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Aliases for C17orf67 Gene

Aliases for C17orf67 Gene

  • Chromosome 17 Open Reading Frame 67 2 3 5

External Ids for C17orf67 Gene

Previous GeneCards Identifiers for C17orf67 Gene

  • GC17M052225
  • GC17M054869
  • GC17M050230

Summaries for C17orf67 Gene

GeneCards Summary for C17orf67 Gene

C17orf67 (Chromosome 17 Open Reading Frame 67) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C17orf67 Gene

Genomics for C17orf67 Gene

Regulatory Elements for C17orf67 Gene

Genomic Location for C17orf67 Gene

Chromosome:
17
Start:
56,791,913 bp from pter
End:
56,838,773 bp from pter
Size:
46,861 bases
Orientation:
Minus strand

Genomic View for C17orf67 Gene

Genes around C17orf67 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C17orf67 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C17orf67 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C17orf67 Gene

Proteins for C17orf67 Gene

  • Protein details for C17orf67 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q0P5P2-CQ067_HUMAN
    Recommended name:
    Uncharacterized protein C17orf67
    Protein Accession:
    Q0P5P2

    Protein attributes for C17orf67 Gene

    Size:
    114 amino acids
    Molecular mass:
    13463 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAH93905.1; Type=Erroneous initiation; Evidence={ECO:0000305}; Sequence=AAH93907.1; Type=Erroneous initiation; Evidence={ECO:0000305};

neXtProt entry for C17orf67 Gene

Proteomics data for C17orf67 Gene at MOPED

Post-translational modifications for C17orf67 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C17orf67 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C17orf67 Gene

Domains & Families for C17orf67 Gene

Protein Domains for C17orf67 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C17orf67: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C17orf67 Gene

Function for C17orf67 Gene

genes like me logo Genes that share phenotypes with C17orf67: view

Animal Model Products

  • Taconic Biosciences Mouse Models for C17orf67

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C17orf67 Gene

Localization for C17orf67 Gene

Subcellular locations from UniProtKB/Swiss-Prot for C17orf67 Gene

Secreted.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C17orf67 Gene COMPARTMENTS Subcellular localization image for C17orf67 gene
Compartment Confidence
extracellular 4
cytosol 1
endoplasmic reticulum 1
mitochondrion 1
nucleus 1
plasma membrane 1

No data available for Gene Ontology (GO) - Cellular Components for C17orf67 Gene

Pathways & Interactions for C17orf67 Gene

SuperPathways for C17orf67 Gene

No Data Available

Interacting Proteins for C17orf67 Gene

Selected Interacting proteins: Q0P5P2-CQ067_HUMAN for C17orf67 Gene via UniProtKB

Gene Ontology (GO) - Biological Process for C17orf67 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for C17orf67 Gene

Drugs & Compounds for C17orf67 Gene

No Compound Related Data Available

Transcripts for C17orf67 Gene

mRNA/cDNA for C17orf67 Gene

Unigene Clusters for C17orf67 Gene

Chromosome 17 open reading frame 67:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C17orf67 Gene

No ASD Table

Relevant External Links for C17orf67 Gene

GeneLoc Exon Structure for
C17orf67
ECgene alternative splicing isoforms for
C17orf67

Expression for C17orf67 Gene

mRNA expression in normal human tissues for C17orf67 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

SOURCE GeneReport for Unigene cluster for C17orf67 Gene Hs.658949

genes like me logo Genes that share expression patterns with C17orf67: view

Primer Products

In Situ Assay Products

No data available for mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for C17orf67 Gene

Orthologs for C17orf67 Gene

This gene was present in the common ancestor of chordates.

Orthologs for C17orf67 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C17ORF67 36
  • 76 (a)
OneToOne
C17H17orf67 35
  • 98.52 (n)
  • 96.67 (a)
cow
(Bos Taurus)
Mammalia C17orf67 36
  • 71 (a)
OneToOne
C19H17orf67 35
  • 82.59 (n)
  • 85.56 (a)
dog
(Canis familiaris)
Mammalia C9H17orf67 35
  • 84.68 (n)
  • 91.89 (a)
C17orf67 36
  • 70 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm525 16
Gm525 36
  • 84 (a)
OneToOne
Gm525 35
  • 84.93 (n)
  • 93.15 (a)
chicken
(Gallus gallus)
Aves C18H17ORF67 35
  • 71.62 (n)
  • 70.27 (a)
C18H17ORF67 36
  • 65 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia C17orf67 36
  • 72 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia c17orf67 35
  • 67.41 (n)
  • 60 (a)
zebrafish
(Danio rerio)
Actinopterygii C6H17orf67 36
  • 53 (a)
OneToOne
Species with no ortholog for C17orf67:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for C17orf67 Gene

ENSEMBL:
Gene Tree for C17orf67 (if available)
TreeFam:
Gene Tree for C17orf67 (if available)

Paralogs for C17orf67 Gene

No data available for Paralogs for C17orf67 Gene

Variants for C17orf67 Gene

Sequence variations from dbSNP and Humsavar for C17orf67 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs192589 -- 56,811,905(-) TCTGG(C/G)AGAAA intron-variant
rs182270 -- 56,812,630(-) AACTC(C/T)TTCTT intron-variant
rs184045 -- 56,794,127(+) TAAAA(A/T)GGGGT intron-variant
rs184046 -- 56,822,453(-) GTTAA(A/G)AAATT intron-variant
rs184904 -- 56,809,971(-) gattg(C/T)gtgtg intron-variant

Structural Variations from Database of Genomic Variants (DGV) for C17orf67 Gene

Variant ID Type Subtype PubMed ID
nsv833495 CNV Loss 17160897
esv32884 CNV Loss 17666407
nsv908632 CNV Loss 21882294
esv2633698 CNV Deletion 19546169
esv1366533 CNV Insertion 17803354

Variation tolerance for C17orf67 Gene

Gene Damage Index Score: 1.18; 23.84% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for C17orf67 Gene

HapMap Linkage Disequilibrium report
C17orf67

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C17orf67 Gene

Disorders for C17orf67 Gene

Relevant External Links for C17orf67

Human Genome Epidemiology (HuGE) Navigator
C17orf67
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
C17orf67

No disorders were found for C17orf67 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C17orf67 Gene

Publications for C17orf67 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3 67
  2. Meta-analysis of genome-wide association studies of adult height in East Asians identifies 17 novel loci. (PMID: 25429064) He M. … Qi L. (Hum. Mol. Genet. 2015) 3
  3. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3
  4. Genetic determinants of height growth assessed longitudinally from infancy to adulthood in the northern Finland birth cohort 1966. (PMID: 19266077) Sovio U. … Jarvelin M.R. (PLoS Genet. 2009) 3

Products for C17orf67 Gene

Sources for C17orf67 Gene

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