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Aliases for C17orf82 Gene

Aliases for C17orf82 Gene

  • Chromosome 17 Open Reading Frame 82 2 3

External Ids for C17orf82 Gene

Summaries for C17orf82 Gene

GeneCards Summary for C17orf82 Gene

C17orf82 (Chromosome 17 Open Reading Frame 82) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C17orf82 Gene

Genomics for C17orf82 Gene

Genomic Location for C17orf82 Gene

61,411,751 bp from pter
61,413,280 bp from pter
1,530 bases
Plus strand

Genomic View for C17orf82 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C17orf82 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C17orf82 Gene

Regulatory Elements for C17orf82 Gene

Proteins for C17orf82 Gene

  • Protein details for C17orf82 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative uncharacterized protein C17orf82
    Protein Accession:
    Secondary Accessions:

    Protein attributes for C17orf82 Gene

    251 amino acids
    Molecular mass:
    25393 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C17orf82 Gene

Proteomics data for C17orf82 Gene at MOPED

Post-translational modifications for C17orf82 Gene

No Post-translational modifications

Other Protein References for C17orf82 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C17orf82 Gene

Domains for C17orf82 Gene

Protein Domains for C17orf82 Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C17orf82: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C17orf82 Gene

Function for C17orf82 Gene

Gene Ontology (GO) - Molecular Function for C17orf82 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with C17orf82: view

Phenotypes for C17orf82 Gene

GenomeRNAi human phenotypes for C17orf82:
genes like me logo Genes that share phenotypes with C17orf82: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C17orf82 Gene

Localization for C17orf82 Gene

Subcellular locations from

Jensen Localization Image for C17orf82 Gene COMPARTMENTS Subcellular localization image for C17orf82 gene
Compartment Confidence
nucleus 3
cytosol 2
extracellular 1
peroxisome 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for C17orf82 Gene

Pathways for C17orf82 Gene

SuperPathways for C17orf82 Gene

No Data Available

Interacting Proteins for C17orf82 Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
Selected Interacting proteins: ENSP00000335229 Q86X59-CQ082_HUMAN for C17orf82 Gene via STRING UniProtKB

Gene Ontology (GO) - Biological Process for C17orf82 Gene


No data available for Pathways by source for C17orf82 Gene

Transcripts for C17orf82 Gene

mRNA/cDNA for C17orf82 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(4) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for C17orf82 Gene

Chromosome 17 open reading frame 82:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C17orf82 Gene

No ASD Table

Relevant External Links for C17orf82 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for C17orf82 Gene

mRNA expression in normal human tissues for C17orf82 Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for C17orf82 Gene

SOURCE GeneReport for Unigene cluster for C17orf82 Gene Hs.434459

genes like me logo Genes that share expressions with C17orf82: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for C17orf82 Gene

Orthologs for C17orf82 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for C17orf82 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia C17H17orf82 35
  • 98.78 (n)
  • 97.13 (a)
Species with no ortholog for C17orf82:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C17orf82 Gene

Gene Tree for C17orf82 (if available)
Gene Tree for C17orf82 (if available)

Paralogs for C17orf82 Gene

No data available for Paralogs for C17orf82 Gene

Variants for C17orf82 Gene

Sequence variations from dbSNP and Humsavar for C17orf82 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type MAF
rs730562 -- 61,411,132(-) CCCAC(A/C)CCACC upstream-variant-2KB
rs4459608 -- 61,413,669(+) GGAAA(A/C)CTGGA downstream-variant-500B
rs5821325 -- 61,411,010(+) CGCGG(-/G)AGGGG upstream-variant-2KB
rs8066348 -- 61,411,037(+) TGGGC(C/G)CGGGG upstream-variant-2KB
rs9905879 -- 61,412,461(+) CTCCC(A/G)CAGCT synonymous-codon, reference

Structural Variations from Database of Genomic Variants (DGV) for C17orf82 Gene

Variant ID Type Subtype PubMed ID
dgv43n68 CNV Loss 17160897
nsv518130 CNV Gain 19592680
nsv908663 CNV Loss 21882294
dgv3241n71 CNV Loss 21882294
dgv3242n71 CNV Loss 21882294

Relevant External Links for C17orf82 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C17orf82 Gene

Disorders for C17orf82 Gene

Relevant External Links for C17orf82

Genetic Association Database (GAD)
genes like me logo Genes that share disorders with C17orf82: view

No data available for UniProtKB/Swiss-Prot for C17orf82 Gene

Publications for C17orf82 Gene

  1. Identification of 15 loci influencing height in a Korean population. (PMID: 19893584) Kim J.J. … Lee J.K. (J. Hum. Genet. 2010) 3 48
  2. New loci associated with kidney function and chronic kidney disease. (PMID: 20383146) KAPttgen A. … Fox C.S. (Nat. Genet. 2010) 3
  3. Genome-wide association analyses identify 18 new loci associated with serum urate concentrations. (PMID: 23263486) KAPttgen A. … Gieger C. (Nat. Genet. 2013) 3
  4. A Y2H-seq approach defines the human protein methyltransferase interactome. (PMID: 23455924) Weimann M. … Stelzl U. (Nat. Methods 2013) 3
  5. Genome-wide meta-analysis identifies 11 new loci for anthropometric traits and provides insights into genetic architecture. (PMID: 23563607) Berndt S.I. … Ingelsson E. (Nat. Genet. 2013) 3

Products for C17orf82 Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate C17orf82
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat
  • Predesigned siRNA for gene silencing in human,mouse,rat for C17orf82
  • Block miRNA regulation of C17orf82 using miScript Target Protectors

Sources for C17orf82 Gene

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