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Aliases for C17orf98 Gene

Aliases for C17orf98 Gene

  • Chromosome 17 Open Reading Frame 98 2 3

External Ids for C17orf98 Gene

Previous GeneCards Identifiers for C17orf98 Gene

  • GC17M034245
  • GC17M036991
  • GC17M032786

Summaries for C17orf98 Gene

GeneCards Summary for C17orf98 Gene

C17orf98 (Chromosome 17 Open Reading Frame 98) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C17orf98 Gene

Genomics for C17orf98 Gene

Regulatory Elements for C17orf98 Gene

Genomic Location for C17orf98 Gene

38,835,088 bp from pter
38,841,455 bp from pter
6,368 bases
Minus strand

Genomic View for C17orf98 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C17orf98 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C17orf98 Gene

Proteins for C17orf98 Gene

  • Protein details for C17orf98 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Uncharacterized protein C17orf98
    Protein Accession:
    Secondary Accessions:

    Protein attributes for C17orf98 Gene

    154 amino acids
    Molecular mass:
    17565 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C17orf98 Gene

Proteomics data for C17orf98 Gene at MOPED

Post-translational modifications for C17orf98 Gene

No Post-translational modifications

Other Protein References for C17orf98 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C17orf98 Gene

Domains for C17orf98 Gene

Protein Domains for C17orf98 Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C17orf98: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C17orf98 Gene

Function for C17orf98 Gene

Animal Model Products

CRISPR Products

miRNA for C17orf98 Gene

miRTarBase miRNAs that target C17orf98

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , Transcription Factor Targets and HOMER Transcription for C17orf98 Gene

Localization for C17orf98 Gene

Subcellular locations from

Jensen Localization Image for C17orf98 Gene COMPARTMENTS Subcellular localization image for C17orf98 gene
Compartment Confidence
cytosol 2
nucleus 2
extracellular 1
mitochondrion 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for C17orf98 Gene

Pathways for C17orf98 Gene

SuperPathways for C17orf98 Gene

No Data Available

Interacting Proteins for C17orf98 Gene

Gene Ontology (GO) - Biological Process for C17orf98 Gene


No data available for Pathways by source for C17orf98 Gene

Transcripts for C17orf98 Gene

mRNA/cDNA for C17orf98 Gene

(4) Selected AceView cDNA sequences:
(0) Additional mRNA sequences :
(3) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for C17orf98 Gene

Chromosome 17 open reading frame 98:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for C17orf98

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for C17orf98 Gene

No ASD Table

Relevant External Links for C17orf98 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for C17orf98 Gene

mRNA expression in normal human tissues for C17orf98 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for C17orf98 Gene

This gene is overexpressed in Testis (48.3).

SOURCE GeneReport for Unigene cluster for C17orf98 Gene Hs.250182

genes like me logo Genes that share expressions with C17orf98: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for C17orf98 Gene

Orthologs for C17orf98 Gene

This gene was present in the common ancestor of chordates.

Orthologs for C17orf98 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia C19H17orf98 35
  • 83.55 (n)
  • 81.82 (a)
(Canis familiaris)
Mammalia C9H17orf98 35
  • 83.98 (n)
  • 83.77 (a)
(Mus musculus)
Mammalia 1700001P01Rik 35
  • 75.32 (n)
  • 77.27 (a)
1700001P01Rik 16
(Pan troglodytes)
Mammalia C17H17orf98 35
  • 99.57 (n)
  • 100 (a)
(Rattus norvegicus)
Mammalia LOC691189 35
  • 78.81 (n)
  • 80.13 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia LOC100494322 35
  • 57.11 (n)
  • 51.33 (a)
Species with no ortholog for C17orf98:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C17orf98 Gene

Gene Tree for C17orf98 (if available)
Gene Tree for C17orf98 (if available)

Paralogs for C17orf98 Gene

No data available for Paralogs for C17orf98 Gene

Variants for C17orf98 Gene

Sequence variations from dbSNP and Humsavar for C17orf98 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type MAF
rs116498909 -- 38,839,378(+) TGGGA(A/G)GATCG intron-variant
rs115363157 -- 38,841,994(+) GTGTG(A/G)TGGCG upstream-variant-2KB
rs115295772 -- 38,835,519(+) CTGGT(A/G)AGGTT intron-variant
rs114900418 -- 38,842,828(+) CCCAG(C/G)CTTTC upstream-variant-2KB
rs114200309 -- 38,835,799(+) TTTAC(A/C)CTGTT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for C17orf98 Gene

Variant ID Type Subtype PubMed ID
nsv833439 CNV Loss 17160897
nsv908199 CNV Loss 21882294

Relevant External Links for C17orf98 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C17orf98 Gene

Disorders for C17orf98 Gene

No disorders were found for C17orf98 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for C17orf98 Gene

Publications for C17orf98 Gene

  1. DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage. (PMID: 16625196) Zody M.C. … Nusbaum C. (Nature 2006) 2 3 4

Products for C17orf98 Gene

Sources for C17orf98 Gene

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