Free for academic non-profit institutions. Other users need a Commercial license

Aliases for C17orf105 Gene

Aliases for C17orf105 Gene

  • Chromosome 17 Open Reading Frame 105 2 3

External Ids for C17orf105 Gene

Summaries for C17orf105 Gene

GeneCards Summary for C17orf105 Gene

C17orf105 (Chromosome 17 Open Reading Frame 105) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C17orf105 Gene

Genomics for C17orf105 Gene

Genomic Location for C17orf105 Gene

Start:
43,780,435 bp from pter
End:
43,787,612 bp from pter
Size:
7,178 bases
Orientation:
Plus strand

Genomic View for C17orf105 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C17orf105 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C17orf105 Gene

No data available for Regulatory Elements for C17orf105 Gene

Proteins for C17orf105 Gene

  • Protein details for C17orf105 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    B2RV13-CQ105_HUMAN
    Recommended name:
    Uncharacterized protein C17orf105
    Protein Accession:
    B2RV13
    Secondary Accessions:

    Protein attributes for C17orf105 Gene

    Size:
    164 amino acids
    Molecular mass:
    19546 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C17orf105 Gene

Proteomics data for C17orf105 Gene at MOPED

Post-translational modifications for C17orf105 Gene

No Post-translational modifications

Other Protein References for C17orf105 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C17orf105 Gene

Domains for C17orf105 Gene

Protein Domains for C17orf105 Gene

InterPro:
ProtoNet:
genes like me logo Genes that share domains with C17orf105: view

No data available for Gene Families and UniProtKB/Swiss-Prot for C17orf105 Gene

Function for C17orf105 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C17orf105 Gene

Localization for C17orf105 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C17orf105 Gene COMPARTMENTS Subcellular localization image for C17orf105 gene
Compartment Confidence
cytosol 2
nucleus 2
mitochondrion 1
peroxisome 1

No data available for Gene Ontology (GO) - Cellular Components for C17orf105 Gene

Pathways for C17orf105 Gene

SuperPathways for C17orf105 Gene

No Data Available

Interacting Proteins for C17orf105 Gene

Gene Ontology (GO) - Biological Process for C17orf105 Gene

None

No data available for Pathways by source for C17orf105 Gene

Transcripts for C17orf105 Gene

Unigene Clusters for C17orf105 Gene

Chromosome 17 open reading frame 105:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C17orf105 Gene

No ASD Table

Relevant External Links for C17orf105 Gene

GeneLoc Exon Structure for
C17orf105
ECgene alternative splicing isoforms for
C17orf105

Expression for C17orf105 Gene

mRNA expression in normal human tissues for C17orf105 Gene

mRNA differential expression in normal tissues according to GTEx for C17orf105 Gene

This gene is overexpressed in Testis (48.0).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for C17orf105 Gene

SOURCE GeneReport for Unigene cluster for C17orf105 Gene Hs.252707

genes like me logo Genes that share expressions with C17orf105: view

Orthologs for C17orf105 Gene

This gene was present in the common ancestor of chordates.

Orthologs for C17orf105 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C17H17orf105 36
  • 99.19 (n)
  • 99.39 (a)
C17orf105 37
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia C17orf105 37
  • 90 (a)
OneToOne
C19H17orf105 36
  • 90.45 (n)
  • 90.24 (a)
dog
(Canis familiaris)
Mammalia C17orf105 37
  • 90 (a)
OneToOne
C9H17orf105 36
  • 91.67 (n)
  • 90.24 (a)
mouse
(Mus musculus)
Mammalia 1700006E09Rik 36
  • 87.8 (n)
  • 85.98 (a)
1700006E09Rik 16
1700006E09Rik 37
  • 86 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia C17orf105 37
  • 48 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia C17orf105 37
  • 29 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia RGD1565533 36
  • 86.59 (n)
  • 87.2 (a)
chicken
(Gallus gallus)
Aves C17orf105 37
  • 35 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia C17orf105 37
  • 40 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii C25H17orf105 (1 of 2) 37
  • 23 (a)
OneToMany
C9H17orf105 (2 of 2) 37
  • 22 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 37
  • 27 (a)
OneToOne
Species with no ortholog for C17orf105:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for C17orf105 Gene

ENSEMBL:
Gene Tree for C17orf105 (if available)
TreeFam:
Gene Tree for C17orf105 (if available)

Paralogs for C17orf105 Gene

No data available for Paralogs for C17orf105 Gene

Variants for C17orf105 Gene

Sequence variations from dbSNP and Humsavar for C17orf105 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type MAF
rs2301683 -- 43,783,387(+) TCCCT(A/G)AACAG intron-variant
rs4792915 -- 43,782,338(+) CTCAC(A/G)GGGCA intron-variant
rs4792916 -- 43,782,437(+) CCTTC(A/G)TGGTT intron-variant
rs4793029 -- 43,782,355(+) GAAAG(A/G)GGCTT intron-variant
rs7215012 -- 43,784,316(+) ACACT(C/T)AGGCG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for C17orf105 Gene

Variant ID Type Subtype PubMed ID
nsv908265 CNV Gain 21882294
nsv908267 CNV Gain 21882294
esv27934 CNV Gain 19812545

Relevant External Links for C17orf105 Gene

HapMap Linkage Disequilibrium report
C17orf105

Disorders for C17orf105 Gene

No disorders were found for C17orf105 Gene.

No data available for UniProtKB/Swiss-Prot for C17orf105 Gene

Publications for C17orf105 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4

Products for C17orf105 Gene

Sources for C17orf105 Gene

Back to Top

Content