene

Function for C18orf61 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C18orf61 Gene

Localization for C18orf61 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for C18orf61 Gene

Pathways & Interactions for C18orf61 Gene

SuperPathways for C18orf61 Gene

No Data Available

Interacting Proteins for C18orf61 Gene

Gene Ontology (GO) - Biological Process for C18orf61 Gene


No data available for Pathways by source and SIGNOR curated interactions for C18orf61 Gene

Transcripts for C18orf61 Gene

mRNA/cDNA for C18orf61 Gene

(1) Additional mRNA sequences :

Unigene Clusters for C18orf61 Gene

Uncharacterized LOC497259:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C18orf61 Gene

No ASD Table

Relevant External Links for C18orf61 Gene

GeneLoc Exon Structure for

Expression for C18orf61 Gene

mRNA expression in normal human tissues for C18orf61 Gene

mRNA differential expression in normal tissues according to GTEx for C18orf61 Gene

This gene is overexpressed in Pancreas (x21.3) and Testis (x19.5).

SOURCE GeneReport for Unigene cluster for C18orf61 Gene:

genes like me logo Genes that share expression patterns with C18orf61: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for C18orf61 Gene

Orthologs for C18orf61 Gene

No data available for Orthologs and Evolution for C18orf61 Gene

Paralogs for C18orf61 Gene

No data available for Paralogs for C18orf61 Gene

Variants for C18orf61 Gene

Sequence variations from dbSNP and Humsavar for C18orf61 Gene

SNP ID Clin Chr 18 pos Sequence Context AA Info Type
rs10459998 -- 12,207,204(+) atacc(C/T)tttct intron-variant
rs1051604 -- 12,218,773(+) TTTTC(C/G)GATCC nc-transcript-variant
rs1056529 -- 12,224,394(+) TGATT(G/T)GCTTT nc-transcript-variant
rs1056530 -- 12,224,443(+) TACCT(A/G)TAGGT nc-transcript-variant
rs1056531 -- 12,224,473(+) AATTA(A/C)ATCAT nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for C18orf61 Gene

Variant ID Type Subtype PubMed ID
dgv974e212 CNV loss 25503493
esv3582976 CNV loss 25503493
esv3641829 CNV gain 21293372
esv3641830 CNV loss 21293372
nsv1055343 CNV gain 25217958
nsv1063125 CNV loss 25217958
nsv1129331 OTHER inversion 24896259
nsv1146564 CNV duplication 26484159
nsv1153637 OTHER inversion 26484159
nsv507861 OTHER sequence alteration 20534489
nsv960252 CNV duplication 23825009

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for C18orf61 Gene

Disorders for C18orf61 Gene

Relevant External Links for C18orf61

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for C18orf61 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C18orf61 Gene

Publications for C18orf61 Gene

No publications were found for C18orf61 Gene.

Products for C18orf61 Gene

Sources for C18orf61 Gene

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