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Aliases for C17orf100 Gene

Aliases for C17orf100 Gene

  • Chromosome 17 Open Reading Frame 100 2 3
  • Uncharacterized Protein C17orf100 3
  • HCG1985469 3

External Ids for C17orf100 Gene

Previous GeneCards Identifiers for C17orf100 Gene

  • GC17P006497
  • GC17P006564

Summaries for C17orf100 Gene

GeneCards Summary for C17orf100 Gene

C17orf100 (Chromosome 17 Open Reading Frame 100) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C17orf100 Gene

Genomics for C17orf100 Gene

Regulatory Elements for C17orf100 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for C17orf100 Gene

6,651,718 bp from pter
6,653,473 bp from pter
1,756 bases
Plus strand

Genomic View for C17orf100 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C17orf100 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C17orf100 Gene

Proteins for C17orf100 Gene

  • Protein details for C17orf100 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Uncharacterized protein C17orf100
    Protein Accession:
    Secondary Accessions:

    Protein attributes for C17orf100 Gene

    164 amino acids
    Molecular mass:
    18001 Da
    Quaternary structure:
    No Data Available
    • Sequence=BC038956; Type=Frameshift; Positions=104; Evidence={ECO:0000305};

neXtProt entry for C17orf100 Gene

Proteomics data for C17orf100 Gene at MOPED

Post-translational modifications for C17orf100 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C17orf100 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for C17orf100 Gene

Domains for C17orf100 Gene

Protein Domains for C17orf100 Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C17orf100: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C17orf100 Gene

Function for C17orf100 Gene

Animal Model Products

CRISPR Products

miRNA for C17orf100 Gene

miRTarBase miRNAs that target C17orf100

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for C17orf100 Gene

Localization for C17orf100 Gene

Subcellular locations from

Jensen Localization Image for C17orf100 Gene COMPARTMENTS Subcellular localization image for C17orf100 gene
Compartment Confidence
nucleus 3

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for C17orf100 Gene

Pathways for C17orf100 Gene

SuperPathways for C17orf100 Gene

No Data Available

Interacting Proteins for C17orf100 Gene

Gene Ontology (GO) - Biological Process for C17orf100 Gene


No data available for Pathways by source for C17orf100 Gene

Transcripts for C17orf100 Gene

mRNA/cDNA for C17orf100 Gene

(57) Selected AceView cDNA sequences:
(1) REFSEQ mRNAs :
(5) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for C17orf100 Gene

Chromosome 17 open reading frame 100:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for C17orf100

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for C17orf100 Gene

No ASD Table

Relevant External Links for C17orf100 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for C17orf100 Gene

mRNA expression in normal human tissues for C17orf100 Gene

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for C17orf100 Gene

SOURCE GeneReport for Unigene cluster for C17orf100 Gene Hs.262480

genes like me logo Genes that share expressions with C17orf100: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Expression partners for C17orf100 Gene

Orthologs for C17orf100 Gene

This gene was present in the common ancestor of mammals.

Orthologs for C17orf100 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia C19H17orf100 35
  • 82.77 (n)
  • 67.8 (a)
(Mus musculus)
Mammalia 4930563E22Rik 35
  • 79.58 (n)
  • 72.07 (a)
4930563E22Rik 16
(Pan troglodytes)
Mammalia C17H17orf100 35
  • 98.87 (n)
  • 98.31 (a)
(Rattus norvegicus)
Mammalia LOC100912483 35
  • 77.4 (n)
  • 66.95 (a)
Species with no ortholog for C17orf100:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C17orf100 Gene

Gene Tree for C17orf100 (if available)
Gene Tree for C17orf100 (if available)

Paralogs for C17orf100 Gene

No data available for Paralogs for C17orf100 Gene

Variants for C17orf100 Gene

Relevant External Links for C17orf100 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for C17orf100 Gene

Disorders for C17orf100 Gene

No disorders were found for C17orf100 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for C17orf100 Gene

Publications for C17orf100 Gene

  1. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4
  4. DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage. (PMID: 16625196) Zody M.C. … Nusbaum C. (Nature 2006) 4

Products for C17orf100 Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate C17orf100
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat
  • Predesigned siRNA for gene silencing in human,mouse,rat for C17orf100
  • Block miRNA regulation of C17orf100 using miScript Target Protectors

Sources for C17orf100 Gene

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